Lsab003442.1
Basic Information
- Insect
- Lissocephala sabroskyi
- Gene Symbol
- Mblk-1
- Assembly
- GCA_037075105.1
- Location
- JBAMCP010000433.1:24725-38768[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.9e-13 1.6e-09 37.9 0.0 1 42 203 245 203 247 0.91 2 2 9.9e-19 2.3e-15 56.6 0.0 1 43 667 710 667 712 0.95
Sequence Information
- Coding Sequence
- ATGGCCAGGTGGGCGATGGGCCAAAACCACAACGGACTTGGCCTCCTCCACTCCGCTGGCAGCGAGCAGTCAGTCCATCAAttGGACAGTGACAGCAACTCGAGCGCATCGCtctacaactacaacaacaacagcagcagcagcagggccaaATTGCGAGCGGCCAAacgcacaacaacagcaacaacagcgggggcagcaacggcggcccaaaaagcggccgccccgccagcggcgaattcaattgaactttACAAACTGCTGACCCAACATTCGGCCAAAATGACATCCATGGATCCGATGGCCGCTCAACTGGCTGCCATACAATCCTTCTCGGATTTGCGTACAAACTTCAACTTGATCAACTCGCTGGCgaaccatcagcagcagcagcagcagcatatAAACTCGGTAACGCCAACTACCTCAGAAGTATCGGTGGCCGCAATCAGTCCAGCACTCAAAGACACGCCGAGTCCCAGTGCCGATGCACCGTTAGATCTTAGTTCCAAGCCATCACCAAATTCATCGATTAGCGGCGATCTGAAGTCAGTCAGGACAATATCGGAATGCGCCACACCGATACCGTCGGCCAGGCGGAGCTACAGCGAAGAGGATCTTAACAGCGCCTTGCAGGATGTGCTGGCCAACAAGCTGGGCACCCGCAAGGCCGCCAGCCAATACAACGTGCCCCGCTCCACGCTGCGCAACAAACTCTACAAGCTCAGCATGAACGCCCAAGCACCCGGCGAGCTCCAGCACCTCCTCGACCTGGAACAGGACGAGTCCGGCGACGAGagcggcgccagcaacaactccACCCCGGCCCCCACGCCCGCGGCCTTTCCAGACTTTGCCCAGCGCATTGCGGCCTCGGCCCAGCTGCGCAAGCTCAGCCAAATGTCCGAGAACAATGGCAGCGACTTGGGCGAGGATCTGGAGCAGGCCATGTCGCCGCGCCTGCCCAGCTCTACGCCCACGGGAAGCAGCGGagggccgggcggcggcataGACGCCAATGTCTTGCTCCACACGCTGATGCTGGCCGCAGGGATTGGGGTGATGCCCAAGCTGGACGAGACCCAGACTCTGGGCGAACTGGTGAAGACGCTGTTCCTGGCCAATAGCGGCAGCATCATCAACGAGGCGCTGACCGTGGCCGCCAATGCGGCCGTGGCAGCGGCCGACAATTCCTCGGCCGTGCTGCAGAATGGCTCGGCGGCCGGGGGACTGATTGAccagcgattgttgctgcagcagctgcagcaccagcagcaccagcagcaacatcagcagcagcaacagcagcaactcaaTGCCGTGGGCTTTCGGCATCGCTTACCAAAGTCTGATACGCCGGAGACGAATTCATCGCTGGATCCTAACGAGTCCTGCGATGATCCCATACTAAAGATTCCGTCCTTCAAGGTGAGCGGGGCGGCCAGTGTGTCGCCCTCGCTGATGGGGGCCgccagccacaacaacaacaactcgaacTGCAGCGCCAACCGCAACGGCGGCGACCAGAGCCCCCACTCGGCCTCGCCTATGCTGGCCgcggcagtggctgctgccgccaacaacagctACCGGCAGAGCGGCAATCTGCTgtcgccctcgcccacctcCATACAGAAGATGATGGCCAACACCATCCAGCGCAAGATCAGCGAGCAGACCGGCCAggacctgctgggcctggcaGGGGACTCGAAgcgcaacaacggcaacaccagcggcagcgagtgcagcagcagcagcggtgcccccgggggcagcggcgcggccggcggcagctacAAGAAGCCCAGCATCTCAGTGGCCAAAATGATAGGCGGCACGGACACCACGCGCTTTGGTGCCTCCCCCAATGTCCTGGCCCAGCCCCACCATGCCCACCTGCCGCCCCACCATGCCCACCAGCTGAGCGCCCAGGAGGcagccgccctggccgccaaCAAGGGCACGCGGCCCAAGCGCGGCAAGTACCGCAACTACGACCGCGACAGCCTCGTCGAGGCGGTCAAGGCGGTCCAGCGCGGCGAGATGTCTGTCCACCGGGCGGGCAGTTACTACGGAGTCCCCCACTCCACCCTCGAGTACAAGGTCAAGGAGCGGCACTTGATGAGGCCGCGCAAGCGCGAGCCGAAGCCTCAACCCGCCCTAGCCGGGCTCACGGGGGCGGCCAACAAGGTGAATGCCAATATGGGCGGCCTCAACCACCTGGACAAGCTGAAGGCCAGCGGGTCCGCCAGTTCCGGCTCCAAGCTGAGCAATGCCCtcaagagcagcagccaggcgccggcggctgccggggCCCCTCCAAATGGCATGAAGCTGCCCATGTTcgatccagccagccagctgagctACCAGCAGAATATGTTCTGGTCGGGGAATGCCAACTACGGGCTGGACTTCAACCGCAGCCCGGACTTCCTGAAGACTCACCTGGCGCGGCTGAATGCAGCCGGGGCGGCCGGCACTAGCAATGCGCTGAGTGTCCCCGGCAATCATCAGGGCGGAGTGCCGCCCATGAAAAGCGCCTTGGACTTCACCGAGCACATGTACGATGGCATAATCCGCAAGACTCTGAAGAGCAGCGCGGCCGGCTCGGAGGTGGGAGGCGGCAATGGCACTGCTTTGCtggaccagctgctggtgaAGAAGACTCCGCTGCCGTTCACCAACAATCGCAGCAATGACtacgcggcggcggcggctggctgctCCACGACggacctgctgctgggcagcggcaagcGGTCGGGCAGCCCAATGGCTGTGTATGCGGATATCAAAAGGGAGCGGGCCAGCCCGGGCGGTGAGAGTGgcagcagcgaggacgagCATGGCCAtgcgagcaacaacaacaacaacagcgagatGACGCACAACAAGAatagcagcagcggcggcggcggtcaatgcaacaacggcagcaacaacaacggccgcaGCCGGATGACCTCCCGCGACTCGGAGACCGATGCCAGCAGCTTGAAGAGCGAGCATTCccgcagccccgccgcccacagcaacaaaatgatgGATCTCAACGGCAGCCTcaagctggaggaggaagTCCAGCTGCCGAGCTCGTCCATACTGCACGAGAAGCTGGCCCAGATCAAGGCCGAGCAGGCGGACTGCCCGGCTGCCGACGAGCACTTATAG
- Protein Sequence
- MARWAMGQNHNGLGLLHSAGSEQSVHQLDSDSNSSASLYNYNNNSSSSRAKLRAAKRTTTATTAGAATAAQKAAAPPAANSIELYKLLTQHSAKMTSMDPMAAQLAAIQSFSDLRTNFNLINSLANHQQQQQQHINSVTPTTSEVSVAAISPALKDTPSPSADAPLDLSSKPSPNSSISGDLKSVRTISECATPIPSARRSYSEEDLNSALQDVLANKLGTRKAASQYNVPRSTLRNKLYKLSMNAQAPGELQHLLDLEQDESGDESGASNNSTPAPTPAAFPDFAQRIAASAQLRKLSQMSENNGSDLGEDLEQAMSPRLPSSTPTGSSGGPGGGIDANVLLHTLMLAAGIGVMPKLDETQTLGELVKTLFLANSGSIINEALTVAANAAVAAADNSSAVLQNGSAAGGLIDQRLLLQQLQHQQHQQQHQQQQQQQLNAVGFRHRLPKSDTPETNSSLDPNESCDDPILKIPSFKVSGAASVSPSLMGAASHNNNNSNCSANRNGGDQSPHSASPMLAAAVAAAANNSYRQSGNLLSPSPTSIQKMMANTIQRKISEQTGQDLLGLAGDSKRNNGNTSGSECSSSSGAPGGSGAAGGSYKKPSISVAKMIGGTDTTRFGASPNVLAQPHHAHLPPHHAHQLSAQEAAALAANKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPALAGLTGAANKVNANMGGLNHLDKLKASGSASSGSKLSNALKSSSQAPAAAGAPPNGMKLPMFDPASQLSYQQNMFWSGNANYGLDFNRSPDFLKTHLARLNAAGAAGTSNALSVPGNHQGGVPPMKSALDFTEHMYDGIIRKTLKSSAAGSEVGGGNGTALLDQLLVKKTPLPFTNNRSNDYAAAAAGCSTTDLLLGSGKRSGSPMAVYADIKRERASPGGESGSSEDEHGHASNNNNNSEMTHNKNSSSGGGGQCNNGSNNNGRSRMTSRDSETDASSLKSEHSRSPAAHSNKMMDLNGSLKLEEEVQLPSSSILHEKLAQIKAEQADCPAADEHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -