Lsab010254.1
Basic Information
- Insect
- Lissocephala sabroskyi
- Gene Symbol
- Arid2
- Assembly
- GCA_037075105.1
- Location
- JBAMCP010002524.1:4958-10014[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-25 1.4e-21 77.3 0.0 2 89 73 159 72 159 0.93
Sequence Information
- Coding Sequence
- ATGAATACAATTGACAATGTGCGCGTCCTCCTACAAGCCTTGCCGCCGGGTGTCGGcttcggccagcagccgccgccgctgccgcatcAGCCCAACGACTTGGGGACACCTTTGCGCGCCAGAATcagcctccagcagcaacCCACCCCGGCCTCCCAGCCGCTCCTCGGCACTCCCGAGAAGTCCGGCGGCAAGCACATGACAACCCTCAAAGCCCCCGAGGAATTCTGGCGAGACTTGCATCAATTTCACGAACGACGCGGCACGCCTTTAACCCAGGCGGCCAAGATCAGCGGCCAGCGGGTGGACCTCTACAAGCTCTACAACGAGGTCACCGATCGCGGCGGCTTCAACAAGGTCAACATGCGGGACGAATGGGACGAGGTCTACACTTCGCTGGAGACGCTACGCGAGCGCTGTGTCAATGGCACCGCAGCCATCAAGCACATCTACCGACGCTACCTGGACAAATACGAGAAGCTCAACTTCCTCGGCGAAGACCCCGACAAGCTCGAGGCCTTGGAGGCCATCGAAAGCGCCGAGCTGGGCATTGGCGGCAGCCGTTCCCGCGCCCGagccctggccggcggcggcctcggcctgggcagcATGTTCGGCGGCCATCACTCCACCCTCACGGCCGTGCCCATGGCCTacaaccaccgccagcatCAAATACATCCCGAGCGCCGCCGGCAATACAAACTCTCCAGCGATCTGCTCAAGCCCAACAGCTATGAGAAGTTGCTGCTCTCCCTGCTCTCTCCTCTGCCCAATGAGCAGGACTTTGCCATCAACGTGTGCGCCTTGATGACCAACGAGGTGAAGCACACGCTGcgcctggccgactgccccAAGCTGCTGGACGTTTTGCTAGCCCATTTGGGCGTCTATGCCGACTACACCATCCGCCAGGTCTTCCAGCATGGCTACACCAGCGTGCGGCGCCAGTCGCAGCTCAGCTTCTGGCGGGACCTGCTCTACGACAAGCCGCAGATCTTGGAGCTTTTCACCGACGAGCAGACCTGGCTGGACAGCGGCTTGATCCCGAAAACCGAGccggacgaggaggaggccaggGACGAGCTCTTTGCCGACTGCGATGAGCTGGACTTCCTGAATCTGCGCCGCAGCATTGGCACTGGCGACTACATGGGCCAGCGGGTCCTCCAAATCGTCCAGATCGTGCGCAGCCTCAGCTTCCACGAGGAGAACCTGCCCGtcttggccgccagccgcacCCTCTGGCGCTACCTGGTCATGGGCGCCAATGTGCGCTGGAACAACATCCACGTGCAGGCCCTGGAAACCGCGGGCAACCTGGCCAAGGACTTTGATTTGCAGGACCCAGCCACCGACGAGCTTTCCCGCAATCTGTTGGCCACTCTCAGCGAGGGTGTTGAGTCCTCGGACCGCGCCGTCATCATCTGCTGCCTGGAAATCATTTATAAACTCTGCGCCAAGGAAGGCAATGCCGCCCACCTCACCCGCTGCCTGGGCCTCTCCTTCTACCAGCGGGCCGCCCTAATGCTCTCCCTCACCGACGTCATGCTGGTGATCTTCACCCTCGAGGCGCTCTACTCGCTCACCTCGCTGGGCGCCCGGCCCTGCTCGATGCTCATCCAGGTGCGCGGCATCATCGAGCAGCTGGTCAACTTCCTCACCGTCGAGGCCCAAAGCtacggcggcgacggctgcaTACTCATGCGGGTGGTGGAAATTGTGCCAGGCAACATGCTGCCCATGGTGGCCCAAAGTTCCCAGGTCCTGGCCCCAGCCCAGGCCTCCCCAGCCAAGCCGGCCGTGTTGGCTCCACCGCTGCCCAGTcaggcggtggtggtgcccCTGGAGCAGCCCCTGCCGGCCCCGGCCATACCCCTGCCCATGCCCAGCCTGCCGCAGGTGCAACTGCCGCCCGGCGTGGTGTCCACAGTGCCCAGCCTGCCGGTGATCacagcgccgccgcccacagtcccaccagcagcagcggtggtggctgccccgcctccAATAACCACAGCCTCggctgccaccaccaccacaaccaccagcagcttcaccgaggacgacgagcagTACGCCAAGGGCTGGCTGAATGCCTCCTACGAGCGTTCGCCCGGCGGCAACGACTGCCACATCGAGCACCAGGAACTCTACCGCATCTACCTCACCCACTGCCAGAAGGCCGGGCAGCAGTCGGTGGTGAACCGCCTGCAGTTCCCGCACTGCGTGCGCCTGGTCTTCGGCCGGAATGTGGGCCCGACCATTGTGCGCCAGCTGGACGGCATCGAGCTGCCCGGGGCCTACTTCGTGGGCATCCGGGCCCgcgcccagccgctgcccatCCCGCAGAAGGCCAGCCCGGCGGTCTTCTCCACGGTCCTGAAAAAAGAAGCCCCCACCCAAAAGGAAGCAAGCGAGGCGGAACCAGAGACGCCTTCGCCCACTCCCAGCTCCTCGCTAATCAAAagcctgctggccaacaaagTCAACGAGCgccagcagaagcagaaggCTTTGGTgtcccagccgcccagcctggTGCCCACCACAGCggccccgcctgcccagcccatCAAGGTGACCTCGACGGCCATCAGCGCCTTTGTGAACAACCCGCTGATGCAGCACACGCCGGTCAAGGTGGGCCAGACGACCATCAAGCCGCTGCATCCTCAGCTGGCGGTGGAGAAGAAAATCATCACCGACTCGGcgcccccgccgctggccccgctcAGCGGGGCCAATGTGGTCACCAAGGACGGCCGCACCGTGATCATAGCCGCGAATCCAGCCTCTGGAGCGCTCCTCAAGCGCAAGCTCACCATCGACGAGTCCCTGGGCGAGGCCAAGCGTCTGGCCGTGGACTCCACGCCCAGCGGCAAAGAGGAAACCCAGGTGACCCCGTCCAAGAATGCGGCCAACCTCTACGCCGACTTGGCTGCCTCCATCCTAGAAGACGAGGATCTGGACGATGTCCCGCCGCtagccacggccagcagccaggaaGCGCCGGCCCCTCAacccgcccagcagctccagctgaTACCCGCCAAGGTCCACTCCACGGCCCCCCAGAGGCAGCTGGTCTTCCCCGCCTCGAGCGGGCCGCCCCAACTCAAATTGGCCACCACCATGCCGGTGATCCTGCAGCCCAAGCCGCTGGACTcctcggccccgccggcccccaCCCAGTATGTTTTGGCCACCAACCAGCAGGGCCAGACGTAcctggtggcccagcagccgcagccccagccgccgcccacgccgcccaccCAAACCCTGCTGGTCACCCAggcgccccagcagccggccggcggccccaAGACCATCATtatcctgcagcagcagccgtccGCCGGCATTAGCACGGCCAGCGTGCCAGGCACCCAGAAGGTGCTCATGACCACggcccagggccagcaggtgttggtgaccaccaccacccagcagccgcgcccgcccacgccggcccaggcccagcagatTTTCATTAATCCTCAGAGGCCAGCgcctgccgtggccgccgggCAGATGTCGCCCTCGCTGCTCTCGCAGCTCAACCAAATCCCGGCCACCATCAAGCTCCAccagccgcagccccagcccgCGCCAGTGGCccaggcggctgcccagccggccggccagcagcgcctggccaAGGCTGCGGTCACGGCCACGGCCTTGCCGATTCCCCAGCTACAGCAGCACCAGTCGATTATCCAGCAGCACATCATCTCGGGGCCGAGTGAGAAGCGCcaggtgctgctgggcggcggccgcacCATTGAGATCAAGGAGACGCTGATCACCCAGGCGCCGGCCGCGCCGCTCCAGCAGAGCCAACTCAACTCGCAGACCATCATCACCACccagccggcggtgggggtgggcgtggctttgcagcagcagcagcagcacatcCGTTCGGTGCTGGAGCAGCATCATCCGTCGATTATCCAGCAGAAGATCAGcttgccggccacggccacgccgccggccaccgtAGTGTCCAAtgagctggtggtggcggccccGGGCAAGCCGGTGGTTCCGGCTCCCACCAAACCTTTGCCGGCGGCCTCGCCAGGACCTgcagccgggccggcggctgtCAAGCgcccgcggccgctgctgccggccaacaagaccgagccagccaagccggccgaggccaagcCGGTGGAGAGCCCCGCGGCTGCTTCCACACCACCGCCCCAGCctgccaccagcggcagcccagcccccgaggccgctgctgccgccagcggctcCGCTGTGCCCATCGACGTGAACTGGCTGTTCATATGCGACTGGCGGAACTGCCAGCGTAGGAAGTTCAAATCCCTCAACGAGCTGCAGCTTCATGTCTACAACATCCACTGCCCGGACCATTTGGATCCCGGGGCGGAGATCTACTGCCAGTGGGGCAGCGGGCCGGGCCTGTGCGACAATATTCCGCGCAAGCGGTTCTCGCTGATGACCCACCTGATGGACAGGCATCTGTTTATCGACTGTCTAagggccagcgccaggcggcGCATAGCCACTGGGATCCACAATGTggcgcccagccagccgacggtGACGATAGTAAGGAATCCCGAGGCCAGCAGCAATGCCTCGCCGGTGGCTGGGGCGTCGGCTGGCGTTGGGAGCgcgacggcggccggcggtATAGGCCGTTCGGCCATGCAGGCCATCAAGAAGCACACGGAGGACTTTATCAATCCCAAGGAGCTGATGGACGAGAACGAGGGCCCCGTCACGAAGAGTATGCGGCTGACCACGGCTttgattttaaggaatcttgtgTGCTACTCGTCCACGGCCAAGAGGATGCTGAAGGCCCATGAGCCGCACTTGGCCAACGTGGCGCTGAGCAATGTGGAGGCCAGCGGGACTCTTGCCCAGATCCTGTACGAGCTCAGCCAGTAG
- Protein Sequence
- MNTIDNVRVLLQALPPGVGFGQQPPPLPHQPNDLGTPLRARISLQQQPTPASQPLLGTPEKSGGKHMTTLKAPEEFWRDLHQFHERRGTPLTQAAKISGQRVDLYKLYNEVTDRGGFNKVNMRDEWDEVYTSLETLRERCVNGTAAIKHIYRRYLDKYEKLNFLGEDPDKLEALEAIESAELGIGGSRSRARALAGGGLGLGSMFGGHHSTLTAVPMAYNHRQHQIHPERRRQYKLSSDLLKPNSYEKLLLSLLSPLPNEQDFAINVCALMTNEVKHTLRLADCPKLLDVLLAHLGVYADYTIRQVFQHGYTSVRRQSQLSFWRDLLYDKPQILELFTDEQTWLDSGLIPKTEPDEEEARDELFADCDELDFLNLRRSIGTGDYMGQRVLQIVQIVRSLSFHEENLPVLAASRTLWRYLVMGANVRWNNIHVQALETAGNLAKDFDLQDPATDELSRNLLATLSEGVESSDRAVIICCLEIIYKLCAKEGNAAHLTRCLGLSFYQRAALMLSLTDVMLVIFTLEALYSLTSLGARPCSMLIQVRGIIEQLVNFLTVEAQSYGGDGCILMRVVEIVPGNMLPMVAQSSQVLAPAQASPAKPAVLAPPLPSQAVVVPLEQPLPAPAIPLPMPSLPQVQLPPGVVSTVPSLPVITAPPPTVPPAAAVVAAPPPITTASAATTTTTTSSFTEDDEQYAKGWLNASYERSPGGNDCHIEHQELYRIYLTHCQKAGQQSVVNRLQFPHCVRLVFGRNVGPTIVRQLDGIELPGAYFVGIRARAQPLPIPQKASPAVFSTVLKKEAPTQKEASEAEPETPSPTPSSSLIKSLLANKVNERQQKQKALVSQPPSLVPTTAAPPAQPIKVTSTAISAFVNNPLMQHTPVKVGQTTIKPLHPQLAVEKKIITDSAPPPLAPLSGANVVTKDGRTVIIAANPASGALLKRKLTIDESLGEAKRLAVDSTPSGKEETQVTPSKNAANLYADLAASILEDEDLDDVPPLATASSQEAPAPQPAQQLQLIPAKVHSTAPQRQLVFPASSGPPQLKLATTMPVILQPKPLDSSAPPAPTQYVLATNQQGQTYLVAQQPQPQPPPTPPTQTLLVTQAPQQPAGGPKTIIILQQQPSAGISTASVPGTQKVLMTTAQGQQVLVTTTTQQPRPPTPAQAQQIFINPQRPAPAVAAGQMSPSLLSQLNQIPATIKLHQPQPQPAPVAQAAAQPAGQQRLAKAAVTATALPIPQLQQHQSIIQQHIISGPSEKRQVLLGGGRTIEIKETLITQAPAAPLQQSQLNSQTIITTQPAVGVGVALQQQQQHIRSVLEQHHPSIIQQKISLPATATPPATVVSNELVVAAPGKPVVPAPTKPLPAASPGPAAGPAAVKRPRPLLPANKTEPAKPAEAKPVESPAAASTPPPQPATSGSPAPEAAAAASGSAVPIDVNWLFICDWRNCQRRKFKSLNELQLHVYNIHCPDHLDPGAEIYCQWGSGPGLCDNIPRKRFSLMTHLMDRHLFIDCLRASARRRIATGIHNVAPSQPTVTIVRNPEASSNASPVAGASAGVGSATAAGGIGRSAMQAIKKHTEDFINPKELMDENEGPVTKSMRLTTALILRNLVCYSSTAKRMLKAHEPHLANVALSNVEASGTLAQILYELSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -