Lhae063710.1
Basic Information
- Insect
- Liopterus haemorrhoidalis
- Gene Symbol
- SMARCC2
- Assembly
- GCA_963971575.1
- Location
- OZ020626.1:1656510-1660903[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-14 1.1e-10 43.4 0.2 3 44 304 345 302 347 0.95 2 2 7.1 2.4e+04 -2.5 0.1 8 19 560 571 558 571 0.86
Sequence Information
- Coding Sequence
- ATGGCCGacaacatttttataaacacaatgGGTGGTGTTGGTggtagaaaaaaacaaaaacgaaaaCGTTCTCCATCACCTctttcaaaacaaaataaacgaaaaaatcgTTATCCAATCCTCGGGAACAAATTACGAACAGACGAAGAAATCGAAACAGAACTAAACAAAGAACCAGAAGAAGTAAAAGATATTTCTGAACCAATCCAAGAACCAGAAGAGCCAGAAATTATCGACACAGACAGTAAAAACGATGATGTGGAACCATTAAAAGGTTTTCCTGTAGAAATTGATGGAACAGAAGTAAAAGAAGATTCACAAACAGAAAAAACAAGTGAAACAAACACAGAGGAAGTTAAAAATGAAGATGAAGAAGATAATGTTACTGAACAAACTCATCTTATTGTTGTACCATCATATTCAGCTTGGTTCGATTACAACTCAATTCATATAATAGAAAAAAGAgcattaccagaattttttaacggtaaaaacaaatcaaaaaccCCAGAAACTTATTTAGGGTACAGAAATTTTATTATAGACACCTATCGATTAAATCCTATTGAATATGTTACAAGTACAGCTTGTCGAAGAAATTTAGCGGGTGATGTTTGCGCTATCATGCGAGTTCATGCATTTTTAGAACAATGGGGACTTATTAACTATCAGGTTGAGACAGATTCTCGTCCAACTGCATTAGGACCTCCGAATACTTCCCATTTTCATGTAGCTTCGGACACTCCTTCCGGAATACAAAGTATAAATCCAACGAATACAATACAAACTCCAATAAAATCTTTGGATTTggataaaattgataaaatagaACAGTTTGGGTTGAAATTGGATGAATATATTCGTAAACCAATTGCGATGAGAAATAAATCAGCAGCTTTGATAACACGTGATTGGACAGAACAAGAAACATTATTACTTTTAGAAGgtcttgatttatttaaagATGATTGGAATAAAGTTTGTGAACATATCGGAACTAGAACTCAAGAAGAATGTATATTACATTTCTTACGTTTACCAATCGAAGATTCATTTTTAGATAATACTTTAACAGTTTTGGGTCCATTGGCTTATCAACCACTTCCATATAGTAAAACTGGTAATCCTATTATGTCTACAGTTGCATTTTTAGCTTCGTTAGTTGATCCTAGAGTTGCCGATGCTGCTACTAAGTCTGCGATGGAAGAATTTGGAAATATAAAAGATGAAGTTCCGGTTGCTATTTTGGAAGCACATTTAAAACACGTTGAGACTTCTGTTGTTGATGGAAAATGTGATCCGGAAGCTGGATTAGCACACAGCGGAATAGcagGTACTGTAtctgaaaaagaagaagaagataaagtaaagaaagaaaatgaaacaaaagaACAACAAGCAGAGAAATCGACAACGGAAGAATCTACAATTGAGAAAAAAGAGGAAACTAGTGAACAGGATATTGATAAATCAGGAGAGAAAGTAAAAGCCGAACTCCCCATTGTCAAAGAAGAACCAACAAATGAGGACAGTGAATCAGGAGAAATAACAGGAAAAGAAATTGATGAAAACAAGGAAACACTTCCtgttaaaaaagttaaagaTCCACAACTACAGATGGCAGCAGCTACCGCTTTAGCTTCAGCAGCTACAAAAGCAAAACATCTAGCTGCAGTAGAAGAacgtaaaataaaatcattagtAGCCCAATTAGTTGAGACACAAATGAAGAAACTTGAGATAAAATTACGTCATTTTGAAGAATTAGAAACTACTTTGGAAAGAGAACGTGAAGGATTAGAATATCAAAGACAACAGTTGATTACTGAGAGACAACAATTTCATTTGGAACAATTGAAGGCTGCTGAATTTAGAGCACGACAGCAAGCGCAACAGCGGCTGCAAGCAGAACTAAATAATCAACAATAG
- Protein Sequence
- MADNIFINTMGGVGGRKKQKRKRSPSPLSKQNKRKNRYPILGNKLRTDEEIETELNKEPEEVKDISEPIQEPEEPEIIDTDSKNDDVEPLKGFPVEIDGTEVKEDSQTEKTSETNTEEVKNEDEEDNVTEQTHLIVVPSYSAWFDYNSIHIIEKRALPEFFNGKNKSKTPETYLGYRNFIIDTYRLNPIEYVTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVETDSRPTALGPPNTSHFHVASDTPSGIQSINPTNTIQTPIKSLDLDKIDKIEQFGLKLDEYIRKPIAMRNKSAALITRDWTEQETLLLLEGLDLFKDDWNKVCEHIGTRTQEECILHFLRLPIEDSFLDNTLTVLGPLAYQPLPYSKTGNPIMSTVAFLASLVDPRVADAATKSAMEEFGNIKDEVPVAILEAHLKHVETSVVDGKCDPEAGLAHSGIAGTVSEKEEEDKVKKENETKEQQAEKSTTEESTIEKKEETSEQDIDKSGEKVKAELPIVKEEPTNEDSESGEITGKEIDENKETLPVKKVKDPQLQMAAATALASAATKAKHLAAVEERKIKSLVAQLVETQMKKLEIKLRHFEELETTLEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAQQRLQAELNNQQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -