Llae008827.1
Basic Information
- Insect
- Lissagria laeviuscula
- Gene Symbol
- SMARCC2
- Assembly
- GCA_030264695.1
- Location
- JARJDU010021190.1:2-2206[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.9e-15 7.8e-12 45.3 0.1 3 44 357 398 355 400 0.95 2 2 4.4 3.8e+03 -1.7 1.2 6 17 505 516 504 520 0.86
Sequence Information
- Coding Sequence
- AGTCATAGTGGGCCATGGCGAGTGTCATCAACTTGGTTAATTGATTCAGATCAATATAACGAATGGATGAGCGAAGAGGATTATGAAGTTGATGAGAATggtaaaaagaaaattcataaattgcGGCTTTCTGTTGAAGACCTTATGAATCCTGGTGACGATAAAAACAAaaagaaatacaaaagGAAACGATCCCCATCTCCACCACTGCTGAAAGGAGGTAAACGAAAGAGCGGCAGGAGTCCTGCGATCGGTAAAAAAACACGTCCCGACGAAATGGAATCCGAAGATTTGACAAAAGAAATGGACGATCCTTTGCCGGAACCTAACATTACTGAAGTTAATGCCCCATCTACACCAGTTGCTCCAACCGGTAAGAAAGATCACGAACTGCAACCTCTTAAAGGTGGCTCTATTACGGATTTAGATGAAACTGATGAACGTGGAGATGACTCTCAAACTGGTAAAAACTCTGACACTACAACCCAAGACGATGGCCAAGAAGATAATGTCACTGAGCAAACTCACCACATCATAGTTCCCTCATATTCCGCATGGTTTGACTACAATTCCATTCATGAAGTGGAAAAACGTGCGCTGCCAGAATTCTTCAATGGAAAGAATAAATCCAAGACGCCTGAGATTTACCTTGCTTATAGAAACTTCATGATCGACACTTATCGCTTAAACCCAACTGAATATATCACCAGCACGGCCTGTAGACGAAACCTAGCTGGAGATGTCTGCGCTATTATGAGAGTCCATGCATTTTTAGAACAATGGGGTTTAATCAACTATCAAGTTGACACCGAATCTCGCCCTACACCTATTGGACCACCACCCACTTCTCATTTCCATATCTTGTCAGATACACCTTCTGGTCTTCAGCCTGTCAATCCTCCAAAAACGCCGCAACCCAGCGCTGCTAAAACTTTACTAGATTTGGATAAAACTATTGAACCTAAGAAAGAAACGCCTGATCCGATTTCTAACTTTGGATTAAAACTGGATCAGTATTCGAAGAAACCGAGCGCCATGAAGAATAAGAGCGCTGCTGCGATGGCAAGAGACTGGACTGAGCAAGAAACACTTTTGTTGCTTGAAGGCTTGGAGATGTACAAAGACGATTGGAATAAGGTTTGTGAACATGTGGGTTCTCGAACACAAGATGAATGTATATTGCATTTCTTGCGATTACCTATTGAAGATCCTTATTTGGAAGATCCAGAAGCTGGTGGTGCTCTAGGTCCTTTAGCTTATCAACCTATTCCGTTCAGCAAGTCGGGTAACCCGATCATGTCGACAGTGGCATTTTTGGCTTCTATTGTAGATCCTCGAGTAGCCGCCGCAGCTGCAAAATCCGCCATGAATGAGTTTGCTAGTATTAAGGACGAAGTGCCTGCTGCACTGATGGATGCTCATCTGAAAAATGTAGAGGCTTCTTCGACTGATGGGAAGTATGACCCTGCTGCTGGATTAGCATTAAGTGGCATAGCTGGAACTGTCCCTGAGAAGGAAGAGGACGATAAGATCAAAAAGGAAGTCGATTTGAAAGAAGACGAAAAGGTAGACGGAGAACAAAAGAAGAATGGGATTGAAAGTGCAGAGGATGGTGAAAAAGCACCGAAATTGGAACCGCAAGAGGAAAAAGAGGAATCGATGGATGTTGATCTGAAGCCTGAGAAGGTAGTAAGGGATAGTGAAATGCAGAGTGCTGCAGCGGCGGCTCTTGCTGCAGCAGCTGTAAAAGCTAAGCATTTAGCTGCTGTCGAAGAGAGGAAGATCAAATCTTTAGTTGCCTTGCTCGTTGAGACGCAAATGAAGAAATTGGAGATTAAGCTGCGACATTTTGAAGAACTTGAAACAACGATGGAGCGAGAACGGGAGGGATTAGAATATCAACGGCAGCAGCTCATCACCGAGAGGCAGCAGTTCCATTTAGAGCAATTGAAGGCAGCGGAGTTTAGAGCTAGGCAACAGGCACATCAACGACTTCAAGCTGAACAAGGACAACAATGGAATCAACAACCTCCGACTGCTACACATACAAATACTGAGGTATCTGCTAGCACGACACCTACACCACCATCGCCTCAGGCTGCAGCAGTGGCATCACCTTCTGGTGCACATCATCATATTTAG
- Protein Sequence
- SHSGPWRVSSTWLIDSDQYNEWMSEEDYEVDENGKKKIHKLRLSVEDLMNPGDDKNKKKYKRKRSPSPPLLKGGKRKSGRSPAIGKKTRPDEMESEDLTKEMDDPLPEPNITEVNAPSTPVAPTGKKDHELQPLKGGSITDLDETDERGDDSQTGKNSDTTTQDDGQEDNVTEQTHHIIVPSYSAWFDYNSIHEVEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDTESRPTPIGPPPTSHFHILSDTPSGLQPVNPPKTPQPSAAKTLLDLDKTIEPKKETPDPISNFGLKLDQYSKKPSAMKNKSAAAMARDWTEQETLLLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDPEAGGALGPLAYQPIPFSKSGNPIMSTVAFLASIVDPRVAAAAAKSAMNEFASIKDEVPAALMDAHLKNVEASSTDGKYDPAAGLALSGIAGTVPEKEEDDKIKKEVDLKEDEKVDGEQKKNGIESAEDGEKAPKLEPQEEKEESMDVDLKPEKVVRDSEMQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLQAEQGQQWNQQPPTATHTNTEVSASTTPTPPSPQAAAVASPSGAHHHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00620499;
- 90% Identity
- iTF_00620499;
- 80% Identity
- -