Basic Information

Insect: Liopterus haemorrhoidalis
Gene Symbol: gl
Assembly: GCA_963971575.1
Location: OZ020625.1:29838323-29848375[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 7.8e-06 0.028 16.4 0.1 18 41 309 329 296 331 0.84

2 5 0.098 3.4e+02 3.2 0.3 18 41 337 357 332 359 0.83

3 5 0.0052 18 7.3 0.8 6 38 354 386 349 386 0.80

4 5 0.00029 1 11.3 0.8 18 40 393 412 389 415 0.89

5 5 0.36 1.3e+03 1.4 1.2 18 40 421 440 413 442 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	7.8e-06	0.028	16.4	0.1	18	41	309	329	296	331	0.84
2	5	0.098	3.4e+02	3.2	0.3	18	41	337	357	332	359	0.83
3	5	0.0052	18	7.3	0.8	6	38	354	386	349	386	0.80
4	5	0.00029	1	11.3	0.8	18	40	393	412	389	415	0.89
5	5	0.36	1.3e+03	1.4	1.2	18	40	421	440	413	442	0.82

Sequence Information

Coding Sequence: ATGGACGGTTGCTACGTGCCCAACAACCCCCAGTACGGCCTCCAGCTAGAGTGCCAGTGGCCAAATTCACAGCCACAACAGATTCACTGCAACGgCAATGGTAATGGGGACCCGCTGTCTTTGAGCCTGTCTCCCCCGGCTGGGTGTTGGGGCACCCCAGCTCCACCCCCTGGAGATGACATGGGCTCTTTCTCCATGCCTCTAGACCTAGATCCACTACCGACACTCTTTCCATTTTCGCCCTGCACCAACAACTACAAaaCAGAATCAAATTGTGGTCCAATTTTGCACAAAACCGAAATAAAACCTACCCATGATATGGCTGATGTACTTCTATCTCTTAAACACGCTGTGGTACACCCTGGACAAGGAGGAAATGGCCCTAGTAGCCCAGGATACGTCACCGGATATGGCACCCAACAACCACAACTAACATACACAGTACATCCGCATCAGATGTTGATGTCACCAACTTCAGGTTACGCTTCTGGTTTCTGTGATCAACTTCCTGGACAAACCGTTTCTGGTTCTCACCAGGTTCCACCAGGAAGTACGGTCACGGGGACGGCTTCCATGTTTCCAAGTATGTCTGTTAATGTCTCCATGAATATGACTTACCATCATCCGGCTCCAACAGGGTATATGGACTGCCAAGGGATGCAGTGGACGACTACACCACAGACAAATTCACCAGggtatattcaaaatcaaaatcTGCTATCTCCAACGTATCCTGGGGCTACGTATTCCTTCACTGCAGACTTTAGGCCTCCCGTTCAAGACATGGGGCCCCTTTTACCTccaacgggaagtagttttaaACCTGTACTAAGTGGAAAAACACAATTCAGTCCTGTACGAAGTAGAAGAATGGTAGGAGTTGGTTATCCTGGAAAATTAGAAGAGGACGAAGGACGACCTAATTTATGTAGAATATGTGgtAAGACCTACGCGCGACCTTCAACGTTAAAGACCCATTTAAGGACccattctggtgagaaacctTACAGGTGTTTGGACTGCAATAAGAGTTTCAGCCAAGCTGCTAATCTGACGGCCCATGTCCGAACCCATAGTGGGGAGAAACCCTTCAGATGTCCAATTTGCGACAGAAGATTTAGCCAAAGTAGTAGTGTTACCACACATATGCGCACACACAGTGGCGAGAGACCTTACagGTGTCGAATGTGCAAAAAAGCCTTCTCAGATTCTTCAACATTAACCAAACATCTTCGAATCCACAGCGGAGAGAAACCCTATCAGTGTAAATTATGCTTATTACGATTTTCTCAATCTGGAAATTTGAATAGGCACATGCGAGTCCATGGAACGGGGAATACAATGCTTGTCTGA
Protein Sequence: MDGCYVPNNPQYGLQLECQWPNSQPQQIHCNGNGNGDPLSLSLSPPAGCWGTPAPPPGDDMGSFSMPLDLDPLPTLFPFSPCTNNYKTESNCGPILHKTEIKPTHDMADVLLSLKHAVVHPGQGGNGPSSPGYVTGYGTQQPQLTYTVHPHQMLMSPTSGYASGFCDQLPGQTVSGSHQVPPGSTVTGTASMFPSMSVNVSMNMTYHHPAPTGYMDCQGMQWTTTPQTNSPGYIQNQNLLSPTYPGATYSFTADFRPPVQDMGPLLPPTGSSFKPVLSGKTQFSPVRSRRMVGVGYPGKLEEDEGRPNLCRICGKTYARPSTLKTHLRTHSGEKPYRCLDCNKSFSQAANLTAHVRTHSGEKPFRCPICDRRFSQSSSVTTHMRTHSGERPYRCRMCKKAFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQSGNLNRHMRVHGTGNTMLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00903570;
90% Identity: iTF_00903570;
80% Identity: iTF_00903570;