Llae001015.1
Basic Information
- Insect
- Lissagria laeviuscula
- Gene Symbol
- nfxl1
- Assembly
- GCA_030264695.1
- Location
- JARJDU010002508.1:14311-17305[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 3 2.1e+04 -5.0 1.9 15 19 154 158 154 158 0.85 2 21 0.57 4e+03 -1.8 0.5 4 10 189 195 189 195 0.93 3 21 2.6e-08 0.00019 21.6 16.9 1 19 203 220 203 220 0.99 4 21 1e-06 0.0071 16.6 12.4 1 18 256 273 256 274 0.99 5 21 1 7.2e+03 -2.6 1.9 6 10 299 303 298 303 0.90 6 21 4.1e-09 2.9e-05 24.2 15.0 1 19 309 327 309 327 0.99 7 21 2 1.4e+04 -3.5 0.3 6 10 352 356 351 359 0.61 8 21 1.4e-05 0.099 12.9 9.3 3 18 364 379 362 380 0.90 9 21 0.44 3.1e+03 -1.4 0.5 1 4 389 392 389 393 0.89 10 21 8.2e-05 0.57 10.5 17.1 1 18 414 431 414 432 0.94 11 21 1.7e-06 0.012 15.9 13.2 1 18 441 458 435 459 0.85 12 21 7.6e-05 0.54 10.6 5.0 9 19 507 517 505 517 0.91 13 21 1 7.3e+03 -2.6 9.5 1 12 527 537 527 537 0.89 14 21 1.1 7.9e+03 -2.8 6.1 14 19 565 570 565 570 0.90 15 21 3 2.1e+04 -4.2 8.3 5 15 583 596 579 601 0.68 16 21 3.5e-06 0.024 14.9 4.6 1 12 606 617 606 620 0.95 17 21 0.72 5e+03 -2.1 1.4 14 19 630 635 630 635 0.84 18 21 6.8e-06 0.047 13.9 16.3 3 19 647 663 638 663 0.85 19 21 3 2.1e+04 -6.4 3.0 9 13 669 673 669 673 0.70 20 21 8.4e-06 0.059 13.6 11.1 1 18 706 725 706 726 0.86 21 21 3 2.1e+04 -4.6 1.1 6 10 756 760 756 761 0.81
Sequence Information
- Coding Sequence
- ATGAATCCTCAACGGGGTAAGAAAGTTAACCCATggaataaaaatcaacaaaacaatatcaatGTTAAAAAAGgtgaagataaatttaaacaagccCAACAAAAGCTTGAAGAAGCTGTGAAGAAGTATGCGGATAACTGTGAATCatctgaagaagaagaggaactTGAAAAGGacaatattataagTACTGTATTACAACAATATGCTCAATCTGGGACCAATGCGGATATTGGAAGAAcacaaaattttcttcaagatGCCTTCCAATCTGGAACATGTACATGTCTTATATGTATATCCTCCATAAAACGCAACGAATCCATTTGGACATGTGATGAATGCTACTGCTTTTTCCATTTAATGTGCATCCAAAGATGGTCCAAAGATACCATAACTCAACAAAAACAAGCATTCGAAGCTCAAGTGCAAACGCGACGCATTACCATGAAATGGGGATGTCCAAAATGTCGCACGGAATATGCACCAGAAGACATTCCAAAAGAATATCATTGTTTTTGCAAGAAAACCATAAATCCAGGATTTCAACCACTAATGGTACCACACAGTTGTGGGGATACTTGTAATAAGAACTTAAGACCAAGTTGTGGACATACATGTTTGCTACTATGTCATCCTGGACCATGCCCACCTTGTCCTCAGACTGTTAAAACTAAATGTTATTGTGAAGCAGCTTCTGCAATACTTCAGAGATGTACTAACAAGGAATGGAGCTGTGGAGCACAATGCAGTAGGCTGTTATCTTGTGGGAAACATAAATGTTCCGATATTTGTCATGCAAATGAATGCAGACCCTGTGGGAAGAAGAGTATGCAGAAATGTCTATGTGGAGGTGGAGTGAAATTAAGAGATTGTGCTACACCAATTTGGCAGTGTGAgaagGTTTGCAAGAAGAAACTTTCATGTGGTCATCATGCATGTGAGGAAGTATGCCATCCAGGTGATTGCGATGTGTGTCCACGGTCAAAAATTCGTACTTGTCCATGCGGTAAAGCTACACATGAGTTACTTTGCACTGAAGAAGTGCCTACTTGTGGCGACACTTGCAATAAGTTACTTGATTGCGAGATGCATGTCTGTAACTTAAGGTGTCATAAGGGAAAATGTCAAACTTGTTTGGAAACTGTCACCAAGTTTTGTCGTTGCGGACAACACTCGAAGGAAGTTCAATGTGGCAAGCCCTATTTGTGCGAAACAAAATGCAAGCAGATTCGTGATTGCAATAAGCATCCGTGTAACAGAAAGTGTTGTGATGGCAATTGTCCGCCATGCGAAAAACCATGTGGGAAAACCCTAAGTTGCCGGAAACATGCATGCAATTCCATATGCCATCAAGGACCATGTTATCCTTGCAATCAAACTGAAAACGTCTACTGTTTCTGCGGTGGGACCGTTATCACAGTCCCCTGCGGACGTAAAACACGTACAAAACCTCCTAAATGTAACATTAACTGCAAaatcCCACCGGATTGTCACCATGAATTACGAGATATACACAAATGCCACTTCGGAGACTGTCCACCATGTCGCCAAATATGCAGTAAACCTTACAAAACATGTTCGCATCACTGCCTATCCAAATGTCACTCTTCAGTCCTTATAAAACTTCAAACACCAAGAGCAGCCACCCCTTGGGAGGAACGAGGACCACAAATGGAGAAACGTTGTCTACCATGTCCTCCCTGCTCAGTTCCTGTATCAGTAACGTGTTTCGGTGATCATGAAACTTGCGACTACCCTTGTCATGATGCAAGACCGCAAAGTTGTCATAAACCGTGCAATAGACAATTACCATGTGGCAATCACACCTGTGCTCTGCCATGTCACACAGTTGAAGGTGCCATTGACGATGTCACTGCCGGCAAGAACTGTGAACCTTGCACTAGAGGTTGTGGAAAGAAGAAGATCGAAGGATGCAATCACAGGTGTCCTTTGCCTTGTCATCCTGGCGAATGTCCCAATTGCAAGCACATGCTGAGAATTACATGTCATTGTGGATTGACTCAACCTTATGTTAACTGCCATGAGTGGGCGGTGACCAAGGAAAAAGAAGTTTTACAAAGTTGTGGGAATCAATGTCCTCATAATTTTCCTTGTGGACATCGTTGTAGAGCTAATTGCCATTCGGGGGAATGCCCAAATGCCGATCAATGTAAGAAGAAGGTAAAAGTCTTTTGCGAATGCAAACGCATTAAGAAAGAGCATCCTTGTGATGTGGTACGTAATGGGGAGATTCAAGTGCCTTGCGATGAGACTTGTCAACAGAAACAGAAGGAAGATGAGGAGAGTAAACGGGTTAGAGACTTGGAACGGCAGAAAGAAGAGGAGGAAAGGAATAAGAAGGAATTGGAGAAGTATGAGAAGATGTttgcgaagaagaagaatcgTGATAGGAAAATTACCAAAGAAGTGGCGGCTAATAACAATACTAGATTGTATGTTATATTAGGGATTTGTGGAGTTTTATCTgcacttattatttatttagtatttcaaaagtaa
- Protein Sequence
- MNPQRGKKVNPWNKNQQNNINVKKGEDKFKQAQQKLEEAVKKYADNCESSEEEEELEKDNIISTVLQQYAQSGTNADIGRTQNFLQDAFQSGTCTCLICISSIKRNESIWTCDECYCFFHLMCIQRWSKDTITQQKQAFEAQVQTRRITMKWGCPKCRTEYAPEDIPKEYHCFCKKTINPGFQPLMVPHSCGDTCNKNLRPSCGHTCLLLCHPGPCPPCPQTVKTKCYCEAASAILQRCTNKEWSCGAQCSRLLSCGKHKCSDICHANECRPCGKKSMQKCLCGGGVKLRDCATPIWQCEKVCKKKLSCGHHACEEVCHPGDCDVCPRSKIRTCPCGKATHELLCTEEVPTCGDTCNKLLDCEMHVCNLRCHKGKCQTCLETVTKFCRCGQHSKEVQCGKPYLCETKCKQIRDCNKHPCNRKCCDGNCPPCEKPCGKTLSCRKHACNSICHQGPCYPCNQTENVYCFCGGTVITVPCGRKTRTKPPKCNINCKIPPDCHHELRDIHKCHFGDCPPCRQICSKPYKTCSHHCLSKCHSSVLIKLQTPRAATPWEERGPQMEKRCLPCPPCSVPVSVTCFGDHETCDYPCHDARPQSCHKPCNRQLPCGNHTCALPCHTVEGAIDDVTAGKNCEPCTRGCGKKKIEGCNHRCPLPCHPGECPNCKHMLRITCHCGLTQPYVNCHEWAVTKEKEVLQSCGNQCPHNFPCGHRCRANCHSGECPNADQCKKKVKVFCECKRIKKEHPCDVVRNGEIQVPCDETCQQKQKEDEESKRVRDLERQKEEEERNKKELEKYEKMFAKKKNRDRKITKEVAANNNTRLYVILGICGVLSALIIYLVFQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -