Basic Information

Insect: Liometoxenus newtonarum
Gene Symbol: -
Assembly: GCA_030264535.1
Location: JARJEB010030417.1:7253-18413[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0006 0.047 14.5 0.3 1 21 289 309 289 310 0.94

2 26 0.33 26 5.9 3.0 1 23 316 338 316 338 0.95

3 26 1.8 1.4e+02 3.6 1.1 1 21 532 552 532 553 0.94

4 26 0.029 2.2 9.2 0.5 2 23 560 582 560 582 0.95

5 26 0.027 2.1 9.3 1.5 3 23 588 608 587 608 0.97

6 26 0.011 0.85 10.6 4.1 1 23 614 637 614 637 0.96

7 26 4.9e-06 0.00038 21.1 2.3 1 23 642 664 642 664 0.98

8 26 0.0094 0.73 10.7 0.9 1 23 730 753 730 753 0.92

9 26 0.026 2.1 9.3 0.7 1 23 813 836 813 836 0.95

10 26 0.0045 0.35 11.8 2.7 1 23 839 862 839 862 0.93

11 26 0.21 16 6.5 0.8 2 21 870 889 869 892 0.88

12 26 0.88 69 4.5 0.2 2 23 895 916 894 917 0.93

13 26 0.0028 0.22 12.4 0.1 3 23 925 945 923 945 0.96

14 26 0.012 0.95 10.4 0.3 1 23 982 1005 982 1005 0.98

15 26 1.6e-05 0.0013 19.4 0.6 2 23 1678 1702 1677 1702 0.94

16 26 0.00026 0.02 15.7 0.6 2 23 1708 1729 1707 1729 0.97

17 26 0.0019 0.15 12.9 0.3 1 23 1735 1757 1735 1757 0.98

18 26 0.00081 0.063 14.1 3.5 1 23 1763 1786 1763 1786 0.95

19 26 0.0012 0.093 13.6 0.4 1 23 1791 1813 1791 1813 0.98

20 26 3.6e-05 0.0028 18.4 2.1 1 23 1821 1843 1821 1843 0.98

21 26 0.0065 0.51 11.3 2.2 1 23 1848 1870 1848 1870 0.98

22 26 0.00081 0.063 14.1 0.1 1 23 1876 1899 1876 1899 0.97

23 26 0.00039 0.031 15.1 0.3 2 23 1905 1926 1904 1926 0.97

24 26 0.0029 0.23 12.3 0.3 1 23 1933 1956 1933 1956 0.97

25 26 0.048 3.7 8.5 1.0 1 23 1980 2002 1980 2002 0.98

26 26 0.2 15 6.6 0.1 1 20 2020 2039 2020 2042 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0006	0.047	14.5	0.3	1	21	289	309	289	310	0.94
2	26	0.33	26	5.9	3.0	1	23	316	338	316	338	0.95
3	26	1.8	1.4e+02	3.6	1.1	1	21	532	552	532	553	0.94
4	26	0.029	2.2	9.2	0.5	2	23	560	582	560	582	0.95
5	26	0.027	2.1	9.3	1.5	3	23	588	608	587	608	0.97
6	26	0.011	0.85	10.6	4.1	1	23	614	637	614	637	0.96
7	26	4.9e-06	0.00038	21.1	2.3	1	23	642	664	642	664	0.98
8	26	0.0094	0.73	10.7	0.9	1	23	730	753	730	753	0.92
9	26	0.026	2.1	9.3	0.7	1	23	813	836	813	836	0.95
10	26	0.0045	0.35	11.8	2.7	1	23	839	862	839	862	0.93
11	26	0.21	16	6.5	0.8	2	21	870	889	869	892	0.88
12	26	0.88	69	4.5	0.2	2	23	895	916	894	917	0.93
13	26	0.0028	0.22	12.4	0.1	3	23	925	945	923	945	0.96
14	26	0.012	0.95	10.4	0.3	1	23	982	1005	982	1005	0.98
15	26	1.6e-05	0.0013	19.4	0.6	2	23	1678	1702	1677	1702	0.94
16	26	0.00026	0.02	15.7	0.6	2	23	1708	1729	1707	1729	0.97
17	26	0.0019	0.15	12.9	0.3	1	23	1735	1757	1735	1757	0.98
18	26	0.00081	0.063	14.1	3.5	1	23	1763	1786	1763	1786	0.95
19	26	0.0012	0.093	13.6	0.4	1	23	1791	1813	1791	1813	0.98
20	26	3.6e-05	0.0028	18.4	2.1	1	23	1821	1843	1821	1843	0.98
21	26	0.0065	0.51	11.3	2.2	1	23	1848	1870	1848	1870	0.98
22	26	0.00081	0.063	14.1	0.1	1	23	1876	1899	1876	1899	0.97
23	26	0.00039	0.031	15.1	0.3	2	23	1905	1926	1904	1926	0.97
24	26	0.0029	0.23	12.3	0.3	1	23	1933	1956	1933	1956	0.97
25	26	0.048	3.7	8.5	1.0	1	23	1980	2002	1980	2002	0.98
26	26	0.2	15	6.6	0.1	1	20	2020	2039	2020	2042	0.95

Sequence Information

Coding Sequence: ATGGCAAGTTTTTCGGATGTAATGCAGATGTGCCGATTATGTTTAGTCAAAGACCAAGTGAATTTGCCAATTTTCGGTGGGCAAGGCGACTTGCAACAAATATTCCTCAAAATTACGGCGTGTCTGCCGGTTAAGGTCTCTCGGGAAGACAATTTACCCAAAAATATATGTGATGGTTGCTCCTACAAGTTAGACATGTTGTATCAATTCTGGAATACATCATCCAACTCGGAAAAGCAACTTATTGATTGGCTGAATGCAGCTGGTGTTGATCCTAAGCACAAATCGTTGGAGACACCACTTGGCATTACCACTCAACCCAATGTGATTCTCAAACAGGAGCCCGTTACTGAACTCGATTCCATTTCTTCTGATACCCAAAACTATATtatgcaacaacaacaattggCCTACAAACCTGAAGAATTCGTCGACAGCTTCAAGGAGTCGCAGGCTACcgcaaaaagtacaaaaaagaAAGCCGCTGAACCTGCTGAAGAGGCGCCATCCAAGCGGCCTAGACGTGCAACCCGCAGCACTAGGTCGGTCGTAGAAGACgaggaagaagaagatgaCTTCCTGGACAATGTCGACTCTGGCATCACAAAGACTGAAGATGATAGTGATGAGGATGACGACGATGGAGACGACGACGGAGGAATGCCCGATGCTGACCCTGATTTTGAAACCCTTGACGAAGACGCTGATGCCGACGCAGATGCCGATGCTGATCAACCTGGACCTTCCGGTGTTAGTGGAAGTAAAGCATCTACTGGACCATGCatagatgaagatgaagattaCAATCAAGACGAAGGCGAGATCGAAGAAATATTGATTGAGACTGAGGTTGCCGAACATAATTTTCAATGTGAAGTGTGTGGATTAATCTTTAGCGATCGCAGTCAATATTTAGAACATCACATGTCTCAATTCGGATCTAGATTTTCGTGCTGTCGTTGCGGtgattcatttaaaaatacaactgAACTTTATCAGCATTACGAAGCGCATAGATTAGAACCGGATACCGAGTACATTGTTGGAGATGCTATGGCGGGCACCGACGATGTTGAAGTTGAATCAGATACAGTCATCTACGACGAGGAACAAGTTGAAGCCGTTATCAATATACCGGGAGAAAGGGCCATGAGTTCAACACAGGAGTTATTGTATATCTTAGACGACGATAATCAATGCATTAATGAAGTGGTTATAGAGACCGCTGAACAAAATGCAAATCGCAAAGCCGCACAAGCTTCAATAACGAGCAAGAAAGCTGATTATTCTGTGGTGCAAGTTGATCATGGATATATTATACCTTCCTGTTTTCGCGGGCAACTTGATGCGAAGAAACGCGTCAAGAAGATGCAACCCACTACTTATATCCAAATTGCTGATCACGACGAAGAAGATAACGAAATCATCGAAATGACTCCAACGACGAGTACTGTAGTATATACGGAAGGCGGCCAAGAAGATTCTTCACCAAAATATAAAGTTCCTCAAGCACGAAGACGCCATGAACTACCCGACTTCTCAGCGACAAGCTACGAAATTTTAAATCCAAACGACGAAGTCGAAATTGTTCATTTCAAATGCCTGCGTTGCGAACaactatttattaataagtttGTGTTTTTCCGACACATTGAAAAAGGAAAGTGTTACATTAATAGTTGCGACGTTTGCACGGCGACATTCTCGAAAAATACGGATTTTTATAATCACTATGTGACTGCGCACACTGAACGAGCCatttgtaacttttgttttagaACGTTTATGTATGAAAAGAATGTTAAGGAACACATGTTGCGACATTTGGATCAGTTTAGGCATCGTTGCGAAGAGTGCAACAAAGGATTTTATACAGTTCGCGAATATCGAAATCATTACAAGAACAGGCATATGGGAATTAGACACAAATGTACCGAATGTGGACGGTCGTTTGCtgatgaatattattttaagaaaCATATTGCTACTCACGGATTAAAGTTAGAATTAGTAGTATCAATGGGATTGGACAATTATCCAAAGTTAAAAAGCGCATATGGACTTAAAGATTGTATTGTCTTCGTTGGCGAAGCGAGCGAATTTGATAACGAACAATTTCGATTTATGAGAACTCAGTCCTACTGCGACGTTGACAAAACGAATATTCTCGTGGCCCCAagattaaaatacaaatgcgATGAATGTCCGGCTAAATTTCGTGATCATTATCGACTCATTCTACATAAAGAAGAAATCCATGTGAACCATACCTTTCCAACAGAGGAAATCTTTGACGTGGACGATGACTCTGCGAAAATGGTTGCGGATAGAAATGCTATAACCTTGACATCGTTACTCCAGTCGGAGCCTCCTACTCCTAGAGATGCTAACAGTACTGATGTACCATCTTCATCTACAACCAGTGACAGTAAGAGACATCGTTGCACGAAATGTGTTCAAAGATTTGCTTTGAAAGGTGAACTCGCAATGCACTTGAAAGAAGTGCATAATGTGTTTTCTTGCAAATTGTGTCCGCAAACCTTCTTCTCGAAGAACAACATGGAGGTGCACATGGTGCACAAACATCAGAGCAACAATGGCAAGTGGAAATGTAAATCTTGTCAGCTATCATTTGGACATTATGACGATTTGATCGAACATAATCTGGATACGCATAAACTTGTCTGTGGATTATGCAAGAATGATTTTCCAAATATTCCAGCATTGATGACGCACAAAAATATTCACCATGGTGTACCATTGGAGATAATTTGCGACATTTGTGGACTTACAACCAATACTAGCGTTGAGCTTGGACAGCATATGAAGCTTCATGTTTCTGAGGCAATCAACTGTGATCTATGCAATGAGGTACTTCACGGTGAGGAAGTTTATGCGAATCATGTAATGATGAAGCATGTTGGACCTAATACCAAGAAACTATTTAAGTGCACGGTATGTAAGTTGCTTTTCGAAAGCAAGCCCGCTATCTACGACCATATGAGAACTGCCCATTCCATGGAATACgaagaaagaatgaaaaaaaagccGAAAACTGTTCCGCCCTCACctgaaatattaaatcataCTCTATGTAAACAATTTCCAAGTAACGTAAGCAGCGTTCCAAGCTTGAAAATTAAGCTTGTGAAGCAGCCACCTGTTCAACCTGTGACAAATATTCCGGCAACTAATGAATCTCATTATGTTATTTCCAAACAAAGTACTTCAAGTCAGCATTCTCAACAATCCCAGAAAGCTAAAGTTAAGTCCATTGCCACGCCAGTTACAAAGAATCCAATTACAAATTCGGTCAAAGTTTGTACAACTACCACCACTTCAAAACCTGACGTTGGCCTAGCTGGACCTTCTTCATTGCAGACTAGCATTGAACAAGGATCCATGGTTCCTCAACTTGTTCAATTGCCGCAAATGATGACAAGTAATAAGCCAGAATCCAAATTGTTAGTAAtagacaaaaataaacaagcatACCTATTGCCCGCTTATATGGTGAATCAGAATGGTCAAATGAAAATTGCGTTTAAGGGTGGTTCCCTACCGGAAACATCTTTAAGTGAACAATTTACTGTACCTCCAATGAATACCAGTATTTCGCAAACATTTGTAACACCCAGTAACCCTACTActatcaatataaataataccaTTTGCACTACAAATATTGTACGAAGTGCACGTGCCCCTTTGCCCAAGATGCAACCTTCTGTTGCAAAGCAGTCACCTGATAAAAACACGGATGCAAATCCGCCTCCCCTTGTTCTGCGGCAATATAAAGCTAAGAAGACCTCTTACCATGACTTTAAGGGTAAATTCGATAACTTGGTAGATAGAATGCCTAGTCCACATTCCCATAAACCAAGTCCTAAGGATAAAGGTGAAGCTAACGCCAACGCCGATGCTGATGCTGAAAAGCAGCCACCCATTCATTTAGAAAAGTCCCAAGCTGCTGTAGATGATGCAGAACTTAACCTTGCCgttgcaaatattattttggaTGATATTGTGGAACCGGAAGAACCTGATATACAAATTGTTGGAGATTCGCTGGGATCCACTTATGATCAAATGTCCTCTGTAAATGAAAACTTACGAGAAATATCAGAAATTGAGAAACGATCTGAAAAAGTAACATCCATGGAGGATAAGACTTCAGAACCAGAACGTGTTCATATTGACGAGTCGCTCATGAACATGCAGGCCCCAAATGCGGGGCATTGTATACCAAAAATCTTTTTAAAGCCTTTAAGTCAACTTCTGGAAATGCCAAAGCATGATGATCCAATTGCAGCACCTTCCACAACTCCAAGCACTACTCCACAACTGATGAAGATTTCGCCGGATAAAGTACCAGTGTTCATAAGACAGATAAACGAAAAACTAACTCGTGATGATCTAGGAATGTCTTCAAGTCCGTTTGAAAGAACAACATTGATGAACCCTTTAGATCCAGCGGTTCCAAGTACGTCCAACATTAATACTTCGGCAATCATGAACATTACAGCTGATAAAGTACCAGAATATAAAAGAAAGGTTAGTGAAAAGTTGAGAGGTGCTGAAGGCCTTGATAATGCATTGATTTGTGACAGTCTTAACTTGCAGAATGCAATACAGATAGCTAATCCAAATTTGGAGGCTTCGTCAAAAACGGGAGATGCGGGATCGTCAGAAACGGGAGGAGATGTGGTATTGGCGAAAAAAGAATATAAgAATCCTAGCGCTGACAATGACGACGATACAGTCACAATTGAAACGACTAGTGGACCAAAACGCGTACCGAAGAAATATGTTGTATTTGCACCGAAACTGCAAGAAAAAGTGACTATACAAACGAAAGATGGACGCTCTATTCCGTTAGTTTTAAAATCATTGCCCATTGTGTTTAAGAAGAATATGTTTGAAGGTCTTGACACACAAAAAACagtgaaattgcaaaaaatccCTGACGCTGAGATGGCAGAGGatgatgattttgaaattcaaatgaaagcTAACGTTAAAACTGGACTTGTTTGTCCAGTAGCTGATTGTGGTAAACGTTTCTATCATCAAGATAAGTTAACTAGGCATATTGACCGATCACATGTCGAACGCGACTTGAAGTGTCCTATTTGTGATGTAAAGTTTAAATATCAGAATTCCTATCTGTCCCATTTGAAGGTCCACGAGGTGGATAAGAAGTACAATTGCCAAATCTGTGGTAGGAAGATTAGTTCACGTCGGGTGTTGGAAGTCCACGTTCGTAGGCACACGGGGGAATACCAACACAAATGCGAAGATTGTGGCAAGGAGTTTTACAATGATTTCTCATATAATCATCACATGCAGGCCGAACATGAGGGTATAAGGTATCCTTGTGAAATTTGTGGTTCTGTGCTGAAGAGCAAGCGTTATTATAAAGATCATATGAGTATGCATAGCAAGAAAGATGCAATGACTTACGAGTGTGATGTGTGCCATAAGTTTTACAGTACTAAGAGTGCCCTGAATGGTCACAAGCGGATTCATACAGGGGAACGGTACATTTGTCATATTTGTGGCAAGAAATCTATTCAGAAAGGCGCACACAATGTTCACATGAAGATGCATTCCGGAGAGAAGTCATTTATCTGTGAATGGTGTGGCAAGGATTTCTTGAGGAAAGACGTCCTTGCAACACATATGCGACGAGCACACGAAGTGGGGCAGATTCCATGCGAGAAATGTGATGAAATGTTCGGCACTGAATACCAATTGATGGTACATTTGCATACACATAATGACATTGAAAAACCATTCCCTTGTCAGTTGTGTGATGAAAAGTTTATTGATTTGAACTTTTTACGCAGTCACGTTAACAAAGTGCATATCGCAAATAGTTCAAAATCGAAACCAACACCGAAATTAAAGCGAAGGACGATTAAAGGCAAACATGCATATGTTTGTTATATTTGTGACGCCACTTGTCCAACTACAGCTTTAATGCGAGAACACTTTAAAACTCATGACATTTCGGAGGATGAAGAGGATGAGATCGTATCGAAAATTGAAGAGGAGTATAAATGCAGCTACTGTGAGGACGTCTTTGATAATATTCCTGATTTGAATACACATTTACCGGAACATGCTGAGCATGTTCAATTTGAAGGCGCGGACGTCATGTTTCTCTATGAAGATTGTCAAGAGGAAGTGGTTGTTGCTAATATATAA
Protein Sequence: MASFSDVMQMCRLCLVKDQVNLPIFGGQGDLQQIFLKITACLPVKVSREDNLPKNICDGCSYKLDMLYQFWNTSSNSEKQLIDWLNAAGVDPKHKSLETPLGITTQPNVILKQEPVTELDSISSDTQNYIMQQQQLAYKPEEFVDSFKESQATAKSTKKKAAEPAEEAPSKRPRRATRSTRSVVEDEEEEDDFLDNVDSGITKTEDDSDEDDDDGDDDGGMPDADPDFETLDEDADADADADADQPGPSGVSGSKASTGPCIDEDEDYNQDEGEIEEILIETEVAEHNFQCEVCGLIFSDRSQYLEHHMSQFGSRFSCCRCGDSFKNTTELYQHYEAHRLEPDTEYIVGDAMAGTDDVEVESDTVIYDEEQVEAVINIPGERAMSSTQELLYILDDDNQCINEVVIETAEQNANRKAAQASITSKKADYSVVQVDHGYIIPSCFRGQLDAKKRVKKMQPTTYIQIADHDEEDNEIIEMTPTTSTVVYTEGGQEDSSPKYKVPQARRRHELPDFSATSYEILNPNDEVEIVHFKCLRCEQLFINKFVFFRHIEKGKCYINSCDVCTATFSKNTDFYNHYVTAHTERAICNFCFRTFMYEKNVKEHMLRHLDQFRHRCEECNKGFYTVREYRNHYKNRHMGIRHKCTECGRSFADEYYFKKHIATHGLKLELVVSMGLDNYPKLKSAYGLKDCIVFVGEASEFDNEQFRFMRTQSYCDVDKTNILVAPRLKYKCDECPAKFRDHYRLILHKEEIHVNHTFPTEEIFDVDDDSAKMVADRNAITLTSLLQSEPPTPRDANSTDVPSSSTTSDSKRHRCTKCVQRFALKGELAMHLKEVHNVFSCKLCPQTFFSKNNMEVHMVHKHQSNNGKWKCKSCQLSFGHYDDLIEHNLDTHKLVCGLCKNDFPNIPALMTHKNIHHGVPLEIICDICGLTTNTSVELGQHMKLHVSEAINCDLCNEVLHGEEVYANHVMMKHVGPNTKKLFKCTVCKLLFESKPAIYDHMRTAHSMEYEERMKKKPKTVPPSPEILNHTLCKQFPSNVSSVPSLKIKLVKQPPVQPVTNIPATNESHYVISKQSTSSQHSQQSQKAKVKSIATPVTKNPITNSVKVCTTTTTSKPDVGLAGPSSLQTSIEQGSMVPQLVQLPQMMTSNKPESKLLVIDKNKQAYLLPAYMVNQNGQMKIAFKGGSLPETSLSEQFTVPPMNTSISQTFVTPSNPTTININNTICTTNIVRSARAPLPKMQPSVAKQSPDKNTDANPPPLVLRQYKAKKTSYHDFKGKFDNLVDRMPSPHSHKPSPKDKGEANANADADAEKQPPIHLEKSQAAVDDAELNLAVANIILDDIVEPEEPDIQIVGDSLGSTYDQMSSVNENLREISEIEKRSEKVTSMEDKTSEPERVHIDESLMNMQAPNAGHCIPKIFLKPLSQLLEMPKHDDPIAAPSTTPSTTPQLMKISPDKVPVFIRQINEKLTRDDLGMSSSPFERTTLMNPLDPAVPSTSNINTSAIMNITADKVPEYKRKVSEKLRGAEGLDNALICDSLNLQNAIQIANPNLEASSKTGDAGSSETGGDVVLAKKEYKNPSADNDDDTVTIETTSGPKRVPKKYVVFAPKLQEKVTIQTKDGRSIPLVLKSLPIVFKKNMFEGLDTQKTVKLQKIPDAEMAEDDDFEIQMKANVKTGLVCPVADCGKRFYHQDKLTRHIDRSHVERDLKCPICDVKFKYQNSYLSHLKVHEVDKKYNCQICGRKISSRRVLEVHVRRHTGEYQHKCEDCGKEFYNDFSYNHHMQAEHEGIRYPCEICGSVLKSKRYYKDHMSMHSKKDAMTYECDVCHKFYSTKSALNGHKRIHTGERYICHICGKKSIQKGAHNVHMKMHSGEKSFICEWCGKDFLRKDVLATHMRRAHEVGQIPCEKCDEMFGTEYQLMVHLHTHNDIEKPFPCQLCDEKFIDLNFLRSHVNKVHIANSSKSKPTPKLKRRTIKGKHAYVCYICDATCPTTALMREHFKTHDISEDEEDEIVSKIEEEYKCSYCEDVFDNIPDLNTHLPEHAEHVQFEGADVMFLYEDCQEEVVVANI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -