Basic Information

Insect: Liopterus haemorrhoidalis
Gene Symbol: znf423
Assembly: GCA_963971575.1
Location: OZ020614.1:62154284-62179634[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.00025 0.059 15.7 0.8 3 23 128 148 126 148 0.97

2 19 0.72 1.7e+02 4.8 5.8 1 23 154 176 154 176 0.97

3 19 1.4e-05 0.0034 19.6 3.6 1 23 182 204 182 204 0.99

4 19 1.9e-05 0.0046 19.2 0.3 1 23 210 232 210 232 0.98

5 19 0.00025 0.061 15.7 4.0 1 23 266 289 266 289 0.96

6 19 0.061 15 8.2 0.9 1 23 385 408 385 408 0.93

7 19 0.14 35 7.0 2.3 1 23 420 443 420 443 0.96

8 19 0.093 22 7.6 0.3 3 23 492 512 491 512 0.98

9 19 0.001 0.25 13.8 0.7 1 23 533 555 533 555 0.97

10 19 0.00051 0.12 14.7 3.2 1 23 563 586 563 586 0.94

11 19 0.064 15 8.1 0.1 1 23 591 614 591 614 0.92

12 19 0.0097 2.3 10.7 0.7 1 23 686 709 686 709 0.96

13 19 0.091 22 7.6 5.4 2 23 796 817 795 817 0.95

14 19 0.0098 2.3 10.7 0.7 1 23 827 849 827 849 0.98

15 19 0.1 24 7.5 3.5 3 23 858 878 857 878 0.96

16 19 9.8 2.4e+03 1.2 1.3 1 13 963 975 963 977 0.88

17 19 0.02 4.8 9.7 2.2 1 23 1000 1022 1000 1022 0.96

18 19 0.0099 2.4 10.7 0.1 1 23 1030 1052 1030 1052 0.97

19 19 0.039 9.4 8.8 0.7 1 23 1059 1081 1059 1081 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.00025	0.059	15.7	0.8	3	23	128	148	126	148	0.97
2	19	0.72	1.7e+02	4.8	5.8	1	23	154	176	154	176	0.97
3	19	1.4e-05	0.0034	19.6	3.6	1	23	182	204	182	204	0.99
4	19	1.9e-05	0.0046	19.2	0.3	1	23	210	232	210	232	0.98
5	19	0.00025	0.061	15.7	4.0	1	23	266	289	266	289	0.96
6	19	0.061	15	8.2	0.9	1	23	385	408	385	408	0.93
7	19	0.14	35	7.0	2.3	1	23	420	443	420	443	0.96
8	19	0.093	22	7.6	0.3	3	23	492	512	491	512	0.98
9	19	0.001	0.25	13.8	0.7	1	23	533	555	533	555	0.97
10	19	0.00051	0.12	14.7	3.2	1	23	563	586	563	586	0.94
11	19	0.064	15	8.1	0.1	1	23	591	614	591	614	0.92
12	19	0.0097	2.3	10.7	0.7	1	23	686	709	686	709	0.96
13	19	0.091	22	7.6	5.4	2	23	796	817	795	817	0.95
14	19	0.0098	2.3	10.7	0.7	1	23	827	849	827	849	0.98
15	19	0.1	24	7.5	3.5	3	23	858	878	857	878	0.96
16	19	9.8	2.4e+03	1.2	1.3	1	13	963	975	963	977	0.88
17	19	0.02	4.8	9.7	2.2	1	23	1000	1022	1000	1022	0.96
18	19	0.0099	2.4	10.7	0.1	1	23	1030	1052	1030	1052	0.97
19	19	0.039	9.4	8.8	0.7	1	23	1059	1081	1059	1081	0.93

Sequence Information

Coding Sequence: ATGACACGGTTCATAATTAATAACACATTTGTTTCAGCTGAAGTTGATACCGATAGCTGCGATGAAAATATTTCTTCCAATATTTCACCGTATGAAGCAACATTGTTGGATAATCAGGATGCCTCGGTTGGAGACTTGGCAGAAATAGATTACTCCTCACCACTTTCTCAGAACAATCTCCTGGTTCGCCTTGACACGAATGATAGCCTAGAATCTGATGACCTAGGTACCGATCAAGAAACCAGTTGGTTTTCAGCAACACCTGAAAACTCTCAAGCATCACCCGTCCCTTCATCTTGTGCCACACCAAATTCTATCAGCGATTTACCAGACGCAGAATTAAGTTTTACAGTGGGTATTACTGAGAATACTCAATATGGTTGCTCCTTCTGTAACAAGGCGTTCCCAAGGCTCAGTTTTCTTAAGAAACATGAACAAATACATAGTGATCAAATGCCATTTAGATGTGAGTTTTGTTCGAGGTTATTTAAGCATAAGAGATCAAGAGATAGACATGTTAAACTCCATACTGGAGATAAGAAATATAGATGTCTCCACTGTGTAGCAGCGTTTTCAAGAAGtgATCATCTAAAAATCCATATGAAAACTCACGATACGGAAAAGCCATTTAAGTGCAAAATTTGCAACCGTGGTTATAATAcagctgcagctcttacttcACATATTCAAAATCACAAGAAACAGAAACTTGAGAGCTGTTCTGGTTCTGGCAGTACAGGACAGGAAAGCAGTACTGCCAACACTAGTGATGAACATACTTCTAGTCCTGAAAATTTTCCATGCAAACACTGTGGAGAATGCTTCCAAAATATGGATTATCTTCAGaATCATTTGTCTTCAAACCATCTATCCGATTTTACAGACAGAACAAATAAGCTAGTATCAACcttcttaaatttatcagatCCTACTGTACCGGAAATACCCcaaataacaacaaaactagCTTGCATCTACTGTACTAAAGACATCTTCAACACAATGGAGCAACTACAAACACATGTACAACTAATGCACCGTTCGATATTAAATGGTGAAATGTGTGACTACACTTTCAatgacattaataaaaaatattcacctCACAATAAAGTACAAACAAGATCTCAAAATTGTTCCGTTCATGAAAATTACTCCTGTGATATATGTAACATTCAATTTAATTCTGTACAAAGGTTGCATAAACATAACCTAATTGTGCACAGAAACTACTTGGATTCATTGAATAAACCTAATTATATGTGCATGAAATGCACAGTACCATTCCAAAGCTCTCATATGTTCACCGAACACTATTTAAGGGTGCATGAGAACAGTTTAAACGACTTATTTCTAATGTCACCCGTTTTGGAACaggatttaaataaatttaataatagaaaAGCAAAGAGACAGTGTATAGAAGGGGTGGACGTGAAGGTTAATCAATACGAACACACTGGAACACTTCTTTGCAACCAATGTGATGCAGCACTTCCTAATTTTGAATCATTCCGTTCACATCTAAAATCTCACCTAGAACAAACCGTCAGTCAAAATGATACCAACATTATATTTGATGAGAAAGTGAATAGTTACTCCTGTCCACATTGTACAGTTAGTTTTAAGGAGTTGGATGATTATGAACAACATGCTTTAAGCCATTTCTTAGCAACAACTGTTGAATATGAATGCAAATGTTGTACAAAATCGTTTTCGACTTCTGATGAATTACAGACGCATCTAATGGATAGGCATGCTGATCATATATACAGATGTGCTTTATGCAAAGAAATGTTTGATTCAAAAGTAGCAATACAAgtccATTTTGCAGTAAAACATAGTActggaagtaaattttatagaTGTGTAGCATGTCCTTACGAGtctgtattatttaattctaaATTAGAATTTTCAATTCACGTACGGACAACGCACGGGAATCAAAATCCAGTTGTTACGAACAATAAGTCCATACGATGCATGTTTTGCCGACAAAGATTCAATACTGATATTGAGATGCAGTTCCATTTGACGTCACACAGTAAACAGTTTCATTGTCCAATATGTccagaaaaatttcaaattgaaTTCTTATTGGATAGACATATGGAGATGTTTCATTCTAACTCGCAAaTTATTAATAAGACTGTGAGTATGGATGAAAAGTCGAACAAGAGTGACATCTCCAGTAATACACCAGCACTGCATTCTCCTCCAACACCTAAGCTAGCAAAAACAAACAATGAGAATAACAACGTTAAAAAAGCTTTTGATATATTCGACTGTGAGGTGTATGAAAGAACAGATTTTCCAAACGAAGACAATCACAGCAACAACAACCAAATAAAGAAGCAACCAAAGCACAGCAACGTTAGCCTCCATTGCGCTTACTGTGGTGAAACTTGTAAATCAAGAACCGATATAGAAAACCACTTAAAACATCATTCACAAGGTGGAGGTTCTCTCGGAAAATATAAGTGCAATATATGTGATGAATTGTGTAGTTCTGCTATCTTCCTCGCCGAACATAAACTAACCCATTGCAAAATAGTCTCGGGCAATAACTGTACACATTGTAAAACAACATTAACAAATAAggaacaattttatttacaccTCATACAACAtagtaataacaataataatcaaGCTTATAAATCACAGGTTGTTCTGCCAACACCATGTGTTATTTGCAGACAAACACTTATGTCAGATGTGGAAGTAAAAATCCACTCACAATACCATCTTAACAATACTCTACAACAATACGAATGTTCAATATGTTTAAAACTAactgaaaacaaaaacataatcgtttctaatacaaataattatgtTTGTAAAGATTGTTATTCAAGCACTGGGTTATTGGATTTTACTTTTCGTTGTTCTTCTTGTGGTATAGTGTGCAGTAAAAAACTCTCGAACGATTCTAAAATATGTGTAAAGTGTCAAAATATGGATAGTGAGAAAGATAATACAGACAACACTCACGAGTGCCATCTATGTAGAAGACTGTTTTCTAAACCCTTAGAACTCCAATCACATCTAATAGAACACACCTTTGCAGGTTGTGGTAGTTATACTTGTTACTTATGCTCAGCAGTTTTTACAGCAGCACAAGGATTACAAAACCATATTTTAGAACACGGACTTGGAGCCCGACCTTATGATTGtccaaaatgtaatataaaattcTTCTTCCGCGCTGAATTAGATAAccataattatatacatttaaatgaaaatgataatataaatgaagatgaaaaattcaattttttgaatCAAGAAGAATGTGTCAGTCCTGAAATTGAACAAAAAGTGAATTGTAAAGACTTAaattttactgaaaattttagggaggacatatttattaaacaggaaccagaagaaaataatgaaaatttagaaaatggagaataa
Protein Sequence: MTRFIINNTFVSAEVDTDSCDENISSNISPYEATLLDNQDASVGDLAEIDYSSPLSQNNLLVRLDTNDSLESDDLGTDQETSWFSATPENSQASPVPSSCATPNSISDLPDAELSFTVGITENTQYGCSFCNKAFPRLSFLKKHEQIHSDQMPFRCEFCSRLFKHKRSRDRHVKLHTGDKKYRCLHCVAAFSRSDHLKIHMKTHDTEKPFKCKICNRGYNTAAALTSHIQNHKKQKLESCSGSGSTGQESSTANTSDEHTSSPENFPCKHCGECFQNMDYLQNHLSSNHLSDFTDRTNKLVSTFLNLSDPTVPEIPQITTKLACIYCTKDIFNTMEQLQTHVQLMHRSILNGEMCDYTFNDINKKYSPHNKVQTRSQNCSVHENYSCDICNIQFNSVQRLHKHNLIVHRNYLDSLNKPNYMCMKCTVPFQSSHMFTEHYLRVHENSLNDLFLMSPVLEQDLNKFNNRKAKRQCIEGVDVKVNQYEHTGTLLCNQCDAALPNFESFRSHLKSHLEQTVSQNDTNIIFDEKVNSYSCPHCTVSFKELDDYEQHALSHFLATTVEYECKCCTKSFSTSDELQTHLMDRHADHIYRCALCKEMFDSKVAIQVHFAVKHSTGSKFYRCVACPYESVLFNSKLEFSIHVRTTHGNQNPVVTNNKSIRCMFCRQRFNTDIEMQFHLTSHSKQFHCPICPEKFQIEFLLDRHMEMFHSNSQIINKTVSMDEKSNKSDISSNTPALHSPPTPKLAKTNNENNNVKKAFDIFDCEVYERTDFPNEDNHSNNNQIKKQPKHSNVSLHCAYCGETCKSRTDIENHLKHHSQGGGSLGKYKCNICDELCSSAIFLAEHKLTHCKIVSGNNCTHCKTTLTNKEQFYLHLIQHSNNNNNQAYKSQVVLPTPCVICRQTLMSDVEVKIHSQYHLNNTLQQYECSICLKLTENKNIIVSNTNNYVCKDCYSSTGLLDFTFRCSSCGIVCSKKLSNDSKICVKCQNMDSEKDNTDNTHECHLCRRLFSKPLELQSHLIEHTFAGCGSYTCYLCSAVFTAAQGLQNHILEHGLGARPYDCPKCNIKFFFRAELDNHNYIHLNENDNINEDEKFNFLNQEECVSPEIEQKVNCKDLNFTENFREDIFIKQEPEENNENLENGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -