Lsab008305.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lissocephala sabroskyi
Gene Symbol
osa
Assembly
GCA_037075105.1
Location
JBAMCP010001593.1:4801-16089[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.3e-24 1.3e-20 74.1 0.0 3 89 504 590 502 590 0.91

Sequence Information

Coding Sequence
ATGGGCTCTGGTCCGCCGGGCACACCGAATCCCCAGCAGGTGATGCGACCCACGCCATCGCCCACATGCTCGTCCGGTTCACGTTCCATGTCGCCAGCAGTTGcACAAAACCATCCGATCTCGCGGCCGGCTAGCAATCAGTCAAGCGGCGGTGGTCCCATGCAGCAACCGCCGGTTGGCTCCGGGCCGCCACCAATGCCACCGCATGGCCTGCCCggcggccccccgcccccgcagcagcagcaatctcagcagcagcagcaacaacagcagcagccctcAAAttcggcctcctcggccagcaattCACCTcagcagacgccgccgccggcgccgccgcccaaccagAGCATCAACAACATGGTcaccccgccgccgccccaaggAGCGGCCGGTGGTTATCCTATGCCGCCGCACATGCACGGCTGCTACAAGATGGGCGGTCCTGGACAAAGTCCCGGCGCCCAGGGCTAtcccccccagcagccgcagcagtaCCCGCAGGGTAACTACCCGCCACGCCCTCAGTATCCGCCTAGCGCCTACGCCactgggccgccgccaccgcccacaagtcaggccggcggcgtggccaaCAGCATGCCGCCCGGCGCCCAGGTCGGCTACCCAGGCCGCGGCATGCCCAACCACAGCGGCGGCAGTCCCCACGGCCAGTACCCGCCGTACCAATGggtgccgccgtcgccccagcagcaggcgccggCCCCAGGCAGCGCCATGGGCAACCATGTCCAGGGCAAGGGCACCCCGCCGCCGGTGGgaggcccgccgccgccccagggCAGCGGTTCCCCGCGGCCCCTCAATTATCTGAAGCAGCATTTACAACACAAGGGCGGCTATGGCGGCAGCCCGACGCCGCCGCAAGGCTATGGCAATGGACCGGCGGCCATGCATCCGGGCATGCCGATGGGTCCGCCGCATCACATGGGACCGCCCCAGCCGCATGGGCCCACGAGCAtggggccgccggccagcacgccgccccagcagtcgatgctgggcgggcaggcctCGGCGGAGGGGGGCCCGCCGGAGCACTCGGCCCAGGACAATGGGATTGCGGGTATTCCCGGTGGCGCGGCCGGCATGCATGCGGTGACTGCTGTGGTCACCACCGGGCCCGACGGCACTCCCATGGACGAGGTCAGCCAGCAGAGCACGCTCTCCAATGCATCGGCAGCATCTGGCGAGGATCCGCAATGCACCACACCAAAGTCAAGGAAAAACGATCCGTATGGCCAGGGGCATTTGGCGCCGCCGAGTACATCGCCGCATCCCATTGCCATGTACCCGGGCAGCGGTGGGCCGCCCGGCGAGGAATGCGACATGAACtccccgcccagctggcccagaCCCGGTGCTAGTCCGCAGGTTTTCAACAGCCATGTGCCCGTGCAGCAGGAGCCGTTCAGGAGTTCGGTGACCACCACCAAGAAATCGGATTCGTTGTGCAAATTATACGAAATGGACGATAATCCCGATCGCAGGGGTTGGCTGGACAAGCTGCGCGGCTTCATGGAGGAGCGCCGATCGCCCATCACCGCCTGTCCCACCATCTCAAAACAGCCACTCGATTTATATAggttatatatttatgtaaaagAGCGTGGCGGATTCGTCGAGGTATGCAAGGTGACCAAGAGCAAAACCTGGAAGGACAtcgccggcctgctgggcatcggcgccagcagcagcgccgcctaCACGCTGAGGAAACATTACACCAAAAATCTGCTGGCATTCGAATGCCACTTCGATCGTGGGGACATCGACCCGCAGCCGATCATCCAGCAGGTGGAGGCGggcagcaagaagaagacaacgAAGGCGGCCTCGGTGCCATCGCCAGGCTCCTCCAACTCCCAGGACTCATTCCCCGCACCCCCCGGTGCCGCCCCCAATCCGCCCACCATCGACGGCTATCCTGGCTACCCCGGGGCCACGGCCGCCTACCAGGGACCAGCAGGATCCGGGCCGCCGCAGCCGGATTACGGCAACGCTGGACAAATGCAAAGGCCGCCGTCGCAGTCGAATGCCCAGACCCCGCATCCTGGCAACCAAAACCCGAGCtccgtcgttgttgccggtGATAATATCAATGTGAGCAATCCTTTCGAGGATCCCATTGCCGGTGGCTCGATGGCCGCTGccaatgctgctgctgccgctgcggccgcggcggctgctgctgctgccggcggtcACCCGCAtcccgcccacccaccgccgcccccgcatTCGCCCCACGGAGGAGCTGCCGGGCCGTCGACCCtccaaccgccgcccaccccccagcagcagcagcagcaacaacagcagcagcagcaggccactGGGCAGccgcatcagcagcaacaacaacagccaccaccccaacaacaacaatcacaacaaccaccaccacccaatCAGTCACATGGTCCCGTCGTGCCATCGTCACCGTCACAACATTCTCGCCCCGGCCCTGGAGCATCCTATCCTCCGCCGCCGGGCGCCACCTCCGGTTACCCACCATCGGTGTCTAGAACGCCAGGCTCCCCATATCCGAGCCAGCCGGGCGCTTATGGTCAGTACGGATCGAGTGATCAGTATGGCGCCACCGGGCCACCTGGCCAGCCGTTCGGACAGAATCAAGGACAATATCCGCCGCAGAACCGCAATATGTACCCTCCCTATGGGCCCGAGGGAGAAGCTCCTCCCGCCGGTGCTAATCAGTATGGACCGTATGGCAATCGTCCTTACAGCCAGGCCCCGCCTGGCGGGccacagccacccagccagccggtggcAGGCGGACCGCCGACCAGCGGAGCCCCAGGGGTGCCACCAAGCGGTGCTTACGCGCCGGGAGCCACCGCCCAGCAGGATTACTACAGGCCTCCCGACCAGAGTCCCCAGCCACGACGCCATCCCGACTTTGTCAAAGACTCTCAGCCATATCCAGGCTACAATGCAAGGCCACAAATTTACGgTGGCTGGCAAGGCGGCAGTCAGCAGTACCGCCCGCAATACCCCACATCGCCCGCACCACCACAGACCTGGGGCAGTGCACCACCGCGTGGTGCCGCGCCGCCCAGTGGCCCCCACGGCCCGCCGCCCAACCAGCAATCAGCCGCCGTGGCCCAGTGGGAGCAGCATCGCTACCAGCAGGCCCAACAGGCCCCGCCAccaccccagcagcagcagccccagccgccctaCCAGCAAGGCGCCCctcccggccagcagcagccgcaggccccGCCCCAATGGGGCCCCATGAATGCAGTGCAGGGCGCCCAAGCCGGCATAGCCCCGCCCAGCTCGCTGCTGCGTCCCCCAGCCGGCAGTGGCccgcagcagcgcctgccTGGCAGCGGAGTGCCCGGCCTGAcgccgcagcaacagcagcagggccagccgGGTGTCCCAGGGACCCCAGGCATGCCCTCAGTGCCAGGCAGCATGGGCAAACCAGCCTACGCCATGCCGCCGCCCGTGCAGGCCGCCAACCAGCCGGGCGGAGTGCCCATGGTGGTGGGCCCACCGCCAGGCAGCATGATGCCGctgaagcagcagccgcccggccagcccatggtgccacagcagcagcagccgccgccgcatcaaatgcccggccagccacagccaggAGTCtacccgcagcagcagccagtggctgtgggcgggccggcggcaggaggcccgctgggcggcggctcaggcgggcagctggccaagaaggagCTGATCTTCCCGCACGACAGCGTAGAGGCTACGACGCCGATTCTGTACAGGCGCAAGCGGCTGACCAAGGCGGATGTGTGCCCGGTGGATCCTTGGCGGATCTTCATGGCCATGCGCTCGGGGCTGTTGACCGAGTGCACTTGGGCCTTGGATGTGCTGAATGTGCTGCTGTTTGACGACTCCACAGTGCAGTTCTTTGGGATCTCTCACCTGCCCGGCCTGCTGaccctgctgctggagcattTCCAGAAGAATCTCGCCGAGATGTTCGAGGAACGCTGCGAAGAGGCCCGCGAGTCGCCGGCGGCcctggacgaggccgacgACGATGCCGACAGCGGGACAGTCGTGGTGCTGTCCACTCAAAAGCGTCGCCGCCAGCCGCACGGGCCGCGCAGCAAACAGGAACGCAGGCATTTGCCGGCCGCGGCCCCCGAGGACTCGGACGAGGCTGACGAGGGCATTGACCTGGGCCAGGTGCGCCTGCAGCCAAACCCCGAGGAACGCACTGTGCTGCTGTCCTACACCCCCAACTATACGATGACCTCACGCAAGGGAGTCCCCGTGCGCATCCAGCCCGCCGAGCAAGACATTTTCGTGGACGAGCGCCAGAAGTCCTGGGACATAGACACGAACAAGCTGtacgagcagctggaggcggTGGGCAGCAATGCGTGGACCTATGGATTCTCGGATCCTGATCCTTTGGACGGCATCATTGATGTCTTTAAATCGGAGATTGTAGACATTCCATTCGCCCGCTACTTGCGCAGCAAGAAGCccccaagccagccagcggccaaggCTGACGAGGCAGCGCTCCCGCCCATCAAGCAGGaggacaccagcagcagccatgCCGAGGACAGCCAGCAGTACAACAAGAAGCGGAGACTGGTGGCGCCTGCCGAGGACACTAAAAAGGCCAAATTGTCGGAGGACGAATTCGCCCAGCCCCTGGCGGAGGTGAAAAAGGAAACCACCAGCGCCTCGGCAGCCGGCGACAGCGATTGCCGGGCCGTGGACATGGAAATCGAATCCCCCCATCAACAAAAGCTCACCAATGGAGTGGCAGCCGCTCCCCCGGGCAGCTTCGATCCCAAGACAACGGTGAGAGATGCGGCCCAAGTGCTCCAGCGGCGCCGGGACTCCAGCTTCGAGGACGAATGCTACACCCGCGACGAGGCCTCCCTGTATCTGGTGAACGAGAGCCAGGACTCCCTGGCCCGCCGCTGCATCGCCCTGTCCAACATTTTCCGCAACCTGACCTTCGTGCCCGGCAACGAGACAGTGCTGGCCAAATCCTCCCGATTCCTGGCCGTCCTGGGgcatctgctgctgctcaaccACGAGCATTTAAGGCGCACGCCCAAGACCCGCAACTACGACCGCGAGGAGGACACCGACTTCAGCGAGTCCTGCAGCTCGCTGCAGGGCGAGCGCGAGTGGTGGTGGGACTACCTGATCGCCATCCGGGAGAACATGctggtggccatggccaacatAGCCGGCCATTTAGAGCTTTCCCGCTACGACGAACTCATAGCCCGTCCCTTGATCGATGGACTGCTGCACTGGGCCGTCTGCCCCAGTGCCCATGGCCAGGACCCCTTCCCCTCCTGCGGCCCCAACACGGCCCTCTCGCCCCAGCGCCTGGCCCTGGAAGCCCTCTGCAAGCTGTGCGTGACCGATGCCAATGTGGACCTGGTGATAGCCACGCCGCCCTTCTCGCGGCTGGAGAAGCTCTGCGCTGTTCTCACCCGCCATCTCTGCCGCAACGAGGACCAAGTCTTGCGCGAGTTCTCAGTGAACCTGCTGCACTACCTGGCGGCGGCCGACAGCGCCATGGCCCGCACGGTGGCTCTCCAGTCGCCCTGCATCTCCTACCTGGTGGCCTTCatcgagcaggccgagcagacgGCCTTGGGCGTGGCCAACCAGCATGGCATCAACTACCTGCGCGAGAACCCGGACTCCATGGGCACCAGCCTGGACATGCtgaggcgggcggccggcacGCTGCTGCATCTGGCCAAGCATCCGGACAATCGGTCGCTGTTCatgcagcaggagcagcggctgctgggcctggtcaTGTCGCATATTCTGGACCAGCAGGTGGCCTTGATTATATCCCGTGTGCTGTACCAAGTGTCCCGCGGCGTGGGCCCCATGCACTCGGTGGAGTACCGATTGttgcagctgcgccagcaacaacaacagcaacagaaagcAGCCGCGACACCGGCAGCCCCAGCGGCCGACAAGCCAGCGGATCCTCTGCCCTCCGTCAAGCAGGAGTCGCTGGAGGCAAAGCCCGCGGCAGTGGCtgccccagcaacaacggcgccAGCAACCTCCTCGGCCGTGGTCAACGACgagaacagcaacagcagcagccagcaactaCCTCCGGCGGCCACCTTCAATGAcgtcagcaacagcagcaccaacagcaacagctgcggcacggccagcagcaatctgagcaacagcagcagtctGGGCAGCAACAGTCagtcggcctcggcctcgacctcggccacggccccgcccacgctcAACAATGTGGAGGCGACCAACAGCGAGCAGGCGCCGGCCacgccacccgccgccgcggcagcagcaacaacggcgccgccagcaacaacaacagtgacCACAGTGACGGCtgcctcgccgccgctgcagctgggGAAAGCGGCCGCCTcgttggcggcagcggccagcagccagcagctgagCAATTCAACGGGCGTGAGTGCTGCGCCGACggcgccgcctccaccgccgccggccacggccgggACGACGGCTGCCGTTGCGTAG
Protein Sequence
MGSGPPGTPNPQQVMRPTPSPTCSSGSRSMSPAVAQNHPISRPASNQSSGGGPMQQPPVGSGPPPMPPHGLPGGPPPPQQQQSQQQQQQQQQPSNSASSASNSPQQTPPPAPPPNQSINNMVTPPPPQGAAGGYPMPPHMHGCYKMGGPGQSPGAQGYPPQQPQQYPQGNYPPRPQYPPSAYATGPPPPPTSQAGGVANSMPPGAQVGYPGRGMPNHSGGSPHGQYPPYQWVPPSPQQQAPAPGSAMGNHVQGKGTPPPVGGPPPPQGSGSPRPLNYLKQHLQHKGGYGGSPTPPQGYGNGPAAMHPGMPMGPPHHMGPPQPHGPTSMGPPASTPPQQSMLGGQASAEGGPPEHSAQDNGIAGIPGGAAGMHAVTAVVTTGPDGTPMDEVSQQSTLSNASAASGEDPQCTTPKSRKNDPYGQGHLAPPSTSPHPIAMYPGSGGPPGEECDMNSPPSWPRPGASPQVFNSHVPVQQEPFRSSVTTTKKSDSLCKLYEMDDNPDRRGWLDKLRGFMEERRSPITACPTISKQPLDLYRLYIYVKERGGFVEVCKVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAFECHFDRGDIDPQPIIQQVEAGSKKKTTKAASVPSPGSSNSQDSFPAPPGAAPNPPTIDGYPGYPGATAAYQGPAGSGPPQPDYGNAGQMQRPPSQSNAQTPHPGNQNPSSVVVAGDNINVSNPFEDPIAGGSMAAANAAAAAAAAAAAAAAGGHPHPAHPPPPPHSPHGGAAGPSTLQPPPTPQQQQQQQQQQQQATGQPHQQQQQQPPPQQQQSQQPPPPNQSHGPVVPSSPSQHSRPGPGASYPPPPGATSGYPPSVSRTPGSPYPSQPGAYGQYGSSDQYGATGPPGQPFGQNQGQYPPQNRNMYPPYGPEGEAPPAGANQYGPYGNRPYSQAPPGGPQPPSQPVAGGPPTSGAPGVPPSGAYAPGATAQQDYYRPPDQSPQPRRHPDFVKDSQPYPGYNARPQIYGGWQGGSQQYRPQYPTSPAPPQTWGSAPPRGAAPPSGPHGPPPNQQSAAVAQWEQHRYQQAQQAPPPPQQQQPQPPYQQGAPPGQQQPQAPPQWGPMNAVQGAQAGIAPPSSLLRPPAGSGPQQRLPGSGVPGLTPQQQQQGQPGVPGTPGMPSVPGSMGKPAYAMPPPVQAANQPGGVPMVVGPPPGSMMPLKQQPPGQPMVPQQQQPPPHQMPGQPQPGVYPQQQPVAVGGPAAGGPLGGGSGGQLAKKELIFPHDSVEATTPILYRRKRLTKADVCPVDPWRIFMAMRSGLLTECTWALDVLNVLLFDDSTVQFFGISHLPGLLTLLLEHFQKNLAEMFEERCEEARESPAALDEADDDADSGTVVVLSTQKRRRQPHGPRSKQERRHLPAAAPEDSDEADEGIDLGQVRLQPNPEERTVLLSYTPNYTMTSRKGVPVRIQPAEQDIFVDERQKSWDIDTNKLYEQLEAVGSNAWTYGFSDPDPLDGIIDVFKSEIVDIPFARYLRSKKPPSQPAAKADEAALPPIKQEDTSSSHAEDSQQYNKKRRLVAPAEDTKKAKLSEDEFAQPLAEVKKETTSASAAGDSDCRAVDMEIESPHQQKLTNGVAAAPPGSFDPKTTVRDAAQVLQRRRDSSFEDECYTRDEASLYLVNESQDSLARRCIALSNIFRNLTFVPGNETVLAKSSRFLAVLGHLLLLNHEHLRRTPKTRNYDREEDTDFSESCSSLQGEREWWWDYLIAIRENMLVAMANIAGHLELSRYDELIARPLIDGLLHWAVCPSAHGQDPFPSCGPNTALSPQRLALEALCKLCVTDANVDLVIATPPFSRLEKLCAVLTRHLCRNEDQVLREFSVNLLHYLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQVALIISRVLYQVSRGVGPMHSVEYRLLQLRQQQQQQQKAAATPAAPAADKPADPLPSVKQESLEAKPAAVAAPATTAPATSSAVVNDENSNSSSQQLPPAATFNDVSNSSTNSNSCGTASSNLSNSSSLGSNSQSASASTSATAPPTLNNVEATNSEQAPATPPAAAAAATTAPPATTTVTTVTAASPPLQLGKAAASLAAAASSQQLSNSTGVSAAPTAPPPPPPATAGTTAAVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-