Lsab008873.1
Basic Information
- Insect
- Lissocephala sabroskyi
- Gene Symbol
- kn
- Assembly
- GCA_037075105.1
- Location
- JBAMCP010001810.1:4354-6923[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-119 6.7e-116 388.5 0.0 205 385 1 210 1 213 0.99 2 2 7e-08 0.00039 19.5 15.6 422 523 213 314 209 330 0.69
Sequence Information
- Coding Sequence
- ATGCGCAGATTTCAGGTTGTCGTGTCCACGCAGGTGGCCGTAGACGGACCATTGCTGGCCATATCGGACAATATGTTCGTGCACAACAATTCGAAGCACGGGCGGCGAGCCAAGCGATTGGACACCACGGAAGGTACAGGCAACAACTCCCTGTCCTTATCCGGTCACCCCCTAGCGCCAGACAGTACCTACGATGGTCTCTATCCCCCCTTGCCCGTGGCCACGCCCTGCATCAAGGCGATATCGCCCAGCGAGGGCTGGACCACCGGCGGCGCCACAGTCATCATCGTGGGCGACAACTTCTTCGACGGCCTGCAGGTGGTCTTCGGCACGATGCTGGTGTGGAGCGAGCTGATCACCTCCCATGCCATCCGAGTGCAGACGCCGCCCCGGCACATACCCGGGGTGGTGGAGGTGACGCTCTCGTATAAGAGCAAGCAGTTCTGCAAGGGGTCGCCGGGCCgctttgtttatgtttCAGCCCTCAACGAGCCCACGATCGACTATGGTTTCCAGCGCCTGCAGAAGTTGATTCCCCGGCATCCCGGCGATCCAGAGAAGCTCCAGAAAGAGATCATCCTGAAGCGAGCAGCGGACCTGGTGGAGGCGCTCTACTCCATGCCCAGGTCACCCGGCGGCTCGACGGGCTTCAATTCGTatgccggccagctggcggtcAGCGTCCAGGACGGCACTGGCCAGTGGACCGAGGACGACTACCAGCGCGCCCAGTCCAGCAGCGTGAGTCCTCGCGGCGGCTACTGCAGCAGCGCGTCGACGCCGCACAGTTCCGGTGGCTCCTACGGAGCCACAGCAGCcacggcggccgtggcggccacggccaacggCTATGCACCCACGGCCAACATGGGCACCCTGTCGTCCTCGCCGAGCAGCGTCTTCAACTCCACATCAATGTCCGTATCGTCGACCTGGCACCAGGCTCTCGTCCAGCATCACCACGCGGCCACCTCCACCCATCCGCATCACTATCCGCATCCCCACCAGCCGTGGCACAAtccggcggtggcagcagcaacagcggcagccgtTTAG
- Protein Sequence
- MRRFQVVVSTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNNSLSLSGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDGTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATAATAAVAATANGYAPTANMGTLSSSPSSVFNSTSMSVSSTWHQALVQHHHAATSTHPHHYPHPHQPWHNPAVAAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00600097;
- 90% Identity
- iTF_00510322;
- 80% Identity
- -