Basic Information

Gene Symbol
Trerf1_1
Assembly
GCA_030264535.1
Location
JARJEB010005461.1:1-7224[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3e-11 3.9e-08 33.6 0.1 2 46 885 929 884 929 0.97

Sequence Information

Coding Sequence
TCACAACAAAATGCATCAACTAAAGGAAATGCTTCCAATTCAAGTGCACAAAATAAAGTATCAAGTAGTGGCTCATCAGTTCCGAACGCTGGCTCGTCCAATTCTAATACATCTTCATCAAATGCGACAAATAAAACGGAACCAAAACCAGTGGAATGTAATTTGTGCcatagaaaattcaaaaacatacCTGCCCTCAATGGGCATATGCGATTACATGGAGGATACTTTAAAAAGGACGCGGACAATAAAAAAAGCGAGAAAAAAGACACGACGGGACCACCATTGCAAACAGCCAGTGTGAGCGTACGCGCTCTCATCGAAGAGAAAATCATTAATAAACGTATCACCAACACTCCGACGACGACGGCCAcggcgacgacgacgacgatacAAAACGAGGACGTGGGACGTAACACAAACGCACCGCCACTGTTTCCTTTAACCGTGCATTCCACAACAACGAACACTAGCGATTTGGATAGTAAAATAACATCGTTTGTGGTACCTGCGCCTCCGCAACAACTTACAACGGAAAAATCGCGACGGCATTCTGATGCTGAAGCATTTACGATGCCCCGTACGCCAAACGGCACTGCAACACAGCAGGAAGCCGAAGCGCTAGCAGATTTGATATTAAAACGTGAAAAGGCTACTGTCAAACGCACAGTTTCCGATCCAGGCCAACAACAATCTCAAGCATCCCCTCAACAACCATCACAGCATCAACAGGCATCGCAaatcattcaatttcaatcgGGTGCCGACTCATTCACACTTGCTTATCAGTCCGAGGATGGTGGTTACTTATCACCAAGCTTACAAGATGAGGTATTTACGCAAGTTCCTGACAGCATGCTGTTGCAAGGAGTTGACGCTCAACAATTGGCATCGATTCAATTTCAAACTGATTCGTTGCTCCAAGATCAAAGCGATCATCAACTGCTAGAGGATTACACGAATCTCCAGGACACTGTTGTACAATCTCCGTCGTATCAGTCTAGTCATTCGGTGAATCAGGAATTGCAGGCAGTTCTCGACTCGCCGCTGCCAGAAAGCCTTGCTGAATTCAGTACCTATCATTCGACCGGAAACTTGGATATGTCGTCGCCCGGTTACCAAACTCAATCGCCCGTTCAATATTCCTCGCAATCACCACACGCGACTTTGGCTGCTCATTCTCCTTTACAATCACCACTTATTAGACATGATTCTCCTGGATTTGCTTATCCGACACCGCCAGCTAGTCATGAAGGTTTGTCGCCCTGTTTCGGACAGAATTCAATGTTGCCAATGGTTTCGCCTAAGCAAAATGATTTTGGTCAAATGGTTTCACGGGATTTAGACGATCCTCAACAACCATCATCGCCTTTGACTGCGGCGTTCTTTACGTCGACCATGTCGAGTTCAGCTGCCGTTGAGGAAGCACTTGAAGAAGTTTTACCAGGGGAAAGTATAGCGGGTGACGAATTGTATCCGTCGTTGACTAATTCACCGCCACCGCCGCAGTCACAGTCGCCTTTGTCAGTCGGTCTCACACCGGTAGCATCTCCCTTATCTAACATCCCCACGAGTTCTACACCAGCGTCATCAGCACATCCGACTTTCACGCAGAACACTGTGACCTACCCGATGTCACCGCATTTCACATTACAATCCCAAATGATGCCTAACTCTGATGATCCTTTGTTATCCAGTAGCCCCAAGGACTTTGTTCCGCGTAAAAAGTTTGAATTCAACGGTCTACCACTGAAAGTCATAAGTAGTAATGGCTTGCTTGATTTGAACAATGCTAATTTGACGGGCATTCTTGTCGAAAGCAATGGggaaatcaaatttattcagaCTGGTGGCACCGGATTTCAAACGAAAAACATTTTGGTGACGGGTACGCCTATTCTTGCAACAACTACAACACAGCAACAACCTCCAAATATCACAATCAAAGAAGAACCGGGGGTTCAATCAAAGAATTTATTAGTGCAGAAGATTACTAAGGCGAAAGCAATTTCGTTGAAAGCTAAGGATATTAAACAGGAAGATATTAGTCATGACGTCTTTTTAAGTCCAAcaaaTGTGACTCCAAGTCCAGTGAGATTATCAAGAAAACGAACGAGAACTGAACCATTACAACTTCCCGTTCTTCATCAATCGCGATTGCGTGCAACGAGAAGCAAACCTCAGGGTTTCGCGGCCTATACGCCACAGCCTATCTTGAATCCAAACAGATCCGGTTCCGGGTTGtactattatttaaaacaaaagacaattGaacaAGACGATTCGGGGAATACGTGGTCCAACGAATCGGTGCCAGCATCTGATTCCACGCCGCACATCAACGTTGGTCCTCAATTCCAGTGCAGCATCCCTACGTTCGTGCCACCTTACAATCGAGTCACGCATGAGAGAGCGCCGGAGGACCTTCTCTGGGATCCTGGTATAACTCAGTGCTCCGATAGTGAAGTTGACATGTACTTGGATTTCGCGTGCTGTGCAGCCGTTCCTGGAGGCGGCAGGAATCAGGAGTACGCCATGCATTTACTTCATATGTGCGGCGGAAATAtacatGATGCAATGCTGAAACTGATGCAGCCAACGCCATCGCTTCCAAACGAACATCCACTACTCTGTTATCAGTATACTGAAAGCGATAAGTGGACTGCCGGAGAGACAGAACTTTTCCATCAGTCTCTTCATAAACACGATAAAGACTTTTATCTTATAGCCCAGGAGATTGGCACCAAAACGGTAAAACAGTGCGTGCAATTCTACTATATGTGGAAAAAAGTGTGCACTGATGAATATAGAAGGTTAAAGCAAAGTCGGGAACGGAGGCATGGCATAAGAAATATGGACTATGATGAAGAGAAACCTTATCCTGATGCTAAATTGCTTGGGATTGCTGACACCGGCTCACCAATGCCAATTCAAGAACATAGAAACTTCATTTGTGAATTTCCTGATTGCTCTGCTAGTTTCAATTCCAGGGCCGCTTTGAACGGTCACATCAGGATACATGGAGGTACAGCGCGAAATTCCCCGACACCAttgcatcatcatcatcatcatcctcATCACCACAATCATCCAATGCTTGACCCACTGACGACGTCATCGACGCTCACAAACGGCAGTTTACATCATCTATTAGGCAAACGTTCGATGAACATGAACGGCATCGGCATGCAATCAATGCAGTCGTGTCACAATGCAGATCCGACCGAAGACTACCCTTGTAAGATATGCGGGAAAGTGTTTACGAAAATCAAAAGTCGTAGCGCTCATATGAAATCGCATCGTCCACCCGACGCTGAACCGATGCGACAAAGGCATAAAGACAAAGAGCAAGTTACATCGTCAACATCTACCACCGTCGCCGCCGCCATCGCCTCAATCGTCACAACATCGCAAACAACATTCGACTCCGTGCCAACTTCGTACAACACttag
Protein Sequence
SQQNASTKGNASNSSAQNKVSSSGSSVPNAGSSNSNTSSSNATNKTEPKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDADNKKSEKKDTTGPPLQTASVSVRALIEEKIINKRITNTPTTTATATTTTIQNEDVGRNTNAPPLFPLTVHSTTTNTSDLDSKITSFVVPAPPQQLTTEKSRRHSDAEAFTMPRTPNGTATQQEAEALADLILKREKATVKRTVSDPGQQQSQASPQQPSQHQQASQIIQFQSGADSFTLAYQSEDGGYLSPSLQDEVFTQVPDSMLLQGVDAQQLASIQFQTDSLLQDQSDHQLLEDYTNLQDTVVQSPSYQSSHSVNQELQAVLDSPLPESLAEFSTYHSTGNLDMSSPGYQTQSPVQYSSQSPHATLAAHSPLQSPLIRHDSPGFAYPTPPASHEGLSPCFGQNSMLPMVSPKQNDFGQMVSRDLDDPQQPSSPLTAAFFTSTMSSSAAVEEALEEVLPGESIAGDELYPSLTNSPPPPQSQSPLSVGLTPVASPLSNIPTSSTPASSAHPTFTQNTVTYPMSPHFTLQSQMMPNSDDPLLSSSPKDFVPRKKFEFNGLPLKVISSNGLLDLNNANLTGILVESNGEIKFIQTGGTGFQTKNILVTGTPILATTTTQQQPPNITIKEEPGVQSKNLLVQKITKAKAISLKAKDIKQEDISHDVFLSPTNVTPSPVRLSRKRTRTEPLQLPVLHQSRLRATRSKPQGFAAYTPQPILNPNRSGSGLYYYLKQKTIEQDDSGNTWSNESVPASDSTPHINVGPQFQCSIPTFVPPYNRVTHERAPEDLLWDPGITQCSDSEVDMYLDFACCAAVPGGGRNQEYAMHLLHMCGGNIHDAMLKLMQPTPSLPNEHPLLCYQYTESDKWTAGETELFHQSLHKHDKDFYLIAQEIGTKTVKQCVQFYYMWKKVCTDEYRRLKQSRERRHGIRNMDYDEEKPYPDAKLLGIADTGSPMPIQEHRNFICEFPDCSASFNSRAALNGHIRIHGGTARNSPTPLHHHHHHPHHHNHPMLDPLTTSSTLTNGSLHHLLGKRSMNMNGIGMQSMQSCHNADPTEDYPCKICGKVFTKIKSRSAHMKSHRPPDAEPMRQRHKDKEQVTSSTSTTVAAAIASIVTTSQTTFDSVPTSYNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00902613;
90% Identity
iTF_00902613;
80% Identity
iTF_00902613;