Basic Information

Insect: Liopterus haemorrhoidalis
Gene Symbol: -
Assembly: GCA_963971575.1
Location: OZ020617.1:3089700-3133363[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.64 1.6e+02 5.0 0.1 2 23 383 405 382 405 0.93

2 17 0.025 5.9 9.4 2.4 1 22 416 437 416 437 0.95

3 17 0.79 1.9e+02 4.7 2.6 2 23 447 468 446 468 0.87

4 17 2 4.7e+02 3.4 0.9 2 23 476 498 475 498 0.91

5 17 4.9e-05 0.012 17.9 3.1 1 23 504 526 504 526 0.98

6 17 0.071 17 8.0 0.8 1 23 532 554 532 554 0.94

7 17 0.0011 0.26 13.7 5.3 1 23 560 582 560 582 0.98

8 17 0.58 1.4e+02 5.1 0.7 1 15 592 606 592 610 0.86

9 17 6.3e-05 0.015 17.6 2.0 1 23 631 653 631 653 0.94

10 17 0.00024 0.057 15.8 2.4 1 23 699 722 699 722 0.93

11 17 0.0098 2.4 10.7 0.8 1 23 729 752 729 752 0.97

12 17 0.0059 1.4 11.4 1.4 2 20 758 776 757 780 0.88

13 17 1.1e-06 0.00026 23.1 0.6 1 23 788 810 788 810 0.99

14 17 6.8e-05 0.016 17.5 6.4 1 23 816 839 816 839 0.96

15 17 0.00012 0.03 16.7 1.0 2 23 850 871 850 871 0.96

16 17 0.00015 0.036 16.4 0.8 1 23 876 898 876 898 0.97

17 17 4.4e-06 0.0011 21.2 0.3 1 23 903 925 903 925 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.64	1.6e+02	5.0	0.1	2	23	383	405	382	405	0.93
2	17	0.025	5.9	9.4	2.4	1	22	416	437	416	437	0.95
3	17	0.79	1.9e+02	4.7	2.6	2	23	447	468	446	468	0.87
4	17	2	4.7e+02	3.4	0.9	2	23	476	498	475	498	0.91
5	17	4.9e-05	0.012	17.9	3.1	1	23	504	526	504	526	0.98
6	17	0.071	17	8.0	0.8	1	23	532	554	532	554	0.94
7	17	0.0011	0.26	13.7	5.3	1	23	560	582	560	582	0.98
8	17	0.58	1.4e+02	5.1	0.7	1	15	592	606	592	610	0.86
9	17	6.3e-05	0.015	17.6	2.0	1	23	631	653	631	653	0.94
10	17	0.00024	0.057	15.8	2.4	1	23	699	722	699	722	0.93
11	17	0.0098	2.4	10.7	0.8	1	23	729	752	729	752	0.97
12	17	0.0059	1.4	11.4	1.4	2	20	758	776	757	780	0.88
13	17	1.1e-06	0.00026	23.1	0.6	1	23	788	810	788	810	0.99
14	17	6.8e-05	0.016	17.5	6.4	1	23	816	839	816	839	0.96
15	17	0.00012	0.03	16.7	1.0	2	23	850	871	850	871	0.96
16	17	0.00015	0.036	16.4	0.8	1	23	876	898	876	898	0.97
17	17	4.4e-06	0.0011	21.2	0.3	1	23	903	925	903	925	0.98

Sequence Information

Coding Sequence: ATGAAAGTACAGATACGAGTTATTTTACCACAcggtattatattattaataccaGTTTACGATGATGAAACTTTTAAAGAATTTCAAGAAAGGGTGGACGATGAATATGACTTGTTTTTAGAAAAAGCATATTTTAAGTTTGAAAATCATGAAATTCAAGACAAGGATATCTtatctaaatttataaattcCTATAACTCTGCTAGTACAGatgAACATACTGATACAATACTTTATGAAATATCACTAGAAAATTCAGATGAAAATGcaatttttgatattaaaaatgaagGTGATACATCAAGTGAAAATATTGAACAAGAAGAAAATTACATGTCGTTAAAAGAAGTAGAAAATCTTCCACCGCTTATAAATTTAACAGAGACCGTAACAGAAAATAATAGTGTTATAAACGTACTAAATGAACCGATATTCGACAATATTACATACGAAATAGTAGATACAGATAACGAGATAAACGTAAAAGATCTACAGTCTAATAAtacagaaataaatgaaattgaatTGACAGAAAACAATGCGAAAGAAAGTACAGAAAGTTTAATTTCTTCCGATTTAATGATTATAgataatgaaaatgaaaaatcaacagaaaatgaaaatatttatcgATACATCGATATAGAATCCAAACTTCGTGAAATTCATGACACTGTTGAAGAATCagtaactgatttttgtagACTTTGTGCGAAAACTATTAATGTAGAAGATAAAAATCTTATTTATGGTGAAGATGATCGATTTGATGAGAAAATAAACAACTGTTTACCGATTAAAGTTGATGTTAAAGATGGATTACCACAACAATTGTGCGGACATTGTTTAgaacaacttaaaaatatttccgAATTTGTTCAAACTGTTTTAGAATCGGATAAGGTTCTACGACTGAAATTTATATCTACTGGTTCCgaagttaataataaatcaaacaaATTATCAGAAAACGTAAAATTCGAATCTGAAATGACAGATTTAGAATACCTAGATAtttcaaatgaagaaaatgtAGCTGAAAACTATCCAGAATTAAAATGTCGCTTTTGCGATATTCTTTTAAACGATACAAACATGTGCGTTGACCATAGCATTAAAGTACATACAAGCAAAAgtggtctgtgtgtctgtgtactCTGCGATCTTGGATATACAACACCAGAAATATTAAAAGAACACATTAtaataaaacatcaaaaacaattTGAGAATAGGTCAAGGAATTTTCAATGTAAAGTATGTTTACGGAGATATACTACagaaatattgctacaaaaacaTACTTGTACGAAGGGAATTGCGGGTAAAGTGTCTTTACATTGTGAAGTTTGTAACGAGACATTTTCTTCGAAAATAAGATTAAATTTCCACCGACAATTCCATCTTAAAAATGCAAGACCGTTATATTGTTTTCAATGTCGTATTAATTTTAACGACGAGAATCAATATTTTGAtcatgttaattttttacacgaatctaaacaaatatttgtttgtaatatatgcgataaaacttttaatttacGTTCATCATTTAATAATCACAAGAAAAAACATCTTAGTGATCGAAGATATAAATGTGAGActtgtaataaattatttttaaataaacaaacactTCAAGAACATGAAGTTATTCATATGTCAACGAAACCACATCAGTGTCATCTTTGTGGTGAAAAATATAATCGTATGAGTAGATTACGGAAACATTTATTAACGCATGATTCAGATCCTGTTCTTAACGATGTATTTATTTGTACGATTTGTCAAGAATGTTTTGCGAATGAAGAAAATGGAAAAGAACACTGTGGAAATGATCATTGTAATGATATGAATTGTATCGAAGTTGTTAGTATGGATAGAGTGTTCCGATGTGAATTTTGTGAGAAGTGTTTTAGTACGCCGGATTCTTTGAATATACATCGGGTAGAACATAATGGAAACTTGCCTTATACTTGTCATATTTGCAAAGCACAGTTTGCTAGCTTTGCTAGATGTACATCACATAAAACAACTCATGGAATATTTAAAGATGATGGTGAAAAGGACAATTTTCCAGTTGTCAAGCATTTCTTATGTGATAAATGTGGAAAATCTTATGTTCACTGGAGTTACCTGAgTTTACATCGAAAGTTAAAGCATGcagaaaatatgaaaacttATAAATGTCCTCATTGTTACAAAGAATTTTTGAATGTAGCGGGCTTGAATTATCATATTAAATCTGCCCATGCCGGTGCATCCTGCAAATGTGATCACTGCGGGAAattatttgcaaatccaaaaaCTTTATTGTTACACAGCGCTGCAGCCCACTCcgataaaatggaaaaaaATTTCAAATGTGAGAAATGTGATAAAGTATTCTCGTACCAAGTTGGTTTGGACGCTCATATGAAAACCCACAGTAATACAAAAGAACATAAATGTCCAAAATGTTCTAAAAGTTTTTCTTACGCAACAAGTTTAACAAACCACATGAAACAATGTCACGAAGATCATTCTCCGAACCAGTTACGTAACACTTGTATGTTTTGCGGTAAAAAATTCAACACAAAATCCGAATATGAAGCTCATCAACTATTACATAAAAAAGGAAAATTCAATTGTGATATTTGTGACAAAAATTTCGAAAGTAAAAACTTATTATTAACGCACAATAGAATACATATGCATCGACCGTTTGTTTGTGATATCTGCGGATTGGGTTTTAGGAAACCGTACAGTTTAAAAACTCATATTAATAGACACGTTAAATCGAAAAACAGTGGAAGTTTTGTTTTAATGGTTGATATGAAAGAAGATCAAATTGAAACACAAGAAAAATCACAAGAAACTATTAACGCTGAACAATCGATTCTAGAAAATCAATTTACCGACAGTTCCGTTCAACTAAACTTAAACTCGTTATCGGAAAATTATATTGATATGGGTAATGGAAACTATTTGCAAATTCAAGGTAATACAGTGAATATCGATGGAACGGACTACATTTTATTGCCTGGCGATGGTAAATCTGCAGATTCTAATGAAGTACAGATGGTTGTCGATGATAATTATACGGAAAATCAACTTCCGGTAGTGACTAATTTGGATAATAGTGTTGTTTTAGTTGACAGTGATAACCAGATTATTTTGAATGAAAATCAAGGTAGCACATTAAGCATAAATATCCTGATATTGCCTACAGCAGCAGAAAACATTCCAGTAAATATATTCGATGATTCAGATTATAATCCtgatctagaaaaaaatattaatgttgatataaaaaataaagtcgTTCTACCAGAAGATATTCTGGATGAAGCAAATGATGAATCTAGTCTTATAGATATCCAGGAAGTAGAAAATGTAAATGATGAAACTAATTCACAAATTAAAGTAAACAACATCTTTGCTCCAATATACGATAGCAACAATGAAGATGATGATTATGCTGATACAGATGATGATGTTAAATTATCAAATGATACTCTTCTGCTAATGGACGATATCAACATTAAAACCACCACACAAAATACTGAAGATGATGATTATGCTGACAAAGATGATGATGTTAAATTATCCAAAGATACTCTTTTGCTAATGGACGATATCAACATTAAAACCACCACACAAAATACTGAAGATGATGATTATGCTGACAAAGATGATGATGTTAAATTATCCAAAGATACTCTTTTGCTAATGGACGATATCAACATTAAAACCACCACACAAAATACTGAAGACGATGATTATGCTGACAAAGATGATGATGTTAAATTATCCAATGATACTCTTTTGCTAATGGACGATACCAACATTGAAACCACCACACAAAATACTGAAGATGACGATTATGCTGACAAAGATGATGATGTTAAATTATCCGATGATACTCTTCTGCTAATAGACGATATCAACATTAAAACCACCACACAAAATACTGAAGATGATGATTATGCTGACAAAGATGATGATGTTAAATTATCAAATGATACTTTTGTGCTAATGGACGATACCAACATTGAAATAACTAcacaaaatactaaaaatattgaTGCTAAAAGAGATGATGCTTTTAAAATAGCAAACGATACATTTGCCCAAAAAGGTCACAATATTGAAACAGAAAATGCAGTAGTTCAGTCAACTAATGAAATAGACGATAAACGATTTGAAGATAATGCTAATAATGAAGATGATATTATTCTTGCTGTAGATTCTAATTacgaaacaaataaaaattctattgctGAAAATAGTGATAATACTGAAAATAATGATGATTCTTCTGCTTTATTAGataagattaaaattaaaactgctGCAAAAAGTGCAGTAGATGATTCTATCTATGATGAAAATGAGGCAGTACTAGGTGATAAATTTGTTCTAATAGACGATATCAATATTGAAACTACTTCAGAAATCGTAATTGATGATTCTACAGATGAAATAGATGATGATACTACTGCTGAAGATGATAGAAATGATTTTGAAATGGACGATATCTTTGGTGTAATAAATGATTCCTTTGAAACTACTTCAGAAAGTGCAGTAGATGATTCTACAAATAAAGATGATGATACTTTTGGTCTAATCGATGAATATAGTTCAGAAAATACAGATGAAGAGTCTACTACAGAAGAGGATGATAATGCTGATTATAATGATATTCCTGGAGTAGATTATTCAACTAATGAATCAATCGCAAAAGATTTCGATGCTGAAATATATAATAAGCCTGAAGAAATAGATAAGTATCCCATAATAGGTGATTTCAGTATTAAACCTAATTTAATAGTTGAAATTAATGGTAATTATGATGATTATGAGTATTCtaaagcgaTAACATGCTACAATTGTTGGCCCTGTAATCCAGTTGATAAATATGATAATACTTGTGAAGCAAAATATGCCTGTGTAGCAATAAAAACACCTAAAGGTGTTCGACGAGAATGTATTTCTGATGTTGTAATTGCTCGTCAAATGAAAGAATACTGCGAATCATCATACGGTAGAAGTACAGAATGTGACATTTGTAATGACAGAGAAAAATGCAACGATGCACCGATGagaacTTATTTTTCCGACCACAACCACGAAGACACCAGACCAGTTTATTTTTCCGGTGACACCAGTCCAGTTTATTTTTCCGGAGACACCAGATCAGTTTATTTTTCCGGAGACACCAGACCAGCTTATAAGTATATTTGCTATAACTGCGAAAATTGTGATTTTATAATACCTAACACAACGTGTGGTTCAAACGAAGGTTGTCTTAAAACAATACAATCCGGAATGATTAAAAGATCTTGCCTCAGAAGACCTTTTGAAGTAGAAGATAATTCCTGCGTACGCAATGGGGTACGGTACTATACATGTCAAGATGTAAGATCTGAAAACAATTCACCTCCAGAGAATGATGAGAATACCCGATGGCCTCTGGAAGATATATCGGTGATCAGTTTTGGAACAAATACTGATGTCGATGAATATGAAATCGATGGAACTGAATTTACCAATAGTACTGAAACTGATTCTGTACAAGATATACAAGAGACTTGTAATATCGaacaaaagttatttgaaaactCAACCGATGAAATTGATATTGTTACGGATGAAATGGTGATAGATTATATCCCTAACGACCAACCAAGTACTAGTCAAGAAGAAGAAAATCAGCATACAAATAAAAGAATCTACAAAAAGCAGAAAagacgaAATACCACAACTCAAAAAAGAAATTACCCAAATGCTGCGCATCCAAgtgtacaaaaaatatttatggataataaaaaaatgttgataccTAGAAAATATTGGAAGTATGATTTCCATCCAGTTGTTGACATTAACATTGAACCAAAACCATGGCCAAGAAGTTCTGATAATCTTCAAATTGGAAAAACTAACATACCAATTCCAAAAACACTATCGATAAATCTACCACAAGATATTAAAAATGAAGGAAAATTTGAAGAGGAGGCATCCttagttacaaaattaaaaagaaatcatAAGAAACCACAATGTAATAGGTTACAGTTTTCGAATTTGCGAGTTATTACCCCACAGAATTCAAAGGCCAGTGATGAGGGTGCCACTTGTGCCACTGAATTAGCCTGGTTTCTTTCGAGGTTATCACTTCTTGTTAAAATGCTCCCGTTATTTGTCCCAGACGACGGAGGTTCACCTCTCGCCATTGTCTCCGTTAACTACAACTGCATTCCCCGGGAATTACAACGAAGGTGTGGGGAGGATTTCTTGACAGTGATACGATGGTTACCTGGTGACCAGATGGGGTCTGGTGTAGATGAGCTAACTGGTACACCACAAGTAGGTCGCATGTATCGATATGTAGTCCGATTACGTTCAAGCTCTTCTATTCGGTCTAGATCCTAA
Protein Sequence: MKVQIRVILPHGIILLIPVYDDETFKEFQERVDDEYDLFLEKAYFKFENHEIQDKDILSKFINSYNSASTDEHTDTILYEISLENSDENAIFDIKNEGDTSSENIEQEENYMSLKEVENLPPLINLTETVTENNSVINVLNEPIFDNITYEIVDTDNEINVKDLQSNNTEINEIELTENNAKESTESLISSDLMIIDNENEKSTENENIYRYIDIESKLREIHDTVEESVTDFCRLCAKTINVEDKNLIYGEDDRFDEKINNCLPIKVDVKDGLPQQLCGHCLEQLKNISEFVQTVLESDKVLRLKFISTGSEVNNKSNKLSENVKFESEMTDLEYLDISNEENVAENYPELKCRFCDILLNDTNMCVDHSIKVHTSKSGLCVCVLCDLGYTTPEILKEHIIIKHQKQFENRSRNFQCKVCLRRYTTEILLQKHTCTKGIAGKVSLHCEVCNETFSSKIRLNFHRQFHLKNARPLYCFQCRINFNDENQYFDHVNFLHESKQIFVCNICDKTFNLRSSFNNHKKKHLSDRRYKCETCNKLFLNKQTLQEHEVIHMSTKPHQCHLCGEKYNRMSRLRKHLLTHDSDPVLNDVFICTICQECFANEENGKEHCGNDHCNDMNCIEVVSMDRVFRCEFCEKCFSTPDSLNIHRVEHNGNLPYTCHICKAQFASFARCTSHKTTHGIFKDDGEKDNFPVVKHFLCDKCGKSYVHWSYLSLHRKLKHAENMKTYKCPHCYKEFLNVAGLNYHIKSAHAGASCKCDHCGKLFANPKTLLLHSAAAHSDKMEKNFKCEKCDKVFSYQVGLDAHMKTHSNTKEHKCPKCSKSFSYATSLTNHMKQCHEDHSPNQLRNTCMFCGKKFNTKSEYEAHQLLHKKGKFNCDICDKNFESKNLLLTHNRIHMHRPFVCDICGLGFRKPYSLKTHINRHVKSKNSGSFVLMVDMKEDQIETQEKSQETINAEQSILENQFTDSSVQLNLNSLSENYIDMGNGNYLQIQGNTVNIDGTDYILLPGDGKSADSNEVQMVVDDNYTENQLPVVTNLDNSVVLVDSDNQIILNENQGSTLSINILILPTAAENIPVNIFDDSDYNPDLEKNINVDIKNKVVLPEDILDEANDESSLIDIQEVENVNDETNSQIKVNNIFAPIYDSNNEDDDYADTDDDVKLSNDTLLLMDDINIKTTTQNTEDDDYADKDDDVKLSKDTLLLMDDINIKTTTQNTEDDDYADKDDDVKLSKDTLLLMDDINIKTTTQNTEDDDYADKDDDVKLSNDTLLLMDDTNIETTTQNTEDDDYADKDDDVKLSDDTLLLIDDINIKTTTQNTEDDDYADKDDDVKLSNDTFVLMDDTNIEITTQNTKNIDAKRDDAFKIANDTFAQKGHNIETENAVVQSTNEIDDKRFEDNANNEDDIILAVDSNYETNKNSIAENSDNTENNDDSSALLDKIKIKTAAKSAVDDSIYDENEAVLGDKFVLIDDINIETTSEIVIDDSTDEIDDDTTAEDDRNDFEMDDIFGVINDSFETTSESAVDDSTNKDDDTFGLIDEYSSENTDEESTTEEDDNADYNDIPGVDYSTNESIAKDFDAEIYNKPEEIDKYPIIGDFSIKPNLIVEINGNYDDYEYSKAITCYNCWPCNPVDKYDNTCEAKYACVAIKTPKGVRRECISDVVIARQMKEYCESSYGRSTECDICNDREKCNDAPMRTYFSDHNHEDTRPVYFSGDTSPVYFSGDTRSVYFSGDTRPAYKYICYNCENCDFIIPNTTCGSNEGCLKTIQSGMIKRSCLRRPFEVEDNSCVRNGVRYYTCQDVRSENNSPPENDENTRWPLEDISVISFGTNTDVDEYEIDGTEFTNSTETDSVQDIQETCNIEQKLFENSTDEIDIVTDEMVIDYIPNDQPSTSQEEENQHTNKRIYKKQKRRNTTTQKRNYPNAAHPSVQKIFMDNKKMLIPRKYWKYDFHPVVDINIEPKPWPRSSDNLQIGKTNIPIPKTLSINLPQDIKNEGKFEEEASLVTKLKRNHKKPQCNRLQFSNLRVITPQNSKASDEGATCATELAWFLSRLSLLVKMLPLFVPDDGGSPLAIVSVNYNCIPRELQRRCGEDFLTVIRWLPGDQMGSGVDELTGTPQVGRMYRYVVRLRSSSSIRSRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -