Basic Information

Insect: Liometoxenus newtonarum
Gene Symbol: su(Hw)
Assembly: GCA_030264535.1
Location: JARJEB010021365.1:1-3928[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.4e-06 0.00011 22.7 0.9 3 23 107 128 106 128 0.96

2 13 0.00067 0.052 14.4 0.3 2 21 161 180 160 183 0.89

3 13 0.00052 0.04 14.7 4.8 1 23 190 212 190 212 0.98

4 13 0.00064 0.049 14.4 1.3 1 20 218 237 218 239 0.94

5 13 1.8e-07 1.4e-05 25.6 1.2 1 23 250 272 250 272 0.98

6 13 3.8e-06 0.00029 21.4 0.1 1 23 282 304 282 304 0.98

7 13 8e-06 0.00062 20.4 0.4 1 23 310 332 310 332 0.98

8 13 2.3e-05 0.0018 19.0 1.6 1 23 338 360 338 360 0.99

9 13 3.4e-06 0.00026 21.6 2.4 1 23 366 388 366 388 0.95

10 13 3e-05 0.0024 18.6 2.7 1 23 394 417 394 417 0.95

11 13 2.8e-05 0.0022 18.7 0.5 2 23 424 445 423 445 0.93

12 13 4.9e-07 3.8e-05 24.2 1.8 1 23 451 473 451 473 0.99

13 13 4.1e-06 0.00032 21.3 3.9 2 23 480 502 479 502 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.4e-06	0.00011	22.7	0.9	3	23	107	128	106	128	0.96
2	13	0.00067	0.052	14.4	0.3	2	21	161	180	160	183	0.89
3	13	0.00052	0.04	14.7	4.8	1	23	190	212	190	212	0.98
4	13	0.00064	0.049	14.4	1.3	1	20	218	237	218	239	0.94
5	13	1.8e-07	1.4e-05	25.6	1.2	1	23	250	272	250	272	0.98
6	13	3.8e-06	0.00029	21.4	0.1	1	23	282	304	282	304	0.98
7	13	8e-06	0.00062	20.4	0.4	1	23	310	332	310	332	0.98
8	13	2.3e-05	0.0018	19.0	1.6	1	23	338	360	338	360	0.99
9	13	3.4e-06	0.00026	21.6	2.4	1	23	366	388	366	388	0.95
10	13	3e-05	0.0024	18.6	2.7	1	23	394	417	394	417	0.95
11	13	2.8e-05	0.0022	18.7	0.5	2	23	424	445	423	445	0.93
12	13	4.9e-07	3.8e-05	24.2	1.8	1	23	451	473	451	473	0.99
13	13	4.1e-06	0.00032	21.3	3.9	2	23	480	502	479	502	0.95

Sequence Information

Coding Sequence: GAATATGTAACAGAAGATGGTACGCAAAAAATCATTATAACTGAAGGAGGCCAGGCTTATATCAGTGAAGATGGTGAAGAGGGCGCCATTTATGTACAAGAGCAGGAAGAATTTGATGGTAACTACAAAACAGAATACACCATTGCGTCTGAAGACGAGGAAGAAGAGTATGAGGATCAACAATATGTGGCTGAGCCAATGGAAGATACTGAAGATAATTGCAGTCAGGCTGTCTATGACAACGAAGCAGATCCAGATGATCCTGATTATTTAGCAGACGAGGAGAAAGTTGAAGAAGACAACCctgatttgaatatttgtacTATTTGTAATAGAACATTTAAAACCTCTGCTAGTTTGAAGCGTCACATATCAGTTACGCATAATCCTGATAATGAGGATGCCAATGATCCATTGGCGTTTGAAGTTTGCGGTTGTTGTGGAGAACCTTCTGATTCTGCACATGCAAGTGGCAGtattaaatgcaaaatgtGCGACAAACTTTTTGTTATGCAAACAAACTTGATTCGACACAATGCACTCGAACATCCTGATGACAACGGAATGCATCGCTGCTGTGAGTGTTCACGTTCGTTTAACTCAAAGTCGGGGATTCAAATTCACATGCAATCCCATCCATTGGCTAAACCATTTTCATGTAAAGCATGCAATCGCGACTTTACGCGCAAATATCATTTGGACCGGCATGTGGCTCAAACCGGATGCGATGGACAACCAcgcaatcaattcaaatgtCAAGTTTGCAACAAAAGTTTTGGACGCAAAGATAATTTGCGAGATCATTTACGAGCACACGCCGgacaaattaaaaagaagaagacATTTCCATGTCCTCATTGCGGTAAAGTGTTTCAAGGGCAAGCTTTATTAGTTGTACATGAGAGAACACACACTGGTGAAAAACCGTATGCTTGCGATTTATGTCCGAAGAAGTTTCCTTCCAGTGGGGCTATGAAGAAACATAGACGGATGCATACTGGAGAGAAACCTTATCAGTGTATGCagtgcAAAAGAAGATTCGCAGCAAAAGAAACATTAAATCGTCATGTTCGGACGCACACAGGTCTCAAGCCACACAGTTGCTCATATTGCGGCAAATCATTTATTCAGGCAGCGCAATTACGAGCCCACATTTTCCACCATACGGGTGAAAATGCTTTTACCTGCCCGCACTGCAATCGGGCTTTCAATCGCCGAGTACGTTTAACAactcatattaaatttgtgcaTGAAGGTGCTCAACCCTTAGAGTGCAAAGAATGCGAAAAAACATTCTTTCGAAAGGAAGATTTAATTAGACATGGCCTACTACATTCCGGCGAAAAACCCTTTCAATGTGAGCACTGTGATAAACGATTTGCAGTCAAAGCGTCATTAAAACTTCACATGTTAACGCATCGGAAAGAGCATCCATGTTCCTGCGACGAATGTGGACGAGCATTCATTCGTCAAGATTGTTTGTTGCGTCATATGCGATCAAAACATCGCGATGTGCTCGAAGATATTATGGCTGCTGCAGAAAAGAAACGTTTACATGAGCAGCTCCTCACAGCAACATCTGCAGATTCCAGCAATCTGAAGAAGGAAATAATGGAATCGCAAATTTGGAATGAACTAACATTGACCGATTCGATTAAAGAGTTATTAAGTTTACTTGTTGATGAGAACACTTTAAAAGCATTTGGATGGCCTGATGCGCCAGTTGATAAAATACTTGATTCAGTTATTAAGCGCTGTGGACATGAGCCAGCATCAAATGCTGATTTTGATTATATCGGTAGAATGCGTGAGAATGCCAAGTTACTTTTTACTGTTGTTATTGACGATCAAGCTGTTAAGTCGTTGTTGAATAATCAGACTGTTGATGAAGTTATTCAACACGTCTTGCGTCTTGCTAAAGATGAAGGtgaagatgaagatgattCAGATGCTGAACAAGATGATCC
Protein Sequence: EYVTEDGTQKIIITEGGQAYISEDGEEGAIYVQEQEEFDGNYKTEYTIASEDEEEEYEDQQYVAEPMEDTEDNCSQAVYDNEADPDDPDYLADEEKVEEDNPDLNICTICNRTFKTSASLKRHISVTHNPDNEDANDPLAFEVCGCCGEPSDSAHASGSIKCKMCDKLFVMQTNLIRHNALEHPDDNGMHRCCECSRSFNSKSGIQIHMQSHPLAKPFSCKACNRDFTRKYHLDRHVAQTGCDGQPRNQFKCQVCNKSFGRKDNLRDHLRAHAGQIKKKKTFPCPHCGKVFQGQALLVVHERTHTGEKPYACDLCPKKFPSSGAMKKHRRMHTGEKPYQCMQCKRRFAAKETLNRHVRTHTGLKPHSCSYCGKSFIQAAQLRAHIFHHTGENAFTCPHCNRAFNRRVRLTTHIKFVHEGAQPLECKECEKTFFRKEDLIRHGLLHSGEKPFQCEHCDKRFAVKASLKLHMLTHRKEHPCSCDECGRAFIRQDCLLRHMRSKHRDVLEDIMAAAEKKRLHEQLLTATSADSSNLKKEIMESQIWNELTLTDSIKELLSLLVDENTLKAFGWPDAPVDKILDSVIKRCGHEPASNADFDYIGRMRENAKLLFTVVIDDQAVKSLLNNQTVDEVIQHVLRLAKDEGEDEDDSDAEQDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -