Lsab000102.1
Basic Information
- Insect
- Lissocephala sabroskyi
- Gene Symbol
- slbo
- Assembly
- GCA_037075105.1
- Location
- JBAMCP010000003.1:313879-315306[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2 2.3e+03 -0.7 0.8 34 55 126 149 117 154 0.61 2 3 5.8 1.1e+04 -2.9 1.1 37 52 363 378 361 382 0.58 3 3 4.9e-13 9.1e-10 39.0 11.7 3 65 390 452 388 452 0.96
Sequence Information
- Coding Sequence
- ATGCTCAACATGGAATCGCCACAGATGTACGATGCCGTGCAGACGCTGGCCCAGCTCGACctgaagaagcagcagcagcaacaacagcagcagcagcagcaacaacagcaacagcagcagcaacagtcgccGGTCCAGCAGGCGACCATAGGCCAGATCACCCTGACGGCGATGTCCagtgcgcagcagcagcagcagcagcaacagcagcaacagcagcagcagcaacaacagcagcagcaacaaaacggcggcggcctgaccgacgccaacaacaatgcccaGGATGCCACCGCCCTGCTGGTCAAGCAGCACGCGGCCATGCACCAAATGCAGCActcggcggccgctgctgtcctcaacaacaacaacaacgtggcCGCCCTCAACGCCAACAACGTCAACAACCTGCtccagaagcagcagcaaatgctgcAGCAATACACCACCCAAACCGACCTCGACGAGCTGACCACCCAGGAGATCACCCTGGACCTGCAGCACCTCATCGACGACCAGTTCCGCGACCCGGAGACGCTTGGCATCTTCAGCGACATGGTCACGAGTCCGGGCGGCCTATCGGCCACCCTGCCGCCCAGCGGCATGGTCAGCGCCGCGGCCAaggtcctgcagcagcagcagacccTGGCCAGGACCCAGCAGCATGGCTATGGCCGGGCCACGCTGCCCTACATGCCGCAGGCCGTCCACTCCAGCGCGGCCTACAACAATTCCAGCGACGAGAACAGCTCCGTGGGCTCGGACTCCAGCACGATCAAGGAGGAGCCCATTGACCCGGACTATCGGCGGCACTTGCAggaggccagccaggccagcaatgcggcggcagctgcggccttTATGACCAACGGCAATGGCCTGTACAATGCCTACCAGACGAacgggctgggcggcagcaacagcaacggcaacaatgccaacggcaacaacggcgcTGGCGGGCTCAACGGCAATCCGGCCAACGGCAATGTCAATGTGAATGGCGGAGGCGGCAATCAGTTCACCAATCTGACCACCGCCAATGTCCTGGCCCACCACAACCTGCCCCACCTGGCGGGGGCCCAGCTGCTCAAGCATCACAacaagctgcagcagcagcagcagcagcagcggaagcACAGCGTCAAGCATGTGGACAAGGGCACGGAGGAGTACCGAAGGCGCCGGGAAAGGAACAACATTGCCGTAAGGAAGAGCCGCGAGAAGGCCAAGGTGCGCTCGCGGGAGGTGGAGGAGCGCGTTAAGTCGCTGTTGAAGGAGAAGGATGCGCTCATGCGCCAGCTCCAGGACATGACCAACGAGCTGCAGTTGCACAAGCAAATCTACATGCAGCTCATGAACCACACGAATCCGGAAGTGAGTCGGGTGTGTCGCAGTTTCCTCAACACCAACGAGCATGCGCTGtag
- Protein Sequence
- MLNMESPQMYDAVQTLAQLDLKKQQQQQQQQQQQQQQQQQQQSPVQQATIGQITLTAMSSAQQQQQQQQQQQQQQQQQQQQQNGGGLTDANNNAQDATALLVKQHAAMHQMQHSAAAAVLNNNNNVAALNANNVNNLLQKQQQMLQQYTTQTDLDELTTQEITLDLQHLIDDQFRDPETLGIFSDMVTSPGGLSATLPPSGMVSAAAKVLQQQQTLARTQQHGYGRATLPYMPQAVHSSAAYNNSSDENSSVGSDSSTIKEEPIDPDYRRHLQEASQASNAAAAAAFMTNGNGLYNAYQTNGLGGSNSNGNNANGNNGAGGLNGNPANGNVNVNGGGGNQFTNLTTANVLAHHNLPHLAGAQLLKHHNKLQQQQQQQRKHSVKHVDKGTEEYRRRRERNNIAVRKSREKAKVRSREVEERVKSLLKEKDALMRQLQDMTNELQLHKQIYMQLMNHTNPEVSRVCRSFLNTNEHAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01318781;
- 90% Identity
- -
- 80% Identity
- -