Basic Information

Insect: Liometoxenus newtonarum
Gene Symbol: L
Assembly: GCA_030264535.1
Location: JARJEB010028007.1:5291-10755[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.14 11 7.0 6.0 1 23 8 30 8 30 0.97

2 18 5.1e-06 0.00039 21.0 3.9 1 23 36 58 36 58 0.99

3 18 0.00095 0.074 13.9 1.3 1 23 64 86 64 86 0.97

4 18 0.0012 0.093 13.6 0.2 1 23 112 135 112 135 0.97

5 18 1.1 82 4.3 1.8 3 23 169 190 167 190 0.93

6 18 0.017 1.3 10.0 0.1 1 23 231 254 231 254 0.94

7 18 0.27 21 6.2 0.1 3 23 373 393 372 393 0.94

8 18 0.048 3.7 8.5 4.9 1 21 401 421 401 424 0.89

9 18 0.0019 0.15 12.9 1.2 1 23 429 452 429 452 0.93

10 18 0.00085 0.066 14.0 0.7 1 23 513 536 513 536 0.97

11 18 6.8 5.3e+02 1.7 0.2 1 9 582 590 582 590 0.91

12 18 0.0067 0.52 11.2 5.1 2 21 617 636 616 638 0.94

13 18 1.9e-05 0.0015 19.2 1.0 1 23 647 669 647 669 0.97

14 18 2.6 2e+02 3.1 2.7 2 23 677 698 677 698 0.96

15 18 0.038 3 8.8 0.2 1 23 808 830 808 830 0.91

16 18 0.077 6 7.9 0.2 2 23 839 860 838 860 0.95

17 18 0.00089 0.069 14.0 0.1 1 23 868 890 868 890 0.97

18 18 0.27 21 6.2 1.3 1 23 897 919 897 919 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.14	11	7.0	6.0	1	23	8	30	8	30	0.97
2	18	5.1e-06	0.00039	21.0	3.9	1	23	36	58	36	58	0.99
3	18	0.00095	0.074	13.9	1.3	1	23	64	86	64	86	0.97
4	18	0.0012	0.093	13.6	0.2	1	23	112	135	112	135	0.97
5	18	1.1	82	4.3	1.8	3	23	169	190	167	190	0.93
6	18	0.017	1.3	10.0	0.1	1	23	231	254	231	254	0.94
7	18	0.27	21	6.2	0.1	3	23	373	393	372	393	0.94
8	18	0.048	3.7	8.5	4.9	1	21	401	421	401	424	0.89
9	18	0.0019	0.15	12.9	1.2	1	23	429	452	429	452	0.93
10	18	0.00085	0.066	14.0	0.7	1	23	513	536	513	536	0.97
11	18	6.8	5.3e+02	1.7	0.2	1	9	582	590	582	590	0.91
12	18	0.0067	0.52	11.2	5.1	2	21	617	636	616	638	0.94
13	18	1.9e-05	0.0015	19.2	1.0	1	23	647	669	647	669	0.97
14	18	2.6	2e+02	3.1	2.7	2	23	677	698	677	698	0.96
15	18	0.038	3	8.8	0.2	1	23	808	830	808	830	0.91
16	18	0.077	6	7.9	0.2	2	23	839	860	838	860	0.95
17	18	0.00089	0.069	14.0	0.1	1	23	868	890	868	890	0.97
18	18	0.27	21	6.2	1.3	1	23	897	919	897	919	0.95

Sequence Information

Coding Sequence: ACTCATACagaacaattacaatttagtTGTCCGTATTGTCGGCGATTATTTAAGCATAAAAGATCAAGAGACCGCCACACGAAACTGCACACTGGTGATAAGAAGTACAAGTGCCTGCATTGTGATTCAGCGTTTGCCAGAAGtgatcatttaaaaattcacatGAAAACTCACGACAACAAAAAGCCACATCAATGCGATTTATGCAATCGTGGTTATAATACAGCGGCAGCATTGGCATCCCATCAACAACATCATTCGAAACAGGAACAGCGTCGATGTGGTAGCAGTGCCAGTCGAAGTAGTGCCGTGAGTACCCCTAGTCCTGGCAATTTTCGTTGTTCGCAATGTCCGGATACTTTCGATAAACCCGAAAGTTTGCAAAATCATTTATTAGTAAATCACAAAACGGTATCAGCATCACCAGTAGTTCCACAACCAACAAATTCAACTGATTCAAGCAATTTCATGCTAAAATCAGCGATTGATATTCCAAAAATTGCGTGCATGTATTGCGGCAAAGATTTTCTTAGTATGAATCACATGTACCAGCATATACATTCCGAACATCGAGCGATATTCAACAGTATTTCACAAAATATGAATTACACAGCGCCGTTACAGTCACCTGGTGGCGCGATCGAAGATTTATCTCCGAAACAACAAGCGCGCCCTAACAATTCTCCAACATATGCATGTGATCGATGCACGATGCGTTTCGATTCACCACTACTCTTACAGGATCACATCGAAAACGTTCACTGGGCACTGACTACCACCTACAAATACGATTTCGGCAAGGAATTTATAGAAAAGTCGCCGATTTCAAATGCGTCACAATCAAAGCCGACGGATTTGAGCAGGAAGAGACGCGCTGATAATGTAACAACCCTCGAATACAATAAATCCGAGAAACGTAAAGTCGATGAGCCCGTCAAACAAACATCGCCATCCACTGGCAGCCCCTACGAGTCCAATGATAAACCCTGTATTTGTTCATATTGTTACGCACAAATGCCaaactttaaaatgtttttactaCATATGGAGACACATGTTGCAATGAATACTGCTGCGCCTACAATTCCATTGccaacaaataatattattgcatGCTGTCCATTGTGTGGGGAGCCGGCAAGAAACGCTTTGGAGTTGGGCAGACATATTTTCGGACATGCCATTGCAAATGTGACCGCACATTGTTGTCACAGTTGTAAGAAGCCTTTCGATAAAGTGGATCAACTGCAAAAACATTTGGTAGATGTCCATTcacacactgtatataaatgtacaatttgtaaTGAGATATTCGATACGCAGTTAACACTTCAGATGCACTTCAGTAATAAGCATAGTCCGGAATGCAAACACTATCGCTGTAATTTATGTTCAGAACAAGTTTTCCACGACAGACTAACGGCTGAACTTCACGTAAATATGAAGCATAGTCTGCAAGCACCTCTCGGTGGAAATGCACGAAATTACCACTTGGCACGTTTCCCGGAGGTGGAGCAACGCGTCGATTTTCCGATCTACCAGTGCCCCTTCTGCCAGAAGATCTTCAAGGATGAATATCTTCAATATGTACATATTCTTAAAGAACACAACGAAACACGTGAAGGAGAAAACTACTTGTTAGATGCAGCATCAGCACTTCGCCAGATACCCGCTTCGTATGGAAAAGCCACATCCCCACCTGAGAAACTGAACAAACCCCTTGATATtaaaccaaacaacaattacagTTGCGAAATTTGCAACCGCTCGGATATTGCCAGCGATGCTGAACTAGCAGCCCACAAGAAGTTGCATCATGCCAAGTCGAAAGTGAGTACAGTTAGTTTACAATGCGCATATTGCAACGAACACTGTAAATCTCGATCCGACTTAGAAAATCACATGAAGTGTCACCAAGTGACTTGTGGTAAGGGTAAACATAAATGCAACATATGCGATGAAATATTCTCAAGCAACAGCACGCTTGCCGAACACAAATTGTCGCATTGTAAGATCGTTGCTGGTAATAGTTGCACGCAATGCAAAACACACCTTGTTGATGAACAATCCTTCTATAATCATCAATTACAGCACAGCAATCATGGCAATTCATCTACGGTTGGTAAATCGAACAATGCGCAAATATGTTTACCAGCGAACTGCATCATATGTTGTCAAACTCTTCAAACCGACGTCGAAATTAAACTTCATGCCAAATTTCACTTAAGACACCTGCTCCAAAAGGAATTTATTTGTGCCGTTTGTAACAAACTTTATGATGGTCTTAACGTATCGctgaaacaaatagaaaagaaCAATGCGTTGATATCAGTAAATATTTGTAAGGAATGTGAGGCACATACCTCATCGAACGGAAATACGTACACATCAATACTTCCGGAATTCAAAGAGAAAAACCTGTTTGCTTGTCTCAAGTGCTCGCAAACTTTTAACAATGAAGATGAAATACAAAATCACGCAGCTGATCATATGATGAATGAAGAACCAAATCTAGAATGTCATCTTTGCAGAAATATTTTACCAACGCCAAGCAAACTCCAAGTCCATTTAATTGAACATAATTTTATGGGAATGGGTCAGTATCGTTGTTATGTATGTTCTTCCGTATTTACGACTGCGGCAGGTTTGCGTAGTCATATAATTGGTCATGGATTGAATCATCGTCCGTATGAATGCATCGAttgcaaaatgaaattctACTTTGAGACTGAATTGGAAAATCATAAGTTTATGCATTTGCATATTAAAACTTATGCGAAAAATGGGTCGGAATTAACTTACGACAAGTACATCGAATGTAAACATTGTTTAGTTTCCGTACCGGAAGCGCTTTATTATTCCGAACACGTACTCACTTGTAGCAATAATGTAAACATCGGTaaagtaaaaactaataataccAGCAGTGCCGTCACACATAACTCATcagttaatattaaaattgaaaataaggaCGATTTCAATGACGACGCACAGGAAATTATGCTGCAGAAGAGTGAAATTAAATCTGaacaaagttaa
Protein Sequence: THTEQLQFSCPYCRRLFKHKRSRDRHTKLHTGDKKYKCLHCDSAFARSDHLKIHMKTHDNKKPHQCDLCNRGYNTAAALASHQQHHSKQEQRRCGSSASRSSAVSTPSPGNFRCSQCPDTFDKPESLQNHLLVNHKTVSASPVVPQPTNSTDSSNFMLKSAIDIPKIACMYCGKDFLSMNHMYQHIHSEHRAIFNSISQNMNYTAPLQSPGGAIEDLSPKQQARPNNSPTYACDRCTMRFDSPLLLQDHIENVHWALTTTYKYDFGKEFIEKSPISNASQSKPTDLSRKRRADNVTTLEYNKSEKRKVDEPVKQTSPSTGSPYESNDKPCICSYCYAQMPNFKMFLLHMETHVAMNTAAPTIPLPTNNIIACCPLCGEPARNALELGRHIFGHAIANVTAHCCHSCKKPFDKVDQLQKHLVDVHSHTVYKCTICNEIFDTQLTLQMHFSNKHSPECKHYRCNLCSEQVFHDRLTAELHVNMKHSLQAPLGGNARNYHLARFPEVEQRVDFPIYQCPFCQKIFKDEYLQYVHILKEHNETREGENYLLDAASALRQIPASYGKATSPPEKLNKPLDIKPNNNYSCEICNRSDIASDAELAAHKKLHHAKSKVSTVSLQCAYCNEHCKSRSDLENHMKCHQVTCGKGKHKCNICDEIFSSNSTLAEHKLSHCKIVAGNSCTQCKTHLVDEQSFYNHQLQHSNHGNSSTVGKSNNAQICLPANCIICCQTLQTDVEIKLHAKFHLRHLLQKEFICAVCNKLYDGLNVSLKQIEKNNALISVNICKECEAHTSSNGNTYTSILPEFKEKNLFACLKCSQTFNNEDEIQNHAADHMMNEEPNLECHLCRNILPTPSKLQVHLIEHNFMGMGQYRCYVCSSVFTTAAGLRSHIIGHGLNHRPYECIDCKMKFYFETELENHKFMHLHIKTYAKNGSELTYDKYIECKHCLVSVPEALYYSEHVLTCSNNVNIGKVKTNNTSSAVTHNSSVNIKIENKDDFNDDAQEIMLQKSEIKSEQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -