Lsab007241.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lissocephala sabroskyi
Gene Symbol
ct
Assembly
GCA_037075105.1
Location
JBAMCP010001239.1:1-18971[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.4e-27 6.7e-23 81.1 0.0 3 72 519 589 517 594 0.95
2 3 2.4e-32 6.6e-28 97.2 0.0 3 77 961 1036 959 1038 0.96
3 3 1.4e-31 3.8e-27 94.7 0.0 3 77 1235 1310 1233 1312 0.96

Sequence Information

Coding Sequence
cgcctgcgcggccTCGAGCAGACGCATCTGGTGCAGATCCAGCGGTTGGAGGAGCACTTGGAGGTGAAGCGCCAGCACATCATGAGACTGGAGGCGCGGCTGGACAAGCAGCAGATCAACGAGGCTCTGGCCGAGGCTACGGccttggccgctgctgccgcggtggctgcggtggccaacaacaacaacaacagcagcagcaacgacaacaacaacaagctgGACAGCGAAATCGAGGCCGGCGGCAACATCGATTTGACGCTCAGCAAATTGACTGAGCTGCCGtcggcagcggccggcgctgcccaggatgaggaggacgaggagctggaggacgAGCGGTTGGctgacaacgacagcagccgccgacgtgccaccgacgaggaggacgaggacgaagaagaagccgaTGCCGAAATGTTGCCCGCCACCGACTCAGccagcgaaatgaaaatcaaaaaggagcagcaCAGCCCCTTGGATCTGAATGTGCTCAGTCCGCAGTCGGCGatcgccgcagccgcggccgctgctgccgccgctgcctgcgccAACGATCCCAACAAATTCCAGGCCCTGCTGATTGAACGCACCAAGGCTTTGGCCGCCGAGGCGCTCAAGAACGGAGCTGTCAGCGATGCCACCGCTCCCAGCAGTGAAGATGGcaacccgccgcccgccgggctgcaccaccaccagcaccacctgcagcaccaccagcagccacagacgccccaccagccgcagtcgctaggcagcagcagcagcagcaatggcagcagcagcaacaacaacaaccctacaaccaccgccagcagcagcaacaacaacaccaccagcaacaccagcagcagccagctcaccagcagcaacaacgccggcgctgccaacaacaacaacaccaacaacatttCGTCCTCCAGCCCcgaggcagccgcggccgcagccgcagccttgGCCctcaaccaccaccaccatggccaccaccacggccatcACCATGGCCATCATTCAgtggccgcagcagccgctgccgccgctgcagccgccgcagccgcccatCATTCCCATcacctggccggcggcgactcGAACTCCTCCAGCGCCAACAGCACCCCCAACCCGGCCAGCAATGCCAgtggggcagccgccgcccagctggccgccaGCATAGCCAGCACCCTCAACGGCAGCAAGTCGCTGCtccaggccgcggccgccgctgccgccgccgaggacaacaacaacagcctggCGCCGAATGCCaatgcagctgccgccgcggccgccatggccgcccaTGCCCAGCATGCGCATGCCGCTGCCCTGGGGGCCCCTGCATTCCTGCCCAACCTGCCGGCCTTTCAGTTtgccgcggcggcagccgccagccaggacGGCCGGGGTCATTACCGCTTTGCCGACGCGGAGCTGCAGTTGCCGCCGGGCGCCTcgatggctggccggctgggcgagtCGCTTATACCCAAAGGCGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTATGCCAATCAGGCGCTGGACACGCTGCACATCTCGCGGCGCGTGAGGGAGCTGCTGTCGGTGCACAACATTGGCCAGCGGCTGTTCGCCAAGTACATTTTGGGGTTGTCGCAGGGGACGGTGTCCGAGTTGCTGAGCAAGCCGAAGCCGTGGGACAAGCTGACGGAGAAGGGACGGGACAGCTACCGCAAGATGCATGCCTGGGCGTGCGATGATAACGCCGTCATGCTGCTCAAATCCCTCATACCCAAGAAAGATTCGGGACTGCCGCAGTACGGCGgcgggcgcggcggcggcggcgacgactcGATGTCCGAGGACCGCATCGTCCACATTCTGAACAGCGCCGtccaagagcagcagcggcgcgcCTCGGCCCACGGCGAGGAGACGCACAGCAACGAGGACAGCAAGTCGCCGCCGCAGACCTGCACCTCGCCCTTCTTCAAGGTGGAGCAGATGAAGCAGGAGCAGCACCAGCTGCCggggcaccaccaccagcagcagcagcagcagcgcgagcgggagcaccagcagcgccaggagcagcagcagcagcgcctgcggcACGAGGACGCAGCCACCGACAAGATGGCCCGTCTCTACCAGGAGATCATGGCCCGCACTCCCCGCGAGTCGGCCTTTCCCAGCTTCCTGTTGAATCCTTTCTTTGGCGGGGCAGCTGGGATGCCCGGGGCCGGGAATCCCTTCCCGGGGGCCGGCATGGCCGGCGACGAGAACATGCGCCATGTCTTTGAGCGCGAGATAgccaagctgcagcagcagcaccagcagcagcagcagcaacaacagcagcaacagcagcagcaacaggcggcCGCCGGCTTCCCCAACTTCAGCAGCTTGatggccctgcagcagcaggtgcTGAACGGGGCCCAGGACTTGTCCACGGGCAAAGATCTGCTCAAGGACATCAAGGTGAATGGCCAGCGCTCTTCTTTGGACGGCAGCTCGAAGGATCTGGACGACAGCGGCATTCCTTTGATGGCCCGCAAATCAGAGCCTGGCAGTTCGAACTCAACCAGCGGCAATGGCACTGGCACTCCTgcgcccccagccccgcccagcagcaatGCCTCGGCCCAGCACACGAGCAACTcggccgcccccagccccttgAGCAACTCGATTCTGCCGCCAGTGCTGAGCCAGGGCGACGAgttcgccgccaccgccagcccctTGCAGCGCATGGCCTCGATCACGAACTCGCTGATCACCCAGCCGCCCGTGACCCCCCACCACTCGCAGCCCCAGCGGCCCACCAAGGCCGTCCTGCCGCCCATCACCCAGCAGCAGTTCGACATGTTCAACAACCTCAACACCGAGGACATCGTGCGCCGCGTCAAGGAGGCCCTCTCCCAATATTCCATCTCTCAAAGGCTCTTCGGCGAATCTGTGCTCGGCCTGTCGCAGGGCTCTGTGTCGGATCTGCTGGCCCGCCCCAAGCCCTGGCACATGCTCACCCAGAAGGGCCGCGAGCCCTTCATCCGCATGAAGATGTTCCTCGAGGACGAGAACGCCGTGCACAAGCTCGTGGCCAGCCAATACAAGATCGCCCCCGAGAAGCTCATGCGCACGGGCAGCTACAGCGGCAGCCCCCAGATCCCccagggcctggccaacaagatgcaggccgccgccctgccCATGCAGAAGATGATGAACGAGCTGAAACTCCAAGagcccgcccaggcccagcacaTCATGCAGCAGATgcaggccgccgcggccaTGTCGGCCGccatgcaacagcagcaggcagccgcggccgcggccgctgcagccgcccagcagcagagccaacaacagcacgcggcagccgctgcggccgccctGCATCACCAGAACATGCTGCTGACCTCGCCAGGGCTGCCGCCCCAGCATGCCATCAgcctgccggctgccagcGGCACGCCCGGCGGTCCGCCTGGCGGCAACACCGGCGGCCCGGGCAGCGTTGGTTCGGGAAGCGGCGGGGCAAGCAGCAACCCTGGCGGGCCTTCGCCGGCAGCCGGGCTGGGCGACAAGAAGCCCATGATGATGCCCGTGCATGGCGGCCATGCCCCGAATGCCATGCGCAGCCTCCACCAGCACATGTCGCCGACGGTTTATGAAATGGCCGCCCTCACCCAGGACCTGGACACCCACGACATCACCACCAAGATCAAGGAggccctgctggccaacaacataGGCCAGAAGATCTTCGGCGAGGCCGTGTTGGGCCTGTCCCAGGGCTCGGTGTCCGAGCTGCTGAGCAAGCCCAAGCCCTGGCACATGCTGTCGATCAAGGGCCGCGAGCCCTTCATACGCATGCAGCTGTGGCTGAGCGACGCCAACAACGTGGAGCGGCTGCAGGTGCTGAAGAACGAGCGGCGGGAGGCCAGCAAGCGCCGGCGCAGCACTGGGCCCAACCAGCAGGACAACAGCTCGGACACTTCCAGCAACGACACCAACGACTTCTACACCAGCAGCCCGGGCCCGGGCTCCGTGGGCTCCTCGGTGAGCGGGGCCCCGCCCAACAAGAAGCAGAGGGTCTTGTTCTCCGAAGAGCAGAAGGAGGCCCTGCGCCTGGCCTTTGCCCTGGATCCTTATCCCAACATGAGCACCATTGAGTTTCTGGCCAATGAGTTGGGTTTGGCCACGCGGACCATCACGAATTGGTTCCACAACCACCGCATGCGGCTGAAGCAGCAGGTGCCGCACGGCCAGCCGGGGGCGGACAATCCCATTCCGAGTCGCGAGAACACCAACGCCACGCCCTTCGATCCCGTCCACTTCCGGAtcctgctgcagcagcggctggtCGACCTGCACAAGGAGCGCATGGGCCTCAGCGGGGCCCCCATTCCCTATCCGCCGTACTTTGCCGCGGCTGCCCTGCTGGGCcgcagcctggccggcatacccggggcggcggcagcggccggggcagcggctgcggctgctgcggcggctggcgtGGCCGGCGAGAATGAGCTGCAGGCCCTCAACCAGGCCTTCAAGGAGCAGATGAGCGGCCTGGACTTGTCCATGTCGACGCTGAAGCGCGAGCGCAGCGATGACTACCAGGACGACCTGGACGGCCACAACCTCAGCGACAATGAATCTTTGGAGGGCCAGGATGCCGATGACAAGTCCAGCGCGGCCTCGGTCTCGGACTATGAGAAGGTCATGCAGAAGTCGCTGGcctcggcggctgccgcctACATGAGCAATGCGGTGAGGAGCTCGCGGCGCAAGCCGGCGGCCCCGCAGTGGGTCAAcccggcggccaccagcactccgctgggcggccagctgacCGCGGGCACTGAGGCAGCCAACGAGCGGATAATCAATGGAGTGTGCGTGATGCAGCCCTCGGAGTATGGCGGCCGGGATGAGGGCGAGGCCGAGGGCCCGGGCGAGGGCAAGGCGGCCAGCGTGTCGGCCGCGGGCAGCGAGGCCGGCGACGGCCAGGGCCACTTGGAGATCGACCAGCGGTTCATGGAGCCGGAGGTGCGCATCAagcaggaggaggacgacgaggaggaggaggagctccACGAGGAGCACGAGTCCAGCGAGGACCACAAGCTCAAGGTGATCAACGAGGAGAAGCTTCGCTTGGTCCGCGTGCGGCGGCTGAGCAGCAATGGCCCCGCCGACGAGGCGCTTccagctgcggcggccgcaggGAATCCGGCTGGTCCGACGCCCACAGCGGCGTGGAACTACTAA
Protein Sequence
RLRGLEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAAAVAAVANNNNNSSSNDNNNKLDSEIEAGGNIDLTLSKLTELPSAAAGAAQDEEDEELEDERLADNDSSRRRATDEEDEDEEEADAEMLPATDSASEMKIKKEQHSPLDLNVLSPQSAIAAAAAAAAAAACANDPNKFQALLIERTKALAAEALKNGAVSDATAPSSEDGNPPPAGLHHHQHHLQHHQQPQTPHQPQSLGSSSSSNGSSSNNNNPTTTASSSNNNTTSNTSSSQLTSSNNAGAANNNNTNNISSSSPEAAAAAAAALALNHHHHGHHHGHHHGHHSVAAAAAAAAAAAAAAHHSHHLAGGDSNSSSANSTPNPASNASGAAAAQLAASIASTLNGSKSLLQAAAAAAAAEDNNNSLAPNANAAAAAAAMAAHAQHAHAAALGAPAFLPNLPAFQFAAAAAASQDGRGHYRFADAELQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYGGGRGGGGDDSMSEDRIVHILNSAVQEQQRRASAHGEETHSNEDSKSPPQTCTSPFFKVEQMKQEQHQLPGHHHQQQQQQREREHQQRQEQQQQRLRHEDAATDKMARLYQEIMARTPRESAFPSFLLNPFFGGAAGMPGAGNPFPGAGMAGDENMRHVFEREIAKLQQQHQQQQQQQQQQQQQQQAAAGFPNFSSLMALQQQVLNGAQDLSTGKDLLKDIKVNGQRSSLDGSSKDLDDSGIPLMARKSEPGSSNSTSGNGTGTPAPPAPPSSNASAQHTSNSAAPSPLSNSILPPVLSQGDEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMQAAALPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQAAAAAAAAAAQQQSQQQHAAAAAAALHHQNMLLTSPGLPPQHAISLPAASGTPGGPPGGNTGGPGSVGSGSGGASSNPGGPSPAAGLGDKKPMMMPVHGGHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVSGAPPNKKQRVLFSEEQKEALRLAFALDPYPNMSTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPGADNPIPSRENTNATPFDPVHFRILLQQRLVDLHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAAGVAGENELQALNQAFKEQMSGLDLSMSTLKRERSDDYQDDLDGHNLSDNESLEGQDADDKSSAASVSDYEKVMQKSLASAAAAYMSNAVRSSRRKPAAPQWVNPAATSTPLGGQLTAGTEAANERIINGVCVMQPSEYGGRDEGEAEGPGEGKAASVSAAGSEAGDGQGHLEIDQRFMEPEVRIKQEEDDEEEEELHEEHESSEDHKLKVINEEKLRLVRVRRLSSNGPADEALPAAAAAGNPAGPTPTAAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00904658;
90% Identity
iTF_00904658;
80% Identity
iTF_00904658;