Lhae010684.1
Basic Information
- Insect
- Liopterus haemorrhoidalis
- Gene Symbol
- stc
- Assembly
- GCA_963971575.1
- Location
- OZ020611.1:158847647-158880774[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.98 6.9e+04 -4.1 1.6 15 19 652 656 651 656 0.81 2 10 0.069 4.8e+03 -0.4 0.1 4 10 685 691 684 692 0.93 3 10 2.2e-06 0.15 14.0 14.5 4 18 702 716 700 717 0.93 4 10 2e-06 0.14 14.1 11.8 1 19 753 771 753 771 0.99 5 10 0.2 1.4e+04 -1.8 1.2 6 10 801 805 800 805 0.90 6 10 5.7e-11 4e-06 28.6 14.2 1 18 811 828 811 829 0.98 7 10 3.4e-08 0.0024 19.8 14.0 4 19 876 891 869 891 0.89 8 10 0.55 3.9e+04 -3.3 2.2 5 10 920 925 920 925 0.93 9 10 0.068 4.8e+03 -0.4 7.9 1 11 931 941 931 953 0.90 10 10 1.2e-10 8.4e-06 27.6 12.2 1 19 958 976 958 976 0.98
Sequence Information
- Coding Sequence
- ATGGCCCAATGGAATCCCTATTATGGTGCTCCCTCAAATTCTGTTTTCGAAGAACAAAATTTAGAATCACAAGTATTCAATCCATCTGTACCTTATGGTGCAATACCATATCAAACAGTAAATTATAACAATTATTATGTGCCCAACGTTACAAATTATAGACCAAATTTACCTAGTAACATACGTACTGCCCAAGATATCGAAGCCGAACAGTTCAGTCAATATATGAATCAAATTCCAACGCAACATGTTGTGCAATCACAATATTTACCAGATAGATCAACACAATCACCTGTTTATTCTACGTTAACTCCAACTGCTGCCGAATTTAAACCAAGTACAAGTTATGCTCCAATTGTAAGTCAAACATTTAGTAATAacaactataaaaatattgaaagtgataaaaaaattgaggtTAAGTCAGAAAGTGAACCTTCTACAAGCAAGATAAATGAAGGGGAATCCCCTAAAcctgatatattttcaaaacctAACAAACAGTCATATAAAACTGATAATGATAGATATAAACATGACAATAGAATGAAAGATAGTGCTAGGTACAGGGAAAATAAAGATAATGGTAGATACAGAGAAGATTATAAAAAGAGTGATGCTATCAGGTCAGATAATTCAGGTAATTTTGAAAGATACAAACAAGGGGAGAGAGATAAAGATAAGCATGAAAGATACAGGCAGGGTAATCAAGAAAAGGATGatagatataaacaaaacagGGACAATAATGACAGAAACAGACAGAATAATGATAGATATAGACAGggagataataaatattatagaaaCAGACCAGATGGAGAACAAAACGATAGATTCAGACAAGGCAGTACTGATAAAGATAATTTGGATAATAAAAGCAATGCTACTACCTCTCAAGATaccgaaaataaagaaatgagTAACAGATACCAACAAAATAGAGGAAAGGGAAATGATAGGTATAATAGAAATATTGAAAAGGAAAATCTAAATAAAGGCAGATATGATAACAGGGTTAAAAGTGGTAACACACAAGATAGGGGAAATAGGGTGAGTAACAGATACCAGGAAAGAACAAGTAACAGCAATAGGCAAAGCAGTTCAGAAAAAGATATCAATAAAGATAGGTTTGATAGAGCTGGCTCAAGTAAGAGTGAAACCAACATTGAAAACAAGAGAGATAATAGAGAGACCGTGTATCAAAGTACAGATGTAGATGGAATGAACAGAAACTCTAGTACAGAAAAGGATAATCAGGATAGCGATAATGCAAGCACAAGTAAAGCGCAAGATAATAGAGACAACAAATATCATCAAAACAGGGAAAATCGATACAAGGAGAACTATTCTGGCAGATATAGACAGGATAACAGAGAAAATAAGAATGATAGATATTCGCAAGATAGAGATTGGAGGGATAATAGAGATAATAGAAGTTATAGGAataattacaacaaaaattacAGAGATCAAGATTCATATCAACGGGAATATTATGGCTCCAGAAACAACAGATATAGTAAGAACAATGGGGAAGGTGGACAGAACAGAAGTTACGAGTATGAGAGATCTAATTCAGATGGATATAAGGGTTCCAattctaaaaattcatatcGCGATAATCAGAAAGAAGAAGTTAAGTATGAAAATTGGAGAAGCAACATGCCTTCTATacgtaaagaaaaaatagtaaaggAAGGTAGGAAAGGTGATTATCAGAAGCCCAGTTCTTCTAAAACAGGGTTAAAACCTGTTAAAAACGaagCTGACATTTCTCAAAGAGAAAGATTGATTGAACAAGTGAACAAAGGTACCTTGGAATGTTTGGTTTGTTACGAGTTTGTTCGTCATGTTGATAAGGTTTGGTCTTGCCAGAAGTGTTATCATGTATTCCATCTTCGCTGCTGTTTGAAATGGGCTAAAACATCTCAAGATGAAAAGGGTTGGAGATGTCCTGCTTGTCAACATGTGTATATGAATTTACCACAGAGTTACTCTTGCTATTGTGGAAAGTCGATGGATCCTGTATACAGACCAGGAGACACTGCCCACAGCTGCGGCAATGTATGCGGTCGTCCTGGTATTAAACCAGGCTGTCCACACACTTGTAGATTGCTCTGCCATCCTGGACCATGTCCTGTTTGCGAAGATTTAATATCCAaGAGTTGCAGTTGCGGAGCTACTAAGCAAATTGTGAAATGCAGTGCTTCTATACCTTTAGTCTGTAAAGCTATATGCAGCAAGACTTTGAATTGTGGTGTTCACATTTGTCAAAAGACATGTCATCCGAGTGAATGCGACGTTTGCCCAGAGACAATTGATCaagaaTGTTTCTGCGGAAAAGCTAAGCGTAATATACCATGCTCTATGGAACATGCTGGAGTATTGTATTACAGCTGTGAAGAGGTGTGCGATAAATTACTTAAGTGTGGCAACCACAAATGCACAAGTATCTGTCATCCCGGAGACTGTCCTCCTTGTGTGAGAGCTATTGATTATGCAAAGACTTGCCCATGTGGTAAAACTCAACTCACTGAAGAAAGAAAGTCATGTTTGGATCCTATACCTTGCTGCGATGAGATCTGTGGTAAAAGATACACATGCGGACCAACATCTACTCCTCACACATGTCAAAGCACTTGTCATGAGGGTGATTGCCCAGTGTGTCCATTAACCAGTCAGGTTTTATGCCGATGCGGATATATGAGCAAGGAGATACCATGTTCTGAACTCACTTCTAGATCTGATGATGCACGCTGTCAAAAGAAATGTACCAAAaaaCGCTCTTGTGCTAAACATAAATGTAATCAGTTTTGCTGTATCGATGTTGATCATATATGTCCGTTGCCCTGTAACCGTACATTATCATGTGGACAACATCGTTGCGAACAAACCTGTCATAATGGAAGATGTATGCCATGTTGGAGAACAACTCATAATACACACGACATTCTTCATATCCCACCAAATAGAGAGCATTGTGACCGTGGATGTTTCGCTTTAGTGTTGACGTTGATGGTTGACCAGGATCAACCACGCTTTCTTGCGTTTCGGGTTGTCGAAATAGATCAAGCTTTTATTATGCTTCAAGATACTCTTCTTTTTATGCCTTGCAAGCAAAGAAATCGAGATGTTTAA
- Protein Sequence
- MAQWNPYYGAPSNSVFEEQNLESQVFNPSVPYGAIPYQTVNYNNYYVPNVTNYRPNLPSNIRTAQDIEAEQFSQYMNQIPTQHVVQSQYLPDRSTQSPVYSTLTPTAAEFKPSTSYAPIVSQTFSNNNYKNIESDKKIEVKSESEPSTSKINEGESPKPDIFSKPNKQSYKTDNDRYKHDNRMKDSARYRENKDNGRYREDYKKSDAIRSDNSGNFERYKQGERDKDKHERYRQGNQEKDDRYKQNRDNNDRNRQNNDRYRQGDNKYYRNRPDGEQNDRFRQGSTDKDNLDNKSNATTSQDTENKEMSNRYQQNRGKGNDRYNRNIEKENLNKGRYDNRVKSGNTQDRGNRVSNRYQERTSNSNRQSSSEKDINKDRFDRAGSSKSETNIENKRDNRETVYQSTDVDGMNRNSSTEKDNQDSDNASTSKAQDNRDNKYHQNRENRYKENYSGRYRQDNRENKNDRYSQDRDWRDNRDNRSYRNNYNKNYRDQDSYQREYYGSRNNRYSKNNGEGGQNRSYEYERSNSDGYKGSNSKNSYRDNQKEEVKYENWRSNMPSIRKEKIVKEGRKGDYQKPSSSKTGLKPVKNEADISQRERLIEQVNKGTLECLVCYEFVRHVDKVWSCQKCYHVFHLRCCLKWAKTSQDEKGWRCPACQHVYMNLPQSYSCYCGKSMDPVYRPGDTAHSCGNVCGRPGIKPGCPHTCRLLCHPGPCPVCEDLISKSCSCGATKQIVKCSASIPLVCKAICSKTLNCGVHICQKTCHPSECDVCPETIDQECFCGKAKRNIPCSMEHAGVLYYSCEEVCDKLLKCGNHKCTSICHPGDCPPCVRAIDYAKTCPCGKTQLTEERKSCLDPIPCCDEICGKRYTCGPTSTPHTCQSTCHEGDCPVCPLTSQVLCRCGYMSKEIPCSELTSRSDDARCQKKCTKKRSCAKHKCNQFCCIDVDHICPLPCNRTLSCGQHRCEQTCHNGRCMPCWRTTHNTHDILHIPPNREHCDRGCFALVLTLMVDQDQPRFLAFRVVEIDQAFIMLQDTLLFMPCKQRNRDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -