Basic Information

Insect: Liopterus haemorrhoidalis
Gene Symbol: -
Assembly: GCA_963971575.1
Location: OZ020619.1:6288746-6290602[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 9.5e-09 4.8e-06 28.1 0.0 1 38 15 53 15 59 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	9.5e-09	4.8e-06	28.1	0.0	1	38	15	53	15	59	0.91

Sequence Information

Coding Sequence: ATGGTGCGGAATTATAAGCGAAAAACAGCGCAGCATAAATGGACAGAAGATGCTATGGTTGATGCTGTTTCGGCAGTAAGGGAAGGTATAATGGGTTATAAAGAGGCAGCTGAAACATATCAAGTGCCTTGTACAACCCTGTTTAGACGGGCAAAGAAAGATGGCGATCCAACATCTGTTTCTATAAAGCAATTAGGAAGATTTAGAAAAGTGTttacagaagaagaagaacaagaCTTAGTAAaccactgtttatttttagaaaaaagattttttgggCTAAGAATTTCTGATCTTAGAAACTTAGCATACCAATTTgctgagcaaaataaaaaagaacatcCATTTAATGCAGAAAAAGGAAGGGCTGGAAAAGATTGGGTAGAAGCTTTTCTAAGACGTCATCCGGAGCTATCTCTCCGTACTCCGGAAAATACTTCACTTGCCAGAGCTTCTGCATTCAACCAAGAAAATGTTAAGGTTTTCTTTAACCTGCTTATAGAGCTTCAGGAAAAATTTCGCTTTCCTCCCAGTAGAATCTACAATGTAGATGAAACTGGCATTAGCACAGTCCCTAATAAACCTTCTAAGGTAATTAGTTTAAAAGGAAAAAAGCAAGTAGGAAATGTAACTTCTGCAGAGAGAGGCGTCACCACAACTGCAGCTATTTGTTTTAATGCCGGAGGACAGTACATTCCGCCTTTGCTAATTTTTCCAAGAATTAGGGAAAATACTGAACTTTTACTAGGTACTCCACCAGAAACTGTATTAGTTTGCCATTCTTCGGGTTGGATgcagaaagaaatattttatccaaaatgGTTTGAACATTTTCTTCGGTTTTCAAAACCGTCCTCAACTGAACCAGTTTTATTGATACTTGATGGCCATGCAACGCACACCAAAAATGTTCTACTACTTCAATCTGCCCGAAAGAATAACGTGCACATATTGTGCATTCCTCCACATACGTCGCATCGTCTACAACCCCTTGACGTGTCATTTATGTTTCCTCTGTCAACATTTTACACACAAGAATGTGAAACATGGATGCGGCAAAATCCAGGTCGTTCAATTTCGATTCGCCAAGTAGGCTCACTTTTTGGAAAAGCATATTTAAAAGCTGCCACACCGCAAAATGCCattaatggttttaaaaaaacgGGGATTTATCCTCTTGATCCCAATATTTTTCCAGAAGAGGCATTTTCTGCCAGTGCAACCACTGACCGGGAGCTTTTGGCCAAGCCTGCAGAAGTTTGTGATACTGTAGCTACAGAAAAATCAGTAGTTGACGAAAATCTGAATGAGAGCTGCCCCGATAATAGTCCCCCTATTTTAACAGAGTCATCTCTTACTACAGTCAGTACTTTACCAGTACCTACTGCATCATGTTCATTTCAACAGGAGACGCCAaaagaaacagaaaatatttcaaaatataggaGCCCTGAAGATATTTTTCCAGTGCCAAAAGTAAAGCCCACAAATGAAATCCGAAAACCTATAAAAAATCGTGGTAAGACCGTTGTTCTTACTTCAAGTCCATATATACAGGAACTACAAGAAAAGAAAGCTCAGCAAAAGGTTCCAAAACGAAGGCTTTTTGAAGAGACACCTAAagttaaaaaatcaaagaaattaaaaactaaacctatatttcctgaTTCTGATTCTAATGAAGATGATGAAAATGATGCTCAATGTTTAATTTGTGGTGAACATTTTCTTAAATCAAAACCAGGCGAGGGCTGGATTACCTGTTCCGCATGTCATCTCTGGGCTCATGAAGAGTGTTCCAGTTTTGATGCCGACAATAGTAAACCATATGTTTGCGATTTCTGTTTACTATTATAA
Protein Sequence: MVRNYKRKTAQHKWTEDAMVDAVSAVREGIMGYKEAAETYQVPCTTLFRRAKKDGDPTSVSIKQLGRFRKVFTEEEEQDLVNHCLFLEKRFFGLRISDLRNLAYQFAEQNKKEHPFNAEKGRAGKDWVEAFLRRHPELSLRTPENTSLARASAFNQENVKVFFNLLIELQEKFRFPPSRIYNVDETGISTVPNKPSKVISLKGKKQVGNVTSAERGVTTTAAICFNAGGQYIPPLLIFPRIRENTELLLGTPPETVLVCHSSGWMQKEIFYPKWFEHFLRFSKPSSTEPVLLILDGHATHTKNVLLLQSARKNNVHILCIPPHTSHRLQPLDVSFMFPLSTFYTQECETWMRQNPGRSISIRQVGSLFGKAYLKAATPQNAINGFKKTGIYPLDPNIFPEEAFSASATTDRELLAKPAEVCDTVATEKSVVDENLNESCPDNSPPILTESSLTTVSTLPVPTASCSFQQETPKETENISKYRSPEDIFPVPKVKPTNEIRKPIKNRGKTVVLTSSPYIQELQEKKAQQKVPKRRLFEETPKVKKSKKLKTKPIFPDSDSNEDDENDAQCLICGEHFLKSKPGEGWITCSACHLWAHEECSSFDADNSKPYVCDFCLLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00903020;
90% Identity: iTF_00903020;
80% Identity: iTF_00903026;