Basic Information

Insect: Lissagria laeviuscula
Gene Symbol: ZNF236
Assembly: GCA_030264695.1
Location: JARJDU010003765.1:3106-8393[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.0057 0.62 10.9 0.9 2 23 95 116 94 116 0.97

2 25 0.0004 0.043 14.5 0.7 1 23 122 144 122 144 0.96

3 25 2.4e-06 0.00026 21.5 0.1 2 23 150 171 149 171 0.95

4 25 0.0066 0.72 10.7 0.6 1 23 177 199 177 199 0.97

5 25 5.9e-05 0.0064 17.1 0.3 1 23 213 235 213 235 0.97

6 25 0.002 0.22 12.3 7.4 1 23 260 282 260 282 0.98

7 25 1.2e-06 0.00013 22.5 1.5 1 23 288 310 288 310 0.96

8 25 0.00024 0.026 15.2 2.2 1 23 316 339 316 339 0.97

9 25 0.004 0.43 11.4 4.9 1 23 349 372 349 372 0.96

10 25 3.8e-07 4.1e-05 24.0 0.8 1 23 489 511 489 511 0.96

11 25 7.7e-07 8.4e-05 23.0 0.5 1 23 517 539 517 539 0.99

12 25 0.00025 0.027 15.2 1.3 1 23 544 566 544 566 0.98

13 25 2.4e-05 0.0026 18.3 0.4 1 23 578 600 578 600 0.98

14 25 3.4e-05 0.0037 17.9 3.3 1 23 657 679 657 679 0.98

15 25 0.0045 0.49 11.2 0.0 1 23 685 707 685 707 0.96

16 25 1.2e-05 0.0013 19.3 0.2 1 23 713 735 713 735 0.97

17 25 0.0077 0.84 10.5 5.5 1 23 741 763 741 763 0.98

18 25 0.00018 0.02 15.5 1.5 1 23 1085 1108 1085 1108 0.95

19 25 0.89 97 4.0 3.0 2 23 1115 1136 1115 1136 0.96

20 25 1e-06 0.00011 22.6 0.7 1 23 1142 1164 1142 1164 0.98

21 25 3.6e-06 0.0004 20.9 1.7 1 23 1172 1194 1172 1194 0.98

22 25 3.9e-06 0.00043 20.8 9.1 1 23 1200 1222 1200 1222 0.99

23 25 1.8e-05 0.002 18.7 0.9 1 23 1333 1356 1333 1356 0.96

24 25 4.2e-05 0.0045 17.6 0.7 1 23 1359 1381 1359 1381 0.98

25 25 0.00033 0.036 14.8 1.7 1 23 1387 1410 1387 1410 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.0057	0.62	10.9	0.9	2	23	95	116	94	116	0.97
2	25	0.0004	0.043	14.5	0.7	1	23	122	144	122	144	0.96
3	25	2.4e-06	0.00026	21.5	0.1	2	23	150	171	149	171	0.95
4	25	0.0066	0.72	10.7	0.6	1	23	177	199	177	199	0.97
5	25	5.9e-05	0.0064	17.1	0.3	1	23	213	235	213	235	0.97
6	25	0.002	0.22	12.3	7.4	1	23	260	282	260	282	0.98
7	25	1.2e-06	0.00013	22.5	1.5	1	23	288	310	288	310	0.96
8	25	0.00024	0.026	15.2	2.2	1	23	316	339	316	339	0.97
9	25	0.004	0.43	11.4	4.9	1	23	349	372	349	372	0.96
10	25	3.8e-07	4.1e-05	24.0	0.8	1	23	489	511	489	511	0.96
11	25	7.7e-07	8.4e-05	23.0	0.5	1	23	517	539	517	539	0.99
12	25	0.00025	0.027	15.2	1.3	1	23	544	566	544	566	0.98
13	25	2.4e-05	0.0026	18.3	0.4	1	23	578	600	578	600	0.98
14	25	3.4e-05	0.0037	17.9	3.3	1	23	657	679	657	679	0.98
15	25	0.0045	0.49	11.2	0.0	1	23	685	707	685	707	0.96
16	25	1.2e-05	0.0013	19.3	0.2	1	23	713	735	713	735	0.97
17	25	0.0077	0.84	10.5	5.5	1	23	741	763	741	763	0.98
18	25	0.00018	0.02	15.5	1.5	1	23	1085	1108	1085	1108	0.95
19	25	0.89	97	4.0	3.0	2	23	1115	1136	1115	1136	0.96
20	25	1e-06	0.00011	22.6	0.7	1	23	1142	1164	1142	1164	0.98
21	25	3.6e-06	0.0004	20.9	1.7	1	23	1172	1194	1172	1194	0.98
22	25	3.9e-06	0.00043	20.8	9.1	1	23	1200	1222	1200	1222	0.99
23	25	1.8e-05	0.002	18.7	0.9	1	23	1333	1356	1333	1356	0.96
24	25	4.2e-05	0.0045	17.6	0.7	1	23	1359	1381	1359	1381	0.98
25	25	0.00033	0.036	14.8	1.7	1	23	1387	1410	1387	1410	0.97

Sequence Information

Coding Sequence: atggAACTAGCAGTACAAGATATAGAAATTTCAGATGGATTATCGTTACCTCTCAATTCAATATCAGTGGATTCGCAAAAACTTTCAcagcaattaatatttaagacaTTAACAGGAGAAAAGTTCCAAATCTTTATAACAACTGAACCTCTACaagaacaacaaacaacacaaGAAAGTAATGCTTCAAATTGTAATCAAACTGCATATGAAGAACCACAACAGCAGGTACTAGAGAAGccaaaattgaagaaagaagTTGAAAGGAAAGATCCTAGCATAAAGTGTCCATTATGcttaaaagtttttgataagTTATCTAAATATCGATATCATGTTAAGCAACATCAAAACCCCAAAAAGTTCCAATGCGATTTATgtggttttagttttaataaagaagtcaattacaaaattcacAGAGCATTGCATAATAATGGACCTGTGGTATGTCCCATTTGTGATAGAAGATTTAAAAGGAATGCTAGTCTAAAAGCACATTTAGTTATCCATGAAGTGGAAGAGACTTTCAGTTGTTTACATTGTAAAGTTGAATTTGATAAGGAGGATGAATTGCTGCAACATTTGGAAGTACATGAAGGAGAGGAAATAGACCTAGAACAAAAGGAGACTCATTTTAACTgtgattattgtaattatgtatttgaGGATGCTGAGAAATTAAGGGAACATTTACAACTGCATATTCAGGCAAAAAGATTTGTGAACAGTGGAAGGAGTCGATTAAAAAGAAAAGGCAAACCTAGAGAATATGCACATAAATGCAagcaatgtaataaaagttttgcaaaGCTGTGTTTATTATTGCGACACCAATTTACTCATACAGGAGAGAAACCTTTTTTGTGTACAATATGCAAGAAAAGTTTTTCACAAAAAGGTGCTCTTCAGATACATAGAAGACGCCATGAAGGCTATAAACCCCATAAATGCATGTTTTGCCCATCAAGCTTTGTCCAAAAAGGTAATCTTAAAGCTCATCTGCAAAAAACTCACACAGCATCGAAACCAGATgagaaaatgtataaatgttcACATTGTACATGTGTCTTTAAGAAGCTGTCCTCTTTAAACGGTCATGTGACACgaattcattcaaattgtATTCAGGATAATGATGAGCCGGATATAATGAATGTAATATCTCAGCTTAAGGAACTTAATGGACAATCGGCGTCTACTCAGCAACAACATCAGGATCAAACTCAAGATATGCATGCATCTGAGACTCAGAATGGCATTCAAAGACAAAATCAGggattaatttatgataataatactttaaCTGTGGATACTAGTCAACATTTTAATCCACATGAACAACAAACTCATGACAACATACAAACTTCACGTGTATCTTACGTTAAAATTGCTGATAGTAGTATTAAAGGTAGTTATaggaattatattattaaacaaagaaCTTTTGGTGAACATCGATGGTATCTATGCTCATATTGTAATAAGGAATTTAAAAAGCCATCTGATTTAATTCGGCATTTACGAATTCATACAAGGGAGAAGCCTTATAAGtgTTCTGAATGTGGCTTAACATTTGCTCAGAAATCAACTGTGAATAATCACATGGCTACTCATGTAAAAAACGAATTTGAATGTGCTATTTGCAAGAAGAATTTTGGATCTATGCGATCACTTAATACgcatttaaagaaaCATGATCAGACTGCAGTTGCTCGTAGAAATCCTTCATATAAATGTTCAGGCTGTGAAAAAACTTTCGACACATGGGAAACGGCGAACTTACATATGAAGCTACATGAAGTAGTTCCCGATGAGAGTTTACTCTTAATAGAGAAAGATATTGAGACGTCGACAAGAGTGAATATGTTACAACCCTTGATTGAAACAGATCAAGGATTGTTTCCCATTCCACCGCCGAAACCGAAAGTTCCTCTTGCATCATATGAAGAATATAAAGATAGACAATTTAAGTGTCATGTTTGTGATGCTGTTTTTGTGCGAGGCGCACATTTGCGGAAGCACATGTTTAAGCATAGTACAAGGAGGGATTTTGTATGTCCTGTATGCTCTAAGCAGTTTGCTGCTGAATCAGTTTTAAAAGATCATCTAGCAAATCACACCAAGCCCAAAAAATATGCTTGTTCAGATTGTaataaagcatttttaaatgcaagCATGTTACAAAGACATATGATTTCTCATAAAACAGTGAAACTGTATATATGTCCGTATTGCAAGAAACGTTTTCGAGCTAAAGAACATTGTTGGAAACATATTTCGAGACATAAACTTACAGCTCCTAATTTGATCTTTCCACAAAACAATGATGGAAATATGAATGAAAGTAATATCAATGAGGATCCCAGtgatttgatttcttttaataacttattaaacgaaataaatttacaagaagACCAGACTCTTGAACTTGTTGAAGAAAATGATTTAGCATTAGAACCAGTATCTGGAATAAGTGGAACTACAAAGGAGCAAAATTCAGCTCAAATCAACATCCAAGAAGGTGGTACAACTCAATGGTTTTATAATTGCGAAGATTATCAGTTATTAGCAAATAGTGAAACTGGATTAGCCCCACAAATTAACTTACAGaattcaGATGAATCGCTTCtaaatcaaataacaaatCTTCAAGAACCAACCACTTATGGactaattgaagaaaatcCTAGCATAATTCTTGGCACAGAGGGTCAAATGACTATACATGCAGATACATTCAATCCGAATGTCATTTTTAATCCAACATTTGATATTGAATTAACTCCTATTCCTAAATCTCATGATTCTGAATTTACTGGTACTGTTGATATACCTAATGATAAACAACTACCAATCGATATAAATGCCATTATCTCAGATAAATCAACAGAAGGCACAGAGACTTCAATCCCAGATCAATTAATACTCAATTCTGTAAATGAATCTAGTGATAATACAGTGAGAGATatgaattactttaatatcaGTCTTAAGGACTTTTTAGAAGGATCGCAATTACAATTGCCACCTGAATATGTCAACACAAAAATCGATAGTTTACTCATTTGTACTAAATGTAATGGAAGAATATCCAATCTAGATGTGTTACATGAATGTCCACCAGATATTATTGACACTACTTTAACATCTGAAACAATTTCCGAGGAACCATCCGAAAATAACCCTCCCGAAGGGAAAACGCCTTTAAACGATATTGAATTGGCTAAAAATGAACTTTTGATTACTTTTACTTGCTCCAAatgtagtaaacaatttaatgatattaaaggACTTAATAGACACATGTCTGCTAAACATAAAACTGCTAAGAACAATACGTGCCCGTTTTGTTGCAAGCAAATCGACAAGAAATCGGACATggacAGACATATTAGAACTCATACCGGTGAAAAACCATTCGCTTGTACTAAATGTGATAAAgcatttgcaatcaaatcCACTCTCATGTCGCACATGAGAACTCATGATCCTAACGACATTAAAGAGTTTCAATGCAAAGTCTGTAATTCCCGCTTTAGAACAAAATCAACCCTGAAAATTCATATGATCATTCACACCGACAAACAACCTTTCCGATGCGAGATTTGTGACAAAACATTCAAACACAATCATCACTTGAAAACCCACTTGCAGACGCACGAAAACAAATCGAAAAAGACATCCTCTAATACCAAAATGACCGCCGTTAATTTCCTACAGTCTTTagtatttgaaacaaatgataaaatcCATGAAGAGCAACGAAAACTACAAACGGAATCAGTTCCTGAAGAAATAATTCCCACGGAAAATTTATTCTCTCAACAATTACCAGTCTTTGGTGATAATATGGATCCTGTAACAATTACAGTGTCATATGATTCACAGttgcaattcaaaattgatgataatatgGTTATACCTTGCGACAAAACTGATTATTTGACGCCAGAAGCAGAGTTTGTTCAGCCTTCGATGAAAGAGAAGAAGTTTCGATGTGACATCTGCGATAAGTTTTATGTTAGCAATTCGGTGCTTAGAAAACATCGACGGGCACTACATGGGGACTATAAATGCGATAAATGTAGTAAGGCTTTCAATTCGATTGAGCTATTGGAGAAACATTATATTTCGCATAATGGTCCTCGGCCGTTTCCATGTACGGTCTGCACGAATAGTTTCTGTAATGAAGCTAGCCTTAAAGTGCATTTGAAAagaatgcATCCCAGCGATCAGGAATAA
Protein Sequence: MELAVQDIEISDGLSLPLNSISVDSQKLSQQLIFKTLTGEKFQIFITTEPLQEQQTTQESNASNCNQTAYEEPQQQVLEKPKLKKEVERKDPSIKCPLCLKVFDKLSKYRYHVKQHQNPKKFQCDLCGFSFNKEVNYKIHRALHNNGPVVCPICDRRFKRNASLKAHLVIHEVEETFSCLHCKVEFDKEDELLQHLEVHEGEEIDLEQKETHFNCDYCNYVFEDAEKLREHLQLHIQAKRFVNSGRSRLKRKGKPREYAHKCKQCNKSFAKLCLLLRHQFTHTGEKPFLCTICKKSFSQKGALQIHRRRHEGYKPHKCMFCPSSFVQKGNLKAHLQKTHTASKPDEKMYKCSHCTCVFKKLSSLNGHVTRIHSNCIQDNDEPDIMNVISQLKELNGQSASTQQQHQDQTQDMHASETQNGIQRQNQGLIYDNNTLTVDTSQHFNPHEQQTHDNIQTSRVSYVKIADSSIKGSYRNYIIKQRTFGEHRWYLCSYCNKEFKKPSDLIRHLRIHTREKPYKCSECGLTFAQKSTVNNHMATHVKNEFECAICKKNFGSMRSLNTHLKKHDQTAVARRNPSYKCSGCEKTFDTWETANLHMKLHEVVPDESLLLIEKDIETSTRVNMLQPLIETDQGLFPIPPPKPKVPLASYEEYKDRQFKCHVCDAVFVRGAHLRKHMFKHSTRRDFVCPVCSKQFAAESVLKDHLANHTKPKKYACSDCNKAFLNASMLQRHMISHKTVKLYICPYCKKRFRAKEHCWKHISRHKLTAPNLIFPQNNDGNMNESNINEDPSDLISFNNLLNEINLQEDQTLELVEENDLALEPVSGISGTTKEQNSAQINIQEGGTTQWFYNCEDYQLLANSETGLAPQINLQNSDESLLNQITNLQEPTTYGLIEENPSIILGTEGQMTIHADTFNPNVIFNPTFDIELTPIPKSHDSEFTGTVDIPNDKQLPIDINAIISDKSTEGTETSIPDQLILNSVNESSDNTVRDMNYFNISLKDFLEGSQLQLPPEYVNTKIDSLLICTKCNGRISNLDVLHECPPDIIDTTLTSETISEEPSENNPPEGKTPLNDIELAKNELLITFTCSKCSKQFNDIKGLNRHMSAKHKTAKNNTCPFCCKQIDKKSDMDRHIRTHTGEKPFACTKCDKAFAIKSTLMSHMRTHDPNDIKEFQCKVCNSRFRTKSTLKIHMIIHTDKQPFRCEICDKTFKHNHHLKTHLQTHENKSKKTSSNTKMTAVNFLQSLVFETNDKIHEEQRKLQTESVPEEIIPTENLFSQQLPVFGDNMDPVTITVSYDSQLQFKIDDNMVIPCDKTDYLTPEAEFVQPSMKEKKFRCDICDKFYVSNSVLRKHRRALHGDYKCDKCSKAFNSIELLEKHYISHNGPRPFPCTVCTNSFCNEASLKVHLKRMHPSDQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -