Lhae041205.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Liopterus haemorrhoidalis
Gene Symbol
JARID2
Assembly
GCA_963971575.1
Location
OZ020618.1:11639247-11655433[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.8e-22 1.3e-18 69.1 0.0 6 89 1149 1230 1145 1230 0.93

Sequence Information

Coding Sequence
atggttATCAGTAGAAATGATATTAAACGACGGCGTAAAGATAGTGATACCACTGTGGATACGCTTCCAGATAGTCCTAAAAGAACAAAAGTACATGCACAACGTAAGTTTGCGCAAGGATCAAATGTAAGCAGTCCGGTTATAACTCCAGTAAAAGAAATCGagaaagaaaaaatcaaaataactgAAGTGCTACCAGCTCCTACTGAACTCCTGCCTGTTTCGAGACCAAATACTGAAGATTTCTTAACATTTCTCTGCTTTCGAGGCACACCAATATTACCTAcaagtctaaattttttcaatacttCTGCAGCTGTCAAAAACGTAACTGAAGAAGCCGAAAAAGaatcaaaaaatgaaaaaacaaatgattCACCAGAACAAAAGACTGATAGACCATTTATTGCGTTTGGTGTTAGAAAACGTGCAGATCCTTTCGTATCaagtaaattagaaaaaaagcgACGTCATACATTAGCTTTGCAAGCTTTACGTAGAAAATATCAAGAACAACGAATGGCTAAAATACGAGCTGttacaattgaaaaaatgaatcaaggtgttaaaataaaaagtaaaaacttaGTTCAAACTAGATCTGTAACAAAACGCGAAGCTACGACTagttctaaaaaaattattaaaaaagttatttcgaaGCATGTTAAAATTACAACCCGAACTGTTAAACGTCCTATTATGAAACCAAAAATGTGTTTACGAAGTCGTGGTAGATTCATACCACGAGAGTTAACAACTCCCGTTAAACCAAAAATGAAACGACCCATTGTAAAAAAGAAAGTTGTgccacaaaaagaaaaagatAGTTCTTCGGAATTCTCATCGGATGATAACCAACCGTTAGTTAAAGCAGTACGTAAAAGTGCCAAACCCGTTAAACCACAAccgaaaatagtaaaaaaattagtacCGTCATCCAGTACAAAAGAACGAATAATACAgaataaacaaacaattacaaaagaacaaataaaccagaataaacaaacaattacaAAGGAACAAATAAACCAgaataaacaaacaattacaaaagaacaaataaaccagaataaacaaacaattacaAAAGAACTAATAAACCAGAACAAACAAACAAGTACAAAAGAACAAATAATCCAAAACAAGCCAACAAGTACAAAAGAACAAATAAATCAGAACAAGTCGAGTACAAAAGAACCAATTCGGGTAACTAGAAGTACTCCTGCGCCTAAATTACCAAGCCCAGTTCCTCAAAGACCGACTAGAAAAACTAAGGAAGCAGCTGCTGTATATATGAATCTTCTGGGTGCAAAACTAGTTACGCCCTCAAAAGTAGATGAAGAAGATGATGCTTCAATCGATAGTTTTCCTGAATTACCAAACGTTCGTCGCACCGAGCAAAGAGAAAATGAAATGAAAGCTAAAGTAGTAACAAACAACACTAAAAGAATTATTACAAGAAAATCAATAGAAGCCGTTAAGAAAAAAATAGAGAAACCAAAAGAAAAAATCATACCCAAAActcgaaaaataataaaaagaaatgatgatgaatcagaaaatagtagtaaaaaatcAGAGAAGAAAGTAAAGCTGGTGAAAAAAGAATTACGATCAAAGAAACCAGTAAAAAAACCAATAACTAAAAGCAAAACCGATCAGAGTTTTAGTGATTCAGATGAAGAACCATTagtaaaattaacaacaaaaaagaaaaatgtacctTTGAAAAAAGATATTGCAAAACCAGAAAATAAAACAGCTAAAAAATCAGAAAcaactacaaaaacaaaaacaaattcttCCAAATCTGACAAAATATTTCCTTCTGGATCAGTTTCAGATGATGACGAAAAAGCTTTCCGAGGATTTGTAAAATCCGAAGAACCAACATTAATCCAAACAATGCTTCAAAAGAGTGTTTGCTTACATTCCGAAACAAAAGTAGCACCAGCAAGTGCAGATCTACTTTGCAAAGACGTAGGTCGAAGATTTGGTAAAGGGAAAGTAAATATGTCCACAGAACAAATAGAAAAATGGCTAAAGGACAGTGCAATGGCGGGAGAGtgcaacaaaaatgaaaaaaagtaCGATGAAGAAATagtaaaatttgaagaaaaagaTGAAACTAAAATAGAAACAGTGACTTCCGTACCAACTACTTTTGAAGAAAAACAAGTAACTATTAAACAAGAAAAACCGGATGTAGAAACACAagttaaagaagaaaaaattatacttaaagaaGAAACAAAAACACCAACAACCCCAACAAAACCAGATAAACCTCCATCTGGTGAAAGAAGATGTATTTTTCAACAACGTAGATCAATCTTAAATAAAGATCGAAAAGAAACACCAAACAGCAAAGCATTTTCACCAAACAATGAAAGTAGTGTTTACGCATTTGAAGCTGACTTTGAAATGCCTGTTAACACTCCTTTTCGAAGCCAAATCCGTAGACCTTCAAGTACCGCAACATCAAGATCCGAAGACGATTCTTCGAAACATGAAGATGATGAAAAGAAGAAACTGTTTAGTAAATTTAGATTACCAGCAGTTATAAAACCACCTGTTACTAAAACACATGGGAAACAGGAAGTGTCTTTGACTTTATCTGCTGATGAAGCAAATAACAGTGCTTCAATTGCAGTTCAAGTTAATTTGGACTCGGGAGCGAGTTTTTCAGACAATAATGTTAGTATGGAATGTTCAACACAGACAGATACAGGGGATGAAGACGGAGATGGTCATTTGTTCTACATTCCTCTACAACCAGGTAAACAAAGTACTTCTACGCAGCCAATTATTCAAGGAGTAACTGTTAAACTAGGCACAGAAGGCTTAAGTGGGGCAAATCAACGCGTTGTAATGAGAGCGAAATTAGTAACACAAACCCCAGACAACAGGTTACCACTCGCTTTAGGCCAACAAAAACCATTAGCCCAATCAACACATATGTGTCCTCCAGTTGGCACAGTACAACCAACCTACAGACCAAAACATCCAGAAAACCAAAAACAAACACCAAAACATGTTCCATGTTACGACTCATCAAACTTtgacaacaaaattacaattCCTAGTTCTCCAAGTGCTTCATCTTCATCAAGtgctaaaatttataaaagaccaacaaaatcaaaaatgagACTTCTTGATGCCTGTCCTCCAAGTAATTCATCATCATTCCCACAGTTAGGGGCCCCTGGACAACTTGTAGATGCTCTTACATTCACACCAACTGAAAGAGAATTTCAGGATCCtattgaatttattgaaaaaataagacCTTTGGctgaaaaatttggaatttgcCGTATAATTCCACCTGCTACATTTAAACCTGAATGCAAAGTTGCTGATGATATGCGATTTACAGCTTACAACCAGCATGTTCATAAAATGTTACATAGATGGGGCCCTAATTTTAAAGAATTAATGGCTATTAAAAAGTATTTAGCGACTCAAAGTATAACACTAACTCATCCGCCATGGATTGGAGGTATGGAAGTAGATTTACCAAGACTATATCAAACTGTTCAGTCTTTAGGTGGTCTTAAAGAAGTTATAGAGAAAAAACGATGGCCAAAAGTAGCAGAAGGGATGAAAATACCAAAATCCGCACAAGATCGTGTAACAAAACTAGatgacatttattgtaaataccTATTACCTTATGATACTTTATCCCCAGCTGAAAGAGAAAAACTTTTTGATGAAATTGAAACAGACTGGGCAAAACATGAAAGTAGAATACTCGCAAGAACTCaacaaaaagaagaaacaaCAAATGAAAATGAATCTGATGTAGAATCTGATGATGAGGCTGAAGAATGTATTACAAAAGGAAGAAATATGGCTTTGAATGCTTTTTATCGAATTGCTCGAAATACTATGAGTATGTGGTTTAAAACACCTGAACCAACAGCTCAAGAAGTTGAGCAAGAGTTTTGGAAACATGTAACTTCAAAACAAAGTCATTTGTGTGTACATTCGGGTTCTATTGATTCAAGTGGTTGGGGATATGGGTTTGCTTGTAATAAAAATAGTCCTTTTGCTCGACATCCTTGGAATTTGAAGATTTTGACTAATAATAGTGGATCTATACTACGATCAATGGGACCTCTCATGGGAGTAACTATACCTACTTTGCATGTTGGTATGGTATTCAGCGCCTGCTGTTGGTATAGAGACCCACACGGCTTACCTTGGATAGAATACCTACATACAGGAGGCAACAAAATCTGGTACGGAATACCTGATGCATTCAGCGAACAATTTCGAGCAGCGTTAACCAAATTAGTACCTAGTTACATCCGTAACAAAACACTCTGGCTATCCTCAGACACCGCTATGATTCCACCAAATCTACTCACTGCAAATGGAGTTAGTTTATGTCGAACTGTCCAAGAACCTGGACAATTTATTGTAGTATTTCCAAAAGCTTTCACATCGAGTATTTGCAGTGGTTACGTTGTATCTGAAAGTGTTTATTTTGCACCGAGGAATTGGTTATTAACTGCCAAACAAGTGTTCAAAGATATTAGAGATAGTTGTGAGCCTTCAATGTTTTCTTGGGAAAGATTATTGTTGAGCATATCAAATGATACAAGATCTAATACTGAGGTGTTAAAACAAATTCTTCCATACATTCAAAGTTTGAAGGAGTATGAGAAAACAGCTAGAGATAAATTAGTTACGTTAGGACTTACAGTTACGGAGAGATTACATTTACCTGATGTTATTAATGGAAGACGAAAACGTAAAATGCAAGAAGATGATGGAGAATATGAATGTGAGATTTGTAGGACTAATTTATATGTTTCATTGGTGACAAATTCCCACGAAGAGGGTGTATATTGCCTAGACCATGCTGTTGAGCACATCGAAAAGAAACCAGCACAGCTAAAATACTGCAAGCTAATGTTCACATACGACATCTCTGAACTAGATAATTTAATAGAAAGAATTAAAATGAGTATCGAAATGAAATCTCAGCGTAAAATACCTAGTAAATTTGCTGGTATGGCAActttactaaaataa
Protein Sequence
MVISRNDIKRRRKDSDTTVDTLPDSPKRTKVHAQRKFAQGSNVSSPVITPVKEIEKEKIKITEVLPAPTELLPVSRPNTEDFLTFLCFRGTPILPTSLNFFNTSAAVKNVTEEAEKESKNEKTNDSPEQKTDRPFIAFGVRKRADPFVSSKLEKKRRHTLALQALRRKYQEQRMAKIRAVTIEKMNQGVKIKSKNLVQTRSVTKREATTSSKKIIKKVISKHVKITTRTVKRPIMKPKMCLRSRGRFIPRELTTPVKPKMKRPIVKKKVVPQKEKDSSSEFSSDDNQPLVKAVRKSAKPVKPQPKIVKKLVPSSSTKERIIQNKQTITKEQINQNKQTITKEQINQNKQTITKEQINQNKQTITKELINQNKQTSTKEQIIQNKPTSTKEQINQNKSSTKEPIRVTRSTPAPKLPSPVPQRPTRKTKEAAAVYMNLLGAKLVTPSKVDEEDDASIDSFPELPNVRRTEQRENEMKAKVVTNNTKRIITRKSIEAVKKKIEKPKEKIIPKTRKIIKRNDDESENSSKKSEKKVKLVKKELRSKKPVKKPITKSKTDQSFSDSDEEPLVKLTTKKKNVPLKKDIAKPENKTAKKSETTTKTKTNSSKSDKIFPSGSVSDDDEKAFRGFVKSEEPTLIQTMLQKSVCLHSETKVAPASADLLCKDVGRRFGKGKVNMSTEQIEKWLKDSAMAGECNKNEKKYDEEIVKFEEKDETKIETVTSVPTTFEEKQVTIKQEKPDVETQVKEEKIILKEETKTPTTPTKPDKPPSGERRCIFQQRRSILNKDRKETPNSKAFSPNNESSVYAFEADFEMPVNTPFRSQIRRPSSTATSRSEDDSSKHEDDEKKKLFSKFRLPAVIKPPVTKTHGKQEVSLTLSADEANNSASIAVQVNLDSGASFSDNNVSMECSTQTDTGDEDGDGHLFYIPLQPGKQSTSTQPIIQGVTVKLGTEGLSGANQRVVMRAKLVTQTPDNRLPLALGQQKPLAQSTHMCPPVGTVQPTYRPKHPENQKQTPKHVPCYDSSNFDNKITIPSSPSASSSSSAKIYKRPTKSKMRLLDACPPSNSSSFPQLGAPGQLVDALTFTPTEREFQDPIEFIEKIRPLAEKFGICRIIPPATFKPECKVADDMRFTAYNQHVHKMLHRWGPNFKELMAIKKYLATQSITLTHPPWIGGMEVDLPRLYQTVQSLGGLKEVIEKKRWPKVAEGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPAEREKLFDEIETDWAKHESRILARTQQKEETTNENESDVESDDEAEECITKGRNMALNAFYRIARNTMSMWFKTPEPTAQEVEQEFWKHVTSKQSHLCVHSGSIDSSGWGYGFACNKNSPFARHPWNLKILTNNSGSILRSMGPLMGVTIPTLHVGMVFSACCWYRDPHGLPWIEYLHTGGNKIWYGIPDAFSEQFRAALTKLVPSYIRNKTLWLSSDTAMIPPNLLTANGVSLCRTVQEPGQFIVVFPKAFTSSICSGYVVSESVYFAPRNWLLTAKQVFKDIRDSCEPSMFSWERLLLSISNDTRSNTEVLKQILPYIQSLKEYEKTARDKLVTLGLTVTERLHLPDVINGRRKRKMQEDDGEYECEICRTNLYVSLVTNSHEEGVYCLDHAVEHIEKKPAQLKYCKLMFTYDISELDNLIERIKMSIEMKSQRKIPSKFAGMATLLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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