Lsab008279.1
Basic Information
- Insect
- Lissocephala sabroskyi
- Gene Symbol
- Atf3
- Assembly
- GCA_037075105.1
- Location
- JBAMCP010001579.1:3605-12056[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-16 3.9e-13 49.8 14.0 2 65 161 224 160 224 0.97 2 2 1.8 3.4e+03 -1.3 0.3 36 49 287 300 281 301 0.80
Sequence Information
- Coding Sequence
- ATGTTCAATTCAAATATCTCCGCCACGGCCCTGCTGACcatcgacggcggcagccacacGCCGAAGACGCCCGAAATTCTCAACTCGCTGATCGCCATGACGCATCCTTTGGATAACTTCAACTTTAGCGCCACATCGAGTGCGGCCTCCACGCCCATCGCCCCCATGCGCACCCtcaatggcaatgccaatgcACAGTCGCACTCGCAGGACAGCAGTCATTCCAGTTGCTCGGCATCGCCGCTGGACTCGCCGGCAGGCACGGCAACCATGCCCAGTGTTCAGCAGACCTGCTCCCAACTGATCAAGGCCGGCCTGAAGTTGTCGATCCAAAGCAAACGCAAACTCTCCACCTGTGACTCGAGCAGCGGCTCCGAGCAGCCGAACTCGAAGTGCTCGCGCCGCGACGACGACTGCGAGGAGtccagcgacgacgacagcgaaaCCAAGTCCATGCCCAAGGGCCTCAccgccgaggacgaggaccgccgccgccgacgccgcgaGCGCAACAAAATCGCCGCCACCAAGTGCCGCATGAAGAAGCGCGAGCGCACCCAGAACCTCATCAAGGAGTCCGAGGTCCTCGATGCCCAGAACATCGAACTAAAGAACCAAGTGCGCTCTCTAGAAACCGAGCGCCGCAATCTGCTCGGCATGCTCCAGTCCCACGAGCCCAGCTGCATGCGCCGCGGTGGCTGCAATTTGCCCTCCAAGCTGCTCGTCTCGCCGGCCCACAAGTACCTGGCCGACCTGGAGCTGGAGGGCGGCCACGGGGAGGCGGTCACGGCCAACCAGCAGCGCATGGGCATACCCTCGATGTCGACCTTCAAGGCCACCattgctgcggccgccgcggtggtccagcatcagcagcagcaattgctgcAGGAGGCCCAGCTGCCGAATGGCTACTGCAAGCCGTCGCCTAGTTCCCAGGAGTTCGAGCATCCTGGGTACTTGAATTCGCCGAATCAGGAGGCCTTGTGCCTGCCAAGTGGCTTGCAGCAGCAATTGacacccaccagcaacaatgccagcaacaacaacagcaacaacctgACCAACGGCTCGGCCGGCGTGTCCGACTACTTGCCCAACTGCGAGGGCATCTCCCTGGGCCTGAGCCTGCCCAACACGACCACCGTTATAGCCTCACCCACCTCGAATGACCCGGCGGCTGCCGTTAATGAtcccgtggccgtggccctgCGCCGCAGCCACAACGACCTGCCCAGCCCCCTGGGCGGCCTGCACCACCCCAGCCTGGGGGTCAACGGCGGCGTCAGCGTCTCTGTCAATGCTGCCGCGCCCACCACGGCCCTGGAGTTCGTGAAGAACGAGCTGGTCGACTCCCACAGCCCCTACACCAGCGAGCTCTCCGCCGAGCGCTTCCTGTTCGAGTCCAGCGACGGCTTCCCCGACATCAAGCATGCGGTGAGTGTCCACAACGTCAacctgaacaacaacaaccacctgCTGGACTTCCACACCCCgatgctgggcggcggtggcgtgggcgtggcgaaTGGCGTGGGTCCTGGCCTGCCCGTGGGCGTCGGCGTGGGCGTTGGCGGCAATGTGATGGCCTCGTGCTATGACGAGGAgcagttgctgctgatgaAGAACAGCTACTTGCAGACGGACCTGCTGTGCCTGGCGGAGGATGCCAGCGAGCTGGTGGACTTGGACACGGGGGCCGCGGCCTTCATAACcaacggcagctgcctggcgTGA
- Protein Sequence
- MFNSNISATALLTIDGGSHTPKTPEILNSLIAMTHPLDNFNFSATSSAASTPIAPMRTLNGNANAQSHSQDSSHSSCSASPLDSPAGTATMPSVQQTCSQLIKAGLKLSIQSKRKLSTCDSSSGSEQPNSKCSRRDDDCEESSDDDSETKSMPKGLTAEDEDRRRRRRERNKIAATKCRMKKRERTQNLIKESEVLDAQNIELKNQVRSLETERRNLLGMLQSHEPSCMRRGGCNLPSKLLVSPAHKYLADLELEGGHGEAVTANQQRMGIPSMSTFKATIAAAAAVVQHQQQQLLQEAQLPNGYCKPSPSSQEFEHPGYLNSPNQEALCLPSGLQQQLTPTSNNASNNNSNNLTNGSAGVSDYLPNCEGISLGLSLPNTTTVIASPTSNDPAAAVNDPVAVALRRSHNDLPSPLGGLHHPSLGVNGGVSVSVNAAAPTTALEFVKNELVDSHSPYTSELSAERFLFESSDGFPDIKHAVSVHNVNLNNNNHLLDFHTPMLGGGGVGVANGVGPGLPVGVGVGVGGNVMASCYDEEQLLLMKNSYLQTDLLCLAEDASELVDLDTGAAAFITNGSCLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -