Lsab005750.1
Basic Information
- Insect
- Lissocephala sabroskyi
- Gene Symbol
- cnc
- Assembly
- GCA_037075105.1
- Location
- JBAMCP010000865.1:20723-30525[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-17 2e-14 53.9 8.0 3 62 709 768 707 771 0.94
Sequence Information
- Coding Sequence
- ATGGCCACTCATGGTGAATACATTCGCTTGCCTTTGGATGAGCTGCTCAACGACGTCTTGCAACTCTCATCGGGATTCCCATTGGACGACGAGCTTCAGGACGATTCGGTAGCCTCGACTTcccaggcagctgccgccttgcagagcaacaacaagaacaagaagcaGTTTGTGTCTGAAACCGGCGAGGATCTTTTGGTATTGCCAAcggccaacgacgacgaaaaCGCCACCTTAACCGCCAAAACCGAAAAGGACTCGGACGGCAATCGCAGCGGCAACGAGGACAGCTTCTCTGTCAGCGACTTTGACGAGTTGCAAAACTCGGTCGGCTCGCCCCTCTTCGACTTAGATGAGGACGCCAAAAAGGAACTAGACGAGATGCTGCAATCAACTGCCCCACCCTACCACCATCCCCACCACccccatcaccaccaccacgcccaccatgcggccgccgcggctgcggcccatcaccaccaccagaggGCCgtccaggcggccgccgcccccaactACGCAAGCGTGGGCAGCGGCCCGAACAGCGCCTTTCACCGGCAGGCAGCCACGGCCGGCGGCTTCCATCATGGACACCATCAGAGCCGCATGCCGCCGCTGAATCGCAGCGTTTCGATggagcagcgcctgcaggacATTGCCACTTTCTTCAGCCCGATTCCGGAGATGCCGCCCTATCCGCATTATCCCAGCTACTCCTACCAGGGACCGGGGGCCGGCATGCCGCCTTCCCAGCAATACGGCCATGCGGctgggccaccaccgccgccgccaccccatCATGGACATCCGGCGGCCGCCATGCTGCATCCGAACGCGGCTCTGGGCGACATCTGTTCGGGTCCCGGCGGCCAGCCGCATTATGGCCACAATCTTGGCTCGGCTGTGACCTCTAGCATGCATCTGACCAACTCCAGTCACGACTCGGATGGGGCTGCCTCGGGGGCTGCCGGCAATCCCTACAAAATGGAACACGACATGATGTACTACACGAACGCCTCGTCGGATATGAATCACAACACCGATGGCTTCatcaattcgattttgaatGACGAGGACTTGCAATTGATGGAAATGAATGAGAGCTTCTGTCGCATGGTGGACAACAGCACGAGCAACAACTCCTCATTGCTGGGCCTGCCGAGCAGCGGTCATGGTAGCAACTCGGGCAGCACCATCGGAGCACTTCTACCAGGCGGCGGAATCGGACACCCGGCAGTCGGCTCCTCAGGCGTAGGACTGTCGAtgagcggcggtggcgcccCCGCCGGAGGATCTGCGGCGGGCATGACAGCTGATctcctggccagcggcggcggacCACAGACCGGCACCGATCGTTTGGACGCTTCCAGTGACAGCGCCGTCAGTTCCATGGGCTCCGAGCGAGTCCCCTCGCTCTCCGACGGCGAGTGGGGCGAGGGCAGCGACTCCGCCCAGGAGTACCACCGCAGCAAATACGGAGGTCCCTACGACTTCAGCTACAACAACACAACTCGCATTTCAGCGGCCACGCGCCAGCCCCCAGTGGCCCAAAAGAAGCATCAACTGTACGGCAAACGGGATCCCCACAAGCACACGCCCAGCGCCTTGCCACCATctgggccaccagcagccacctCGGCCCAGGTCCCTCCCAGTGCTGTGCAATGCCAGGCCATCAAATACGAGTACGACGCCGGCTATGTGGACATGAGCGGCTCCTCGGGGCTCCAgcacagcggcagcgaggcTGGGGCCATGGGCCCGGCCCTGTCCAAGGACTACCAGCACCAGCAGTCCTACGGCATgggagccgccggcagcgagtACTCCGTGCGTCCCCCGCGTCCGCCACGCAACAGCCAGGAGGTCGTCCAGCATAACCACACCTACACGCTGCCCCAGGGAACTGGGTCGCTGCCGAGACCGCAGGCGCGCGACAAGAAgctgagcagcagcagtggaTCCGCCAGCTTGTCCGAGGAGGAGCACTTGACGCGGGACGAGAAGCGCGCGAGGGCCCTGAACATACCGATACCAGTGAGCGACATCATCAACTTGCCGATGGACGAGTTCAACGAGCGGCTGTCGAAATACGATCTGAGCGAGAATCAGTTGTCCTTGATCCGCGACATACGCCGGCGGGGCAAGAACAAGGTGGCTGCCCAGAACTGCCGCAAGCGCAAACTCGATCAGATCCTGACCCTCGAGGATGAGGTGAATGCTGTGGTGAAGCGCAAGAATCAGCTGACCCAGGAGCGCGACAGTCTGGAGGCCGAGCGCAAGCGCATCTCCAATAAGTTTGCCCTGCTCCATCGCCATGTGTTCCAGTATCTACGCGATCCGGAGGGCAACCCGTGCTCGCCCAGCGACTACAgcctgcagcaggcggcggacGGCTCCGTCTACCTTCTGCCGCGCGACAAGTCGGACAGCAACAGCACTGCCACCTCGACTTCGAGTTCTGTGTCCTCGGGAGCCGGCCtcaatggccatggccacaaTGGGGCCGTCCACAGGCTCTCGCACAGCCAGAACTCGCAccaccaggccgcccagcacgTGGCCATGTCCCAGCAGCAGTCGCGCCTGCCGCCGCATCATccgcagctccagcagccgctccatCATCACTCACAGcatccccagcagcagcagcagcccccctcccagcagccgcaccacaACGCGCAGCACAAGGAATGA
- Protein Sequence
- MATHGEYIRLPLDELLNDVLQLSSGFPLDDELQDDSVASTSQAAAALQSNNKNKKQFVSETGEDLLVLPTANDDENATLTAKTEKDSDGNRSGNEDSFSVSDFDELQNSVGSPLFDLDEDAKKELDEMLQSTAPPYHHPHHPHHHHHAHHAAAAAAAHHHHQRAVQAAAAPNYASVGSGPNSAFHRQAATAGGFHHGHHQSRMPPLNRSVSMEQRLQDIATFFSPIPEMPPYPHYPSYSYQGPGAGMPPSQQYGHAAGPPPPPPPHHGHPAAAMLHPNAALGDICSGPGGQPHYGHNLGSAVTSSMHLTNSSHDSDGAASGAAGNPYKMEHDMMYYTNASSDMNHNTDGFINSILNDEDLQLMEMNESFCRMVDNSTSNNSSLLGLPSSGHGSNSGSTIGALLPGGGIGHPAVGSSGVGLSMSGGGAPAGGSAAGMTADLLASGGGPQTGTDRLDASSDSAVSSMGSERVPSLSDGEWGEGSDSAQEYHRSKYGGPYDFSYNNTTRISAATRQPPVAQKKHQLYGKRDPHKHTPSALPPSGPPAATSAQVPPSAVQCQAIKYEYDAGYVDMSGSSGLQHSGSEAGAMGPALSKDYQHQQSYGMGAAGSEYSVRPPRPPRNSQEVVQHNHTYTLPQGTGSLPRPQARDKKLSSSSGSASLSEEEHLTRDEKRARALNIPIPVSDIINLPMDEFNERLSKYDLSENQLSLIRDIRRRGKNKVAAQNCRKRKLDQILTLEDEVNAVVKRKNQLTQERDSLEAERKRISNKFALLHRHVFQYLRDPEGNPCSPSDYSLQQAADGSVYLLPRDKSDSNSTATSTSSSVSSGAGLNGHGHNGAVHRLSHSQNSHHQAAQHVAMSQQQSRLPPHHPQLQQPLHHHSQHPQQQQQPPSQQPHHNAQHKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -