Llae017733.1
Basic Information
- Insect
- Lissagria laeviuscula
- Gene Symbol
- pnr
- Assembly
- GCA_030264695.1
- Location
- JARJDU010041795.1:1911-6638[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.2 1.4e+04 -4.0 0.5 1 6 326 331 326 332 0.77 2 3 0.11 4.4e+02 0.8 0.1 17 27 341 350 338 355 0.80 3 3 7.5e-19 3.1e-15 55.7 6.1 1 35 385 418 385 419 0.98
Sequence Information
- Coding Sequence
- ATGACGTGCCAAATGGCAGATACACAGGCGCCTAGTGAAGCTCCCAACGAAGTTAATCTAAAGGCATCACCTACAAAAGAAGAGATCCAAGAGGAGCCAATTCCCCAAGAGAATCAAACCTCTGCATCACCTAAAGAAGATCCTCAAGAAGATTCCTCCCAAATTCAAGAAACTTTTCAATCGATTGAGGAAAACTCTGAGAATTTACAACGACCACAAGAAGACCCTAACACCGAGACTACAGAACCATCTCCTCTGGAAGATCAGAACCTAAAGGAGACTTCTGACCTTCCTACAACATCTATGATACCGAATCATAATCAAAGTGAAGATCTTAGAGTCTTAAATCAGGAGCATACTCACAAATCGACGACTTCTGTTATCAGACAGCTTACTTCTGAGGGTgcaattatcatcaaaactCAGGAATCCCCATCGCCCGATCACGTGGAACCTCTTCCAGGTTGTAGTGGTTTAGGACAACACTCACAagctcatcatcatcaacatccACATCAAGGAGGATctcagcaacagcagcagcatcaacagcaacagcaacaacatcatcaacatcaaattcaaatacCTAATGACCTTCATGGTCAGGAATATCTCAGTGATCAGTATTACTTGAATGGGGAAGAAGTCCCAGTTTTGGAATCTGGCATGATTAGTTCGAGTTATAATTTTACAGCACTTGTGGGATCAGGACAATTAGAAGGTGGTTATCCTGCCATGCAGTATATGGAATTCAGGCCTGAGAATCCTGGCAATTCGCAAATCGAATATATTGATGGGCCTTTGCAACAAGGCACGTTGCATAATAATCAAGGAATGGCTGGCAGTTTCGGGTTGAACCAAGGAGGGAattacaatcagtttgaatcAGTCAATGACTCTATGCATCAATATGGGATCCATGTAGTGATTGATCCAGCTCAACAGAATATGAGTGGACCATATATGAGACAATGCGTCAAGTGTGGACAATCTGTGGCGCATTCGTTTACTGATACAAGGGGGAATCCCGTCTGTCAAAATTGCATTGCTACTTTAGCACATTCTCAAGCGCCACGATCGCAAGCTCAAAGTAGACAACAGAAGAAAGCTAATAAAGCTGCTGCGCAAACGCGACGACAAGGCGTCGAGTGCGCTAATTGTAAAACAACGAAAACTACGCTTTGGAGAAGGAATAATCAAGGTGAACCTGTGTGTAATTCTTGTggattatatttcaaattacatGGAgtaAATCGTCCTTCGACAATGAGAAAGGAAGTAATCCAAACGAGAAAACGTAAACCGAAGAGCGGCGGTCACAATTCGACTGCAGTCAGTGTCAGCAATCATCAGCAACGTTTGATGCATCAAACACCTGTCCATCATCATCCGCATCATTCTAGAATGATGGCAGCAACACAACCTGGATACGAACCAGCAGGAAACATCAACATGCTGCAGTATCAAGATCCCTTCATTATCTCACAAGGACCACCCAACTACGGTCTACTGCGCAGTAACGCTCAAATGCCACAACCTTTGCAGCCGGTTCATGTTTACGAAGAGCAGGTGGGCGCGAACGGTGTCGGACAACAGGAGGAACAAGCGACGGTCATCACTTCCACCTCTACAGTCAGTGGAGCTTATCGAAGCACCGAACAGAATAACGACCAAGATGATTCTCAAGAtcctaataacaataatatgcaATGA
- Protein Sequence
- MTCQMADTQAPSEAPNEVNLKASPTKEEIQEEPIPQENQTSASPKEDPQEDSSQIQETFQSIEENSENLQRPQEDPNTETTEPSPLEDQNLKETSDLPTTSMIPNHNQSEDLRVLNQEHTHKSTTSVIRQLTSEGAIIIKTQESPSPDHVEPLPGCSGLGQHSQAHHHQHPHQGGSQQQQQHQQQQQQHHQHQIQIPNDLHGQEYLSDQYYLNGEEVPVLESGMISSSYNFTALVGSGQLEGGYPAMQYMEFRPENPGNSQIEYIDGPLQQGTLHNNQGMAGSFGLNQGGNYNQFESVNDSMHQYGIHVVIDPAQQNMSGPYMRQCVKCGQSVAHSFTDTRGNPVCQNCIATLAHSQAPRSQAQSRQQKKANKAAAQTRRQGVECANCKTTKTTLWRRNNQGEPVCNSCGLYFKLHGVNRPSTMRKEVIQTRKRKPKSGGHNSTAVSVSNHQQRLMHQTPVHHHPHHSRMMAATQPGYEPAGNINMLQYQDPFIISQGPPNYGLLRSNAQMPQPLQPVHVYEEQVGANGVGQQEEQATVITSTSTVSGAYRSTEQNNDQDDSQDPNNNNMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -