Basic Information

Insect: Lissagria laeviuscula
Gene Symbol: -
Assembly: GCA_030264695.1
Location: JARJDU010001432.1:6936-12261[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.069 7.5 7.5 0.2 2 21 338 357 337 360 0.88

2 18 0.00014 0.015 15.9 0.1 1 23 460 483 460 483 0.98

3 18 4.7 5.1e+02 1.7 0.1 3 20 491 508 489 510 0.89

4 18 0.1 11 6.9 0.2 1 23 521 543 521 543 0.97

5 18 0.0058 0.63 10.8 0.8 1 23 574 597 574 597 0.98

6 18 6.7e-05 0.0073 16.9 3.7 1 23 600 623 600 623 0.96

7 18 0.039 4.2 8.2 3.0 2 23 630 652 629 652 0.95

8 18 0.0051 0.56 11.0 3.2 1 21 779 799 779 800 0.95

9 18 0.0045 0.49 11.2 1.4 2 23 812 834 811 834 0.91

10 18 3.8 4.2e+02 2.0 1.1 1 23 837 860 837 860 0.94

11 18 0.003 0.33 11.7 0.2 3 23 867 887 865 887 0.95

12 18 0.1 11 6.9 0.1 1 23 891 914 891 914 0.96

13 18 1 1.1e+02 3.7 0.4 2 23 921 943 920 943 0.94

14 18 0.095 10 7.0 0.9 2 23 952 974 951 974 0.94

15 18 0.082 8.9 7.2 0.4 3 23 981 1001 980 1002 0.94

16 18 4.2 4.5e+02 1.8 2.6 2 23 1129 1151 1128 1151 0.92

17 18 0.12 13 6.7 1.1 2 23 1158 1180 1157 1180 0.95

18 18 0.19 21 6.0 0.8 1 23 1193 1215 1193 1215 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.069	7.5	7.5	0.2	2	21	338	357	337	360	0.88
2	18	0.00014	0.015	15.9	0.1	1	23	460	483	460	483	0.98
3	18	4.7	5.1e+02	1.7	0.1	3	20	491	508	489	510	0.89
4	18	0.1	11	6.9	0.2	1	23	521	543	521	543	0.97
5	18	0.0058	0.63	10.8	0.8	1	23	574	597	574	597	0.98
6	18	6.7e-05	0.0073	16.9	3.7	1	23	600	623	600	623	0.96
7	18	0.039	4.2	8.2	3.0	2	23	630	652	629	652	0.95
8	18	0.0051	0.56	11.0	3.2	1	21	779	799	779	800	0.95
9	18	0.0045	0.49	11.2	1.4	2	23	812	834	811	834	0.91
10	18	3.8	4.2e+02	2.0	1.1	1	23	837	860	837	860	0.94
11	18	0.003	0.33	11.7	0.2	3	23	867	887	865	887	0.95
12	18	0.1	11	6.9	0.1	1	23	891	914	891	914	0.96
13	18	1	1.1e+02	3.7	0.4	2	23	921	943	920	943	0.94
14	18	0.095	10	7.0	0.9	2	23	952	974	951	974	0.94
15	18	0.082	8.9	7.2	0.4	3	23	981	1001	980	1002	0.94
16	18	4.2	4.5e+02	1.8	2.6	2	23	1129	1151	1128	1151	0.92
17	18	0.12	13	6.7	1.1	2	23	1158	1180	1157	1180	0.95
18	18	0.19	21	6.0	0.8	1	23	1193	1215	1193	1215	0.96

Sequence Information

Coding Sequence: ATGGAGCGCGACGCGGCGAGGAGCAAAGAGGAGCGGTTGTGCCGGCTGTGCGCCACCATCACCACGCACCCCAATCAGCGCGTCGACATCTTCGCCGGCGATGGGCTGCGGAGCAAGATCGAAACTTGTTTGCCCGTGCATGTATTCAAAGAATCCCTGCTACCGGACACATTATGTTCCTCCTGCAACGAGAAGATATGCGCCTTCTATAATTTTCGCAAGCGTTCATTAGAAACGTTGAAAATCCTCGAAGAGAATTTCCACGTCGTGCGCAGTTGCTTCGTCTCATCATCTGCAGATCTTACAGACAAGTCGGATAAAACCACATCAACTGACAATCTCGACGTAGAAGGCTCCGAATTCGAAGAATGGCGATGCAAGAAACTAGCGAATTTCCATTACGAAACCGATTCGTTAGCAATCAAACAGCAAAACAATCGCAAACTGGTAAACTGCGCCTTGGAAATCGAAAAGGCCAACCGTCTCCTAGCCCATGGTACTGTTAACTCCACAGGATCCAGTAAACTAGTCGAATACGACTCTTCCGATGGCGAAGGACAAGACCCTGATAATGCATGTGTACAGAACGTTCATACCATGTTCAAGAACAAAATGTATTTCGACGATAAAGTCAATGATTTCATCAGTGAAATAGTTGAGAGGAAGAGTACGAAACGAAAATTTGAGACTGTGGAAGCCATTGGAGAAGGTTTCGATGACAATAGAAGGAAGATGTTCAAACCGAATTTGGCTGATATGTTCACGGGGGATTCCAGTAGACGGAAGAAACGTCCACCGGTGAAGAGGGAAGTTAGGAGTTTGGAAAATGTTGAACttcagcaacaacaacatcaaGCTCCTTTGCTATCTTACAGTAATCATTCAGTTGCTCCCCCTATGCCTGTAGGGAGGCATAACATAAATTCGTTAATGAATAGCAATAAGAGTTTCAATGAACGGCAACGTTTTGACATGGTAAAAGCGGAGGTTGTCAATGTACCTATGCCTCAGGTATGTCTACTCTGCGATCAGCAATTTAGCAAAGGTAGTGCTCTAGCAAGACATGTATTTGATACACATGGGATTGATATGGCGCAGGTGTTGAGTAGTGAACCTGTGCCTGAAGGCATGACACGAACGTTACATCAAAACTTGCAGAATTTACAACAAGAGTATTATGCCGAAAGTATAAATATGCAGGTACATGCGACGGAGGTGACACCCAAAAGTCCCAAATCCCCTAAAGTAGCTGTGAGCAGTGccgaaaagaagaagaagttacCTGAATTGGTCAAGATCACCGATTTGAAGTCAAAACGTGAGAGTATCGATATGAAACATGTGGAGAATGACGCGCCACCTACATTGACTGCAAGCTACGTATGTCCATTATGTCCAGCATCATTGACTAACAAAACCGATTTGTATGCGCACCTTCGGATAAGACACTCCACCCATGCGAAATTGATCTGTGGCTTATGCTTATACACAGCATCCTCGGTTCATAATCTTCAGGAACATGTAGATACCTGTCAAAAGAGTCATTCGTTAATAGGCTATTTCATCTGTCAAGTGTGCAAATACTCGGAGGATAATCAAAAATCCTTAGAAAATCATGTCCTTGTGCATGACTTTCTCATGATCGATAGCAAAAAAGACGGGAAGATCTTCGATCCGGCGGATTTCGTCGATATCAATGAATCCGCCGAAGCTAAGTATTACACATGCACCGAATGCGGGGTAGCACTAAGTAGTTTCAAAGAATTCAGCAGTCACAAGCGCTCCATGCATCAGATCTTCCATTGCGATTTATGTAATAAGAGCTATGGCAGAAACTCGCATTTGTGGAAGCATGTCAATCGTGTACATAAAGGCCATCCCAGTGTGACCTGTCAATTCTGTTATAAGACCTCTGCTTCAAAGTATCACCTCTTGCAGCATTTCAATAAGATACATACGCAAAAATCTAGCGAGAGCAGGGTTACCGCTATTGCTAGTACCAATAGTAATACAGGTGGAAGAATCAAAAATGGCGAGGTGCCTCTGCCGCTTCCTGATGTTGAAGAGGACGATTTTATGTCAAAGAAGTTTGAAGGTTTCGACTTTCAATCAGTCCGTCAGAGTTTCATGCGTGCGGAATTGGCAGAAGCAGCTGCTGAAAAGTATAAAGATAACATCCCCGAGGAGAAGGAAAAGCAGATGCGAAAAGTAACTGAATTCCGAGATTTGTCGGTATTAAAGATGCCTGCAGTTCCACCCAAAGAGCTAGACTCCTCTTCTACCATCTACACAAACATCATCACAAATTATACACCTCCGACGAACGATGGCGAATATAAATGTCCAAAATGTGCGAAAGGCTTCCATAAACGTACACTCCTTAAGAAACACAAGAAGAACTGCCGACCACGCTTACAGAAAGATCTCCTCACGCGCTGCAAATCGTGCTCGCGTATCTTCAAAGATCGTCAATCGTTAGCTAAGCATCTAGTGAACTACCACAGCGAGTATTCATGCGAAATGTGCGCCGAAAAGGTGCAATCCAAGTGTGAGATTGTCTCACACATTCGTTTCACTCACCCAGGCTGTCATCTTTTCTGTAGGGATTGTGGTAATGTCCTCCGAAACAATGACCTCCTCCGTGCGCATCTACAAGATCATGCAAACTCATTCGTATGTCAGTTTTGCGGGGACGTATTGCCCTCGAAAATCAAACTCAAGATGCACATCTTGTCCTTGCATCGTAAGATACTTAGCTTGTCATGCGGTGTATGTCTCAAACTCTTTGAAAGTCAACATATCCTCCGTGATCATGTGCGTCTTGTACATCGCGAGGCACTCCAACCATTGACCAGTTGCACTGTCTGTGGAAAAAACTATGGATCCAAATGGAAAACGTATGATCATCTTAACAAATCCCATGGGAGAGTGTTCAAAGCATGTAAGAGCTGTCTCGAGGTGTTTAATAACGATCAAGAGTTACAAGCGCACGTTGATATGCATCATTCCAAAGGGATGAAGAAATATGTCCCTAATGAGATTGAGCAAGCGCATGCGCAGGTTACAGTACCAACTACACCAAAGCCACCTGAACCAAAAATCACCGTTAAAGAAGAGAATCATAATATAAGTCAAGAGGAACCTATGGAGGAAGACGAATCCGAAGAAGAAGTTCGTGACGAGTACGAAGGTAAATCTATTCTTGAGAAGCATCTTGTTGGTGCGTATAATGTACAAagagtaaataataatcaatcgaATGCGAAACAAAATGGACTCTCGTCGTCGTACGCGGCGCCATCCATTCCTAAAACTGCTAAGCAACATGCGGACGAGTTGAATTCGAGTAAAAGGACTGTGTATGTCAACTCGAATGATCCTTCGGTCTGCGATATTTGCTTTAAGAAATGGCCCGCGAAGAAACATCTCTGGCAGCATTACATTCGATGTCATAAAACTGTCGCTGCAACCGTTTGTGGTATCTGTTTGAAAACCAATAGTACGTATGAAGAGCTACAAAGGCATTTGCATCGCGAGCATCCGACGTTGTTGCATGGTAAAGGATTCGGATCAAACTTCATTTGTAGGATTTGTGGACGGTATCACAACGCTAGCTCGAAACTGCGACTACATATGGCTATCCATATCAAATTCGATTGGGGATTGTTAGGACAATTGGAGAATAATATTCAGACAAAGAACAACGAAGtacaacaacaagaagacGAGGAGGAAGAGGATGACGATGAGGATCAAGAGGAAGAGGAAACTAAAGTGAAAGAGGAGATCATCACCGAGGGTGAAGTCAATTTTGAGAGTATGATGGAGCAAGTAGAAGGTAGCACGAATTCTTCAAGTAGTTCGGAGAGcgatgacgatgatgatgacgatgacgacgaggatgatgataatgaagaagaagaagatgaggaGGAGGaggatgataataatgatgatgaggatcaagaggaagaagaggaaaaagtTCAGCAAGTGATTAAGCATGAGGATAATGGATCTGAATCTATAGAAGAACAACAAGTTGAAGAGGAGGAGAATGATGAAAatgacgaagaagaagaagaggatgaGGATgatgaggaagaagaagaagaggaggaGGACGATGATCAAGAGGAAGTAACCGAGGAACAGGGAGAAATTATTAAGGCTGAGGAGCATGAGGAACAGATGGAGGAAGATGTGGAAGGGGAAGAAGGTGAGGAGTATGAAGTTGTTGAAGAGATGGTACACCAAGGGGAAATAACTATTTACCAAGAGGAAGAAGTAATGCAAGAGGAGCAAGAGGTTTATGCTGATGAAGAAGGTGAGGAAGAGGAGGAGGAACAAATTGTCATTAGTGAAGTTATTGAGGAAGGGGAAGTAGAATTAGAGGACAATGATGAGGTTTTAGAGGAAGATGAAGATTATGAGGAGggagatgatgatgataatgatgataatgatgatggtgatgatgatgatgatgatggtgacGATGATGGTGGTGGGCAAGAGTATGTACCAGATGAGGCACAGAATCAAGCTGTGCAATCAATTTGTTATGATGAAGACAGCTGTCAGGCTAATGAAGTTGTTGAAGAGTATGAAGTTCAGACACATAATACCAGTCTCAATACACAACATGAGATACAAAGTGCTGTTGATAGTATTTTATAA
Protein Sequence: MERDAARSKEERLCRLCATITTHPNQRVDIFAGDGLRSKIETCLPVHVFKESLLPDTLCSSCNEKICAFYNFRKRSLETLKILEENFHVVRSCFVSSSADLTDKSDKTTSTDNLDVEGSEFEEWRCKKLANFHYETDSLAIKQQNNRKLVNCALEIEKANRLLAHGTVNSTGSSKLVEYDSSDGEGQDPDNACVQNVHTMFKNKMYFDDKVNDFISEIVERKSTKRKFETVEAIGEGFDDNRRKMFKPNLADMFTGDSSRRKKRPPVKREVRSLENVELQQQQHQAPLLSYSNHSVAPPMPVGRHNINSLMNSNKSFNERQRFDMVKAEVVNVPMPQVCLLCDQQFSKGSALARHVFDTHGIDMAQVLSSEPVPEGMTRTLHQNLQNLQQEYYAESINMQVHATEVTPKSPKSPKVAVSSAEKKKKLPELVKITDLKSKRESIDMKHVENDAPPTLTASYVCPLCPASLTNKTDLYAHLRIRHSTHAKLICGLCLYTASSVHNLQEHVDTCQKSHSLIGYFICQVCKYSEDNQKSLENHVLVHDFLMIDSKKDGKIFDPADFVDINESAEAKYYTCTECGVALSSFKEFSSHKRSMHQIFHCDLCNKSYGRNSHLWKHVNRVHKGHPSVTCQFCYKTSASKYHLLQHFNKIHTQKSSESRVTAIASTNSNTGGRIKNGEVPLPLPDVEEDDFMSKKFEGFDFQSVRQSFMRAELAEAAAEKYKDNIPEEKEKQMRKVTEFRDLSVLKMPAVPPKELDSSSTIYTNIITNYTPPTNDGEYKCPKCAKGFHKRTLLKKHKKNCRPRLQKDLLTRCKSCSRIFKDRQSLAKHLVNYHSEYSCEMCAEKVQSKCEIVSHIRFTHPGCHLFCRDCGNVLRNNDLLRAHLQDHANSFVCQFCGDVLPSKIKLKMHILSLHRKILSLSCGVCLKLFESQHILRDHVRLVHREALQPLTSCTVCGKNYGSKWKTYDHLNKSHGRVFKACKSCLEVFNNDQELQAHVDMHHSKGMKKYVPNEIEQAHAQVTVPTTPKPPEPKITVKEENHNISQEEPMEEDESEEEVRDEYEGKSILEKHLVGAYNVQRVNNNQSNAKQNGLSSSYAAPSIPKTAKQHADELNSSKRTVYVNSNDPSVCDICFKKWPAKKHLWQHYIRCHKTVAATVCGICLKTNSTYEELQRHLHREHPTLLHGKGFGSNFICRICGRYHNASSKLRLHMAIHIKFDWGLLGQLENNIQTKNNEVQQQEDEEEEDDDEDQEEEETKVKEEIITEGEVNFESMMEQVEGSTNSSSSSESDDDDDDDDDEDDDNEEEEDEEEEDDNNDDEDQEEEEEKVQQVIKHEDNGSESIEEQQVEEEENDENDEEEEEDEDDEEEEEEEEDDDQEEVTEEQGEIIKAEEHEEQMEEDVEGEEGEEYEVVEEMVHQGEITIYQEEEVMQEEQEVYADEEGEEEEEEQIVISEVIEEGEVELEDNDEVLEEDEDYEEGDDDDNDDNDDGDDDDDDGDDDGGGQEYVPDEAQNQAVQSICYDEDSCQANEVVEEYEVQTHNTSLNTQHEIQSAVDSIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -