Basic Information

Insect: Liometoxenus newtonarum
Gene Symbol: -
Assembly: GCA_030264535.1
Location: JARJEB010033052.1:6162-10828[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.27 21 6.2 0.1 2 21 288 307 287 310 0.88

2 16 0.00098 0.076 13.8 0.4 1 23 398 421 398 421 0.97

3 16 0.11 8.9 7.3 0.3 1 23 459 481 459 481 0.97

4 16 0.079 6.2 7.8 1.5 1 23 512 535 512 535 0.97

5 16 9.6e-05 0.0075 17.0 3.7 1 23 538 561 538 561 0.96

6 16 0.08 6.2 7.8 3.0 2 23 568 590 567 590 0.95

7 16 0.0021 0.16 12.8 4.1 1 21 702 722 702 723 0.95

8 16 0.0065 0.5 11.3 1.4 2 23 735 757 734 757 0.91

9 16 5.4 4.2e+02 2.1 1.1 1 23 760 783 760 783 0.94

10 16 0.013 0.99 10.3 0.0 2 23 789 810 788 810 0.93

11 16 0.41 32 5.6 0.1 1 23 814 837 814 837 0.96

12 16 1.1 86 4.2 0.4 2 23 844 866 843 866 0.94

13 16 0.13 10 7.1 0.9 2 23 875 897 874 897 0.94

14 16 0.3 24 6.0 0.1 3 23 904 925 903 925 0.91

15 16 4.1 3.2e+02 2.5 3.9 2 23 1065 1087 1064 1087 0.94

16 16 0.27 21 6.1 0.8 1 23 1129 1151 1129 1151 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.27	21	6.2	0.1	2	21	288	307	287	310	0.88
2	16	0.00098	0.076	13.8	0.4	1	23	398	421	398	421	0.97
3	16	0.11	8.9	7.3	0.3	1	23	459	481	459	481	0.97
4	16	0.079	6.2	7.8	1.5	1	23	512	535	512	535	0.97
5	16	9.6e-05	0.0075	17.0	3.7	1	23	538	561	538	561	0.96
6	16	0.08	6.2	7.8	3.0	2	23	568	590	567	590	0.95
7	16	0.0021	0.16	12.8	4.1	1	21	702	722	702	723	0.95
8	16	0.0065	0.5	11.3	1.4	2	23	735	757	734	757	0.91
9	16	5.4	4.2e+02	2.1	1.1	1	23	760	783	760	783	0.94
10	16	0.013	0.99	10.3	0.0	2	23	789	810	788	810	0.93
11	16	0.41	32	5.6	0.1	1	23	814	837	814	837	0.96
12	16	1.1	86	4.2	0.4	2	23	844	866	843	866	0.94
13	16	0.13	10	7.1	0.9	2	23	875	897	874	897	0.94
14	16	0.3	24	6.0	0.1	3	23	904	925	903	925	0.91
15	16	4.1	3.2e+02	2.5	3.9	2	23	1065	1087	1064	1087	0.94
16	16	0.27	21	6.1	0.8	1	23	1129	1151	1129	1151	0.96

Sequence Information

Coding Sequence: ATGGAGGCGGATATGGAAGCCATCAACGAACAGCGGCAACGTCTCTGTCTGCTATGCGCCACCATCACCACGCACCCCAATTACGTCGACATCTTCATCGTCGACGGCCTATCACACAAAATCGAAACTTGTTTACCCATTCAAGTACGGAAGAGCTCTGAGTTACCTGATATGCTATGTTTGCAATGTACGGACGCAATTGATGCGTTTTACGAGTTCCGAAGGCGTTCCCTTGAGACTTTGGCGATTTTAGAAGAAAAGTACCAAACAAATCGTTCATGTTTCATTTCTCGGCATAAATCACCATCAATAAATGATAAAAGCACAATAACTGACAATTTGCAAGCGGAGCTGACACAATTCGAAGaatggaaaatgaagaaactCGGCCAATTCCACTTGGAAGCGGACTCGTCGGCGACAATTCAAAAAAGTCAACAAACAATCAGAGATTGTGCCCTCGAAATAAGCAAAGCGGAAGAATTACTATCAACAACAGCGATCTACACAAACAAATTGGTCGATTATGATTCGGACGATTTGGCGGACGTGGAACAAAATGCGAAAGCAACAACAAGTTTTACCAATATACgtaacaaattgtattttgatGATTCAGTGAACGATATTATAAGTGAAATTGTTGAACGGAAATCTACGAAACGCAAGTTGGACGTTGTTGTGGAATGCGACTTACAGCTGATGCACAAACCGAAAATGTTTAAGCTTAACGAGACGATTCAATCACTGAATCGTCGCAAAACACGACAACCGATTAAACGACGCCATCTTATCACCAGCAGTCAGAATTCAATGATTTCGAAGCAAACGCAACGGGCGGATGTAGTGAATTTGCCGCAGGTGTGTCTTCTCTGCGACCAGCAATTTGCGAAAGGTAGTGCGTTGGCGCGGCATGTATTCGACACTCATGGAATTGACATGGCGCAAGTATTAAGCAACGAACCCGTACCGGAAATTATACAGAGATCGCTACAAGTTGCAAGTGCTCTGCAAACCAGTAACGGTTTGCAACTTGACGATTTCGACGCGAAATCACCGAAGAGTAGTCCCGAAAAGAAAGCAGCCAAGAAGTTACCAGAACTCGTAAAAATAACTGATCTCAAGACAAAACGCGAATCTATAGAAACGAAGCATGTAGAAAACGATGCGCCACCAACATTGACAGCTAGTTATGTCTGTCCACTATGTCCAGCGTCTCTGACAAACAAATGCGATCTCTACGCGCATCTCCGACTCCGTCATTCGCAGCACGCGAAGCTCATTTGTGGCCTGTGTCTGCACATCGCTTCCTCCCTGGGCAGCCTGCAGGAACACGTTGACATTTGCGTCAAGTCGCATCCCACGCTTGGCTATTTCATCTGCCAGCTGTGCAAATACTCTGACGACAATCAAAAATCGCTCGAGAATCATATCTTAGTGCATGACTTCCTCCTCGGCGAGTGTAAAAAGGACGGGAAGATCTTCGATCCGGCCGATTACATCGAGACGAATATTCTTTGCGATGCTAAGACGTATTCTTGCACTGAATGCCAAACGGTACTGATGAATTTCAAAGATTTCAGCAGCCATCGCCGTTCTGAACATTCCATCTTTCATTGTGACCTCTGTAATAAGTCGTATGGAAGGAACTCGCATCTTTGGAAACATGTCAATCGTGTACACAAAGGACATCCAAGCGTCACCTGCCAATTCTGCTATCGGACAAGTGCATCCAAGTATCATCTGATGCAACATTTCAATAAGATACACACGCAGAAGAGTACCAGTGGTGCTGGCGGTGGTGGGGCAAGTGGAAAAGTGCGAAATGGCGATTTGAATCTGTTCACGACGACGCCCGGGGACAGTGATGAGGACTTTATGTCGAAGCGGTTTGAAGGTTTTGACTTCCAGTCGGTGCGTCAGAAGTTCATGCGGCAAGAGTTACAAGGTAAGGATAAAGCTGTACAAAGGAGGGTGGAAGTGATCAAAGACGACAAGTTCACAAATGTTGAGGATTCAGTGCCGCCCAAGGAGTTGGACTCGTCATCGACGATCTACACGAATATCATCACGAATTACACGCCTCCGAGTAACGATGGCGAGTTCAAATGCCCGAAATGCTCGAAAGCCTTCCACAAACGCACCCTACTCAAAAAGCACAAGAAGAATTGTCGTCCGCGGCTCCAAAAAGACCTCCTCACAAGATGCAAGTCGTGCTCGCGCATTTTCAAAGACCGGCAGTCGCTGGCGAAACATCTGGTCAACTATCACAGCGAGTACTCGTGCGAGATGTGTGCCGAAAAGGTGCAATCGAAATGTGAGATTGTCTCACATATAAGATTCACCCATCCGGAGAGCAGGCTCGTCTGCGTCGAGTGCGGCAATGTGTTAAGAAACAATGATCTCTTGCGTGCACATCTCGCTGATCACAATAACTCATTTGTGTGCCAATTCTGCGGGGACATTCTGCCGTCGAAGATCAAGCTGAAAATGCACATTCTAAGTCTGCACCGAAAGATACTGAGTCTTAGCTGTGGCGTTTGCCTGAAACTCTTCGAAAACCAGCATATTTTACGTGACCACGTACGGTTGGTGCACAAAGAGGCTTTGCAACCGTTGACGAGTTGCACGGTGTGCGGTAAAAACTACGGCAGCAAGTGGAAGACGTACGATCATTTGAACAAGAGCCACGGACGAGTGTTCAGAGCGTGCAAGAGCTGCTTGGAGGTGTTTAACAATGAGCAAGAATTGCAGATACATTTCGATATTATGCATGCGAAAGGTGTCAACAAGAAAGTGGTGACTGGCAGCGAATCGGTACTTCCAGAAAAGGAACCGCCAATTCAAGTACAAATCAAAGAAATCATCGTGGAACAAAATGGACCTGCTGCTGCGGCTGAACAGGACGAAGTGCAAGAGGAATCAAGAAGCAGCCATGATTCTGATGGCGAATCCTCCATTTTGGAGAAACATCTGcgccaacaacaacaacaacaacaaccaccaCCCATCAGTCGGAATAATAACGCATCGAAAATAAACGGTGGTCCTGCACCTGTTGTACCAAAAACCCCCAAAACCACGAACAAACCACCATTGTCGATGTCATTGCCAGCGACACCCAGCGTTGACACGGATGCGTTGATAAATTCTTCCAAGCGCACCGTTTATGTCAACTCGAATGACCCTTCCGTGTGTGACATCTGTCATAAGAACTGGCCGGCGAAGAAACACCTCTGGCAGCATTACATTCGTTGCCATAAAGACGTAGCTGCGACGGTATGTGGCATCTGTTTGTGTACGAATGAGTCGTATGAAGAGCTCCAGAGGCATTTACATCGGGAGCATCCAACGTTGTTGCATGGCAAAGGATTCGGTTCGAACTTTATCTGTCGCATTTGCGGCAGGTATCACAATGCCAGCAGTAAGTTGCGATTGCATATGGCGATACACACGAAATTCGATTGGGGTTTATTGGAGGAGCAACGAAATGGTCCGGTGGTGAAGGAGGAAGTTGAAGATGGTGAACAACACGAAGAGGACGATGAAGAGGAAGATGAACATGATGGGAGGAAGCTTATTGAGGATATGAAATGTGAGGAAGggattgatgatgatgaaacgGTCGAGGAGGAGGTCGTTGATGGTGAGGTGAATTATGAGAGTTTGATCGAACAAGTCGAATGCAGTACGAATTCATCTAGTTCCAGTTCGGAGAGTGAAGAGgaggatgatgatgatgaggaggaggaggatgaAGAAGTTGTGGTAAAAGaaggagaagaagaagaagtagaGGTAAAGACTGAAGAAATATGTATGAATGAAGGAATTCTTGAACAGGAGCTGGAAGTTGTTGGCGAAGAGTATGAGGAAGTTGTGTACGAACAGGAGGAAGACGTAGAGATGTACGAAGAAGTGGAAGAGGAAGTTGTGCAAATGCAACAAGACGATGAGGAGATAATAGATGAAATTATCATCAagcaagttgaagttgaacaaGAAGAAGATGACGATGATTCGGCAGAATATGAAGAAGATCAAGAAGTAGAAGCAGAAGGAGTTTATGAAGAAGAGGAGGAGGAGGCTGAACAAgatcatgatgatgatgaggatgatgatgatgaggatgaagaagatgaagaatcCCCCCAATCTGATGAAACGAATACTACTGAAGCAGATGGCGATGGGGAGAGAGATGATGAAGAGGCAGCAAACAATTTGGAAATGTCTTATGTACAGGATGCGGATGTTGTTGACTCCGCTGTCAAATCGATATGTTATGACGTTGACAGTTGCCATAGGAACGACTCGCCGCAAGAATACGAGGTGCAATCGCATAACAATTTGAATCAACACGAAATACAAAGTGCTGTTGACAGTATATTGTAA
Protein Sequence: MEADMEAINEQRQRLCLLCATITTHPNYVDIFIVDGLSHKIETCLPIQVRKSSELPDMLCLQCTDAIDAFYEFRRRSLETLAILEEKYQTNRSCFISRHKSPSINDKSTITDNLQAELTQFEEWKMKKLGQFHLEADSSATIQKSQQTIRDCALEISKAEELLSTTAIYTNKLVDYDSDDLADVEQNAKATTSFTNIRNKLYFDDSVNDIISEIVERKSTKRKLDVVVECDLQLMHKPKMFKLNETIQSLNRRKTRQPIKRRHLITSSQNSMISKQTQRADVVNLPQVCLLCDQQFAKGSALARHVFDTHGIDMAQVLSNEPVPEIIQRSLQVASALQTSNGLQLDDFDAKSPKSSPEKKAAKKLPELVKITDLKTKRESIETKHVENDAPPTLTASYVCPLCPASLTNKCDLYAHLRLRHSQHAKLICGLCLHIASSLGSLQEHVDICVKSHPTLGYFICQLCKYSDDNQKSLENHILVHDFLLGECKKDGKIFDPADYIETNILCDAKTYSCTECQTVLMNFKDFSSHRRSEHSIFHCDLCNKSYGRNSHLWKHVNRVHKGHPSVTCQFCYRTSASKYHLMQHFNKIHTQKSTSGAGGGGASGKVRNGDLNLFTTTPGDSDEDFMSKRFEGFDFQSVRQKFMRQELQGKDKAVQRRVEVIKDDKFTNVEDSVPPKELDSSSTIYTNIITNYTPPSNDGEFKCPKCSKAFHKRTLLKKHKKNCRPRLQKDLLTRCKSCSRIFKDRQSLAKHLVNYHSEYSCEMCAEKVQSKCEIVSHIRFTHPESRLVCVECGNVLRNNDLLRAHLADHNNSFVCQFCGDILPSKIKLKMHILSLHRKILSLSCGVCLKLFENQHILRDHVRLVHKEALQPLTSCTVCGKNYGSKWKTYDHLNKSHGRVFRACKSCLEVFNNEQELQIHFDIMHAKGVNKKVVTGSESVLPEKEPPIQVQIKEIIVEQNGPAAAAEQDEVQEESRSSHDSDGESSILEKHLRQQQQQQQPPPISRNNNASKINGGPAPVVPKTPKTTNKPPLSMSLPATPSVDTDALINSSKRTVYVNSNDPSVCDICHKNWPAKKHLWQHYIRCHKDVAATVCGICLCTNESYEELQRHLHREHPTLLHGKGFGSNFICRICGRYHNASSKLRLHMAIHTKFDWGLLEEQRNGPVVKEEVEDGEQHEEDDEEEDEHDGRKLIEDMKCEEGIDDDETVEEEVVDGEVNYESLIEQVECSTNSSSSSSESEEEDDDDEEEEDEEVVVKEGEEEEVEVKTEEICMNEGILEQELEVVGEEYEEVVYEQEEDVEMYEEVEEEVVQMQQDDEEIIDEIIIKQVEVEQEEDDDDSAEYEEDQEVEAEGVYEEEEEEAEQDHDDDEDDDDEDEEDEESPQSDETNTTEADGDGERDDEEAANNLEMSYVQDADVVDSAVKSICYDVDSCHRNDSPQEYEVQSHNNLNQHEIQSAVDSIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -