Lnew005178.1
Basic Information
- Insect
- Liometoxenus newtonarum
- Gene Symbol
- nfxl1
- Assembly
- GCA_030264535.1
- Location
- JARJEB010008240.1:1017-6913[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 2.3e+04 -8.1 5.6 15 19 139 143 138 143 0.81 2 19 0.56 6.4e+03 -2.3 0.9 4 10 174 180 174 180 0.91 3 19 3.7e-08 0.00043 20.6 17.0 1 19 188 205 188 205 0.99 4 19 1.6e-08 0.00018 21.8 13.3 1 19 241 259 235 259 0.91 5 19 0.86 9.8e+03 -2.9 1.9 6 10 284 288 283 288 0.90 6 19 3.5e-09 4e-05 23.9 15.4 1 19 294 312 294 312 0.99 7 19 0.00012 1.4 9.4 12.4 1 18 347 364 347 365 0.91 8 19 0.12 1.4e+03 -0.2 0.9 1 5 374 378 374 383 0.90 9 19 0.00046 5.2 7.5 13.5 1 18 399 416 399 417 0.94 10 19 7.1e-06 0.082 13.3 13.1 3 18 428 443 420 444 0.85 11 19 0.00024 2.8 8.4 5.8 10 19 493 502 490 502 0.92 12 19 0.52 5.9e+03 -2.2 5.6 4 12 514 522 512 522 0.86 13 19 2 2.3e+04 -4.4 8.5 14 19 550 555 550 555 0.94 14 19 0.04 4.6e+02 1.3 1.1 5 12 568 575 565 576 0.90 15 19 2 2.3e+04 -4.7 1.4 6 10 581 585 580 585 0.58 16 19 1.2e-05 0.13 12.6 6.7 1 12 591 602 591 602 0.96 17 19 2 2.3e+04 -5.4 3.7 5 10 618 623 616 623 0.86 18 19 4.4e-05 0.51 10.8 16.9 3 19 632 648 631 648 0.92 19 19 1.9e-05 0.22 11.9 10.0 1 18 691 710 691 711 0.86
Sequence Information
- Coding Sequence
- ATGAATCCACCaaagaatattaaaaacaatccATGGACTAAAAACAATCAGAATAATGTAAACCTAAAAAAAGGCGAGGAAAAGTTCAAGCAAGCGCAACAAAAACTTAAAGAAGCTGCGAAGAAATATGCCAATGACTGTGAATCGtccgaagaagaagaagaactcGAAAAGGAGAACATAATCATTAATGTCCTGCAACGGTACGCCCAAGCTGGGAGTACTTGTAATGCTGATTTAGGTCGGACCAACAATTTCCTGCAAAATGCATTTCTCTCTGGTGCCTCAACATGTCTCATATGTATATCttcaataaaaagaaacgaatCGCGTTGGTCGAAAGACACAATATATCAACAAAAGCAAGCTCTGGAAGCCCAGATACAAATCAGGCGAATCACATTGAAATGGTGTTGTCCGAAGTGTCGTTCCGAGTACAGTCCTGATTACTTTCCAAAAGACTACTTGTGTTTCTGccgaaaaacaacaaatccaGGTTATCAACCTCTAATTGTGCCACACAGTTGTGGCAACACTTGCGGAAAAGACCTGAAGCCAAATTGCGGTCACAAATGTCTTTTGCTTTGCCATCCGGGACCTTGTCCTCCTTGTCCGCAAACCGTTAAAGTCACTTGTTACTGTAGGTCGGGTCCTGCGAAGCCACAAAGATGTACAAACAAGGAATGGAGTTGTGGTTCACAGTGTGGTAAGCTGTTAGCTTGCAATAAACACAAGTGTTCAGAGATATGTCACTCGGGTGATTGCAAACCATGTCCTAAGAAGAGCATGCAAAAATGCCTTTGTGCTGCTGGAATTAAACTACGTGATTGTTCTACACCAATTTGGCAATGTGAAAAGGTATGTAGCAAACCATTGTCTTGTGGACATCACAAATGCGAGGAAATATGCCATCCAGGTGCGTGTGATGTTTGTCCACGTTCCAAACTTCGTTCCTGTCCTTGTGGGAAAACCCCCATTGAGTTACCATGCACTGAGGAAGTTCCTACATGTGGTGACACTTGCAATAAGAGTCTTGATTGTGAAATACACGTGTGTCATCAACGATGTCACAAGGGCAAATGTCAAATTTGTTTGGAAACTGTCACTAAATCTTGTAGGTGTGGACAACATACGAAGGAAGTTCAATGCGGCAAGCTTTATTTGTGTGAAAGCAAGTGCAAGCAACTACGTGACTGCAACAAACATACTTGCAACAGAAAGTGTTGCGATGACAACTGTCCGTCTTGTGAAAAACCATGCGGTAAGACTTTGAGTTGTAAGAAACATATCTGCAGTTCAATCTGTCATCAAGGCCCTTGTTATCCTTGCAATTTAACCGAAAACGTTTACTGTTTTTGTGGTGACACTAATCTCACTGTTCCTTGTGGAAGAAAAGCAAGGACGAAGCCACCAAAGTGTGGTATTTCTTGCAAaaTTCCACCTGATTGTCACCATAAATCACGCGAAAATCACAATTGCCATTTCGGCGATTGTCCTCCATGTCGTCAAGTGTGCGACAAACAACTTCAAAAATGTACCCATCTCTGTCTTGCTAAGTGTCATTCTTCGGTCCTTGTAAAGCTAAAATTACCTCGTGCTGCTACACCATGGGAAGAGAAGGGTCCCCAGGTGGATAAACGTTGCTTACCTTGTCCGCCATGTCCGGTACTTATACCGATAACGTGTTTCGGAGGGCATGAAACGTGTGACTATCCATGCCATGAGGCGAGACCAATTAGTTGCCATCGTCCATGTAACAGAAAGCTTCCATGTGGCAATCATACTTGCACTCTGCCATGTCACACCGTTGAAAATCCCAAAGATGCTCTAACGGCTGGTCGCAATTGCGCAACTTGCGAACGTCGATGCGCCAAAGCACGAGTCGAAGGATGCACTCATCAGTGTCCAAGGTCCTGCCACACTGGAACTTGCCCCCCATGTAAGAGCATGTTGAGAATTACATGCCACTGCAGCTTATCGCAACCGTACGTTAACTGTCACGATTGGACAACTACTGGTGATAAGGATGCTTTGCAAAGTTGCGGAAATCAATGCCCATTAAACTTTCCATGTGGACATCGTTGTCGTGCCAATTGCCACTCTGGTATGTGTCCCAATGCTGATCAATGCAAAAAGAAAGTTAAGGTGTTTTGCGAGTGTAAGCGTATCAAGAAAGAGTATCCTTGCGATGTGGTGCGTAATACTAATGTTGTGGTGCCTTGCGACGATAATTGTAAGCAGAAGCTGTTGGAATATGTGGAGAGCAAAAGAATTCAGGatttggaaaaacaaaaacatcaaGAGGAACAGAATAAACGTGAACTCGAAAAGTATGAAAAGATGTTTGCCAAGAAGAAGCACCGCGATAGAAAGAAAATGTTGGAACAACAACCAGCAGTCTTAAATAATGCATCTTCACATAGTGCCATGGACAAATCGAGGCGACATGCTTCAATGGATGAGAAACGAAACATTGATGAGGTTTTTAATGATGATTGCGACGAAAGCTTGGAAAATCCTGAAGAAGCCATGGAGGTGACGACCGCcaaagttaaaagaaaaagaaaatatgcgAACAAATTAATGCTTTCCGAATGGATGATTGAGAAACCCTATGATTTGGATTCACAGTGGTTGATTAAAGTGTGTCCTAAAGGTGTTAGAAATATAGTTGTTGCACATAAGACTGAATTTCGTTTCTTCTTCCTTAAATCTAAGATGCAAGAATGTCCAATGgttaaacaaatttgtaaaGGAAACAAATTCATATTCAATACTTTGCCATATAAAGCAGCACAATTGGCTGAAATTGAGGAAATATTTAGTCGTTTCGATAGTGAAGTTGATGGTGTATTGTTCTATCATTCAGAATTATGTTATTTATCCGAAACAACACCGCTTGTTGGTTGGTTGAAAGTGTTTATGATGCCCGAAATTTTAAGCCTACCTGTACATAGTGATTATTTCCTAGAGAGACCTGAGGGATACACTAATTTGTTAGAGTATAATCAGAGTTATGAGAAAATTAAGAAGAAGCGGTCGAATAAAATACCCGATGTTGAGATGCTTGACGAAACATCGAATGgtgatattttacattaa
- Protein Sequence
- MNPPKNIKNNPWTKNNQNNVNLKKGEEKFKQAQQKLKEAAKKYANDCESSEEEEELEKENIIINVLQRYAQAGSTCNADLGRTNNFLQNAFLSGASTCLICISSIKRNESRWSKDTIYQQKQALEAQIQIRRITLKWCCPKCRSEYSPDYFPKDYLCFCRKTTNPGYQPLIVPHSCGNTCGKDLKPNCGHKCLLLCHPGPCPPCPQTVKVTCYCRSGPAKPQRCTNKEWSCGSQCGKLLACNKHKCSEICHSGDCKPCPKKSMQKCLCAAGIKLRDCSTPIWQCEKVCSKPLSCGHHKCEEICHPGACDVCPRSKLRSCPCGKTPIELPCTEEVPTCGDTCNKSLDCEIHVCHQRCHKGKCQICLETVTKSCRCGQHTKEVQCGKLYLCESKCKQLRDCNKHTCNRKCCDDNCPSCEKPCGKTLSCKKHICSSICHQGPCYPCNLTENVYCFCGDTNLTVPCGRKARTKPPKCGISCKIPPDCHHKSRENHNCHFGDCPPCRQVCDKQLQKCTHLCLAKCHSSVLVKLKLPRAATPWEEKGPQVDKRCLPCPPCPVLIPITCFGGHETCDYPCHEARPISCHRPCNRKLPCGNHTCTLPCHTVENPKDALTAGRNCATCERRCAKARVEGCTHQCPRSCHTGTCPPCKSMLRITCHCSLSQPYVNCHDWTTTGDKDALQSCGNQCPLNFPCGHRCRANCHSGMCPNADQCKKKVKVFCECKRIKKEYPCDVVRNTNVVVPCDDNCKQKLLEYVESKRIQDLEKQKHQEEQNKRELEKYEKMFAKKKHRDRKKMLEQQPAVLNNASSHSAMDKSRRHASMDEKRNIDEVFNDDCDESLENPEEAMEVTTAKVKRKRKYANKLMLSEWMIEKPYDLDSQWLIKVCPKGVRNIVVAHKTEFRFFFLKSKMQECPMVKQICKGNKFIFNTLPYKAAQLAEIEEIFSRFDSEVDGVLFYHSELCYLSETTPLVGWLKVFMMPEILSLPVHSDYFLERPEGYTNLLEYNQSYEKIKKKRSNKIPDVEMLDETSNGDILH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -