Lnew009448.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Liometoxenus newtonarum
Gene Symbol
Jarid2
Assembly
GCA_030264535.1
Location
JARJEB010015048.1:569-7420[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.3e-21 5.9e-18 65.4 0.0 8 89 1422 1501 1417 1501 0.93

Sequence Information

Coding Sequence
atggtATTCAGCAGAAAGAGGAAAGATAATAGGTCATCCAGTTTTATACTCGATGATAGTCCGAAAAGGACGAAAGTTCAAGCGCAAAGGAAATTTGCCCAAGGATCAAACGTGAACAGTCCGGTGTTGACCCCAGTCACCGAAATCGAAATACAAGAGAAAGTGATACCCGAACCGATTGAACTCCTCCCTATGAAACGACCCAACACCGAAgactttttaacatttttatgttttcgtgGAACGCCAGCGTTGCCTCCGAGTTTGAGCTTCTTTAACAATGTGTCGATGACTGAAGGACATCCACCTACATCCGAATCTCCTAGTTCGAGCAAAAACGGTGTTATCTTGCCGTCCAACATTTCGAAAACGCAAGGTGAAAAACCATTTATTGCGTTTGGTGTCCGGAAACGTGCTGATCCAATTGTTGTGTCCAGACACATGGATAAAAAGCGAAGGCATGCACTGGCACTTCAAGCACTGCGACGCAAGTATCAGGAACAAAAAATGGCCAAGATACGGGCGATAACGATAAGTAAACTGTCGGAAAAGGTTCATACGAATAAAACGGTCGTCAGAACGACCAGGTCGGTGACGAAAGCGGAGCCTATAACTAAGAAAAGTGTAGGACAAAAGACCAAGATCACTGTTGTTGCTACTAAACATGTTAAGGTCACTACGAGGAGAACCAGCACCCAAATAAAGCAGACGGCGAATACGGGGATCAAACAGAAGATGTGTTTAAGGAATTTGAGGAATCGCGTTGTCAGGAGGGAGctggaaaagaaaaagaaacccATTCTTAAAAAGGACAAAAAGATTGTCAATGTGAAGCAGGAAAagataattaaagaaaaggaagaagatgaagatgatgaaTATACATCAGAGGATTCGGAATCTCAGGACGaaaagagtgaaaagagtAAAAAGAAGTATCAACTAGCCAGGAAGGAGGTAGATGCACGTATTACACGTTCAAATATAATCGCAACGAGACGCAATAAACGGTTAATGATAAGACAACAAAGTTTGAAGGCAGCGCCAACGTCGCCGAGATTAAGGTCGCAGCTGCGAAGGAAAATTCTTCAGACAAAGTCGGAGATTACAGTTCCGTTGAATAAGCGGCGAATTTTGACGCGAAAGGTGCAAATAAAGACCAAAACTATTTCGAAAAAAGTTGCTATTGCTAGCAAGAATGCTAAGGAAGCGGAAGAGAAGGTGAAAAGAGTGGCGAAAGTTGATGAGAAACGGACAAGTGTTCGCGATACGACTAAAAAACGACAGGACACGTCTTCTCCTGAATTGAAGAAATCTAAAGTTAAGAAGCCAGTTGAAGATAAGAACATCAAAAAGGTGACGGCGACTGAAGAGAAGAATAAAAAGGGAGCTgaagataaaattaaaaaagtagtCGAAGAGAAAAGTAAGAAGTTAATTGAAGAACGGAGCAAGAAGTTACCGGaagaaaagaacaagaaattgCTTgatgaaaagaagaagaaactcACCGAGGAGAAGAATAAGAAGCTGGCTGATGAAAAGGCTAAGAAAATTACCGaggaaaagaacaaaaaggCATTGGAGGAGAaagttaaagaagaaaaacaaccAAAAGTTGTGAAGAGTCCGCCTGAAGTCAAGAAGAaggaagtaaaagtaaaagaatcACTTTGCAATACGGCGAAGGAAAAGGAAGTAGTTAAAGACAAAAAAGAACATGATATCAAACCAGAGATGATTAAACAAGAGAAATCAACGAAAAAGTTGGATGTAGTCAAGAAGATTAAAGaagataaagaaaagaaaccgATTGTAGGTGTAAAAGACATAATTGAGGCGGTAGTTGAAGTGAAAATTCTGCCTGTAATCGAAAATAACAGAATATTAATCGACAAGGATGTAATTATCGAAGAAGTTCAGCCCTTCAAAGAGACCAAAGAGTCCATGCCATTGAAAAAAGTAGAAACGGAGACCCCAAAAGTCAATAAAAAGCaagttgaaaagaaaataagtcCAAAAACAGTTCTAATTCCgaagaaaattgataaaaaactGGAAACGAAGCCTTTAGAGTTGAAAGAAGTTGATAAAATTAAGGAACCTTCGATTTCTCAAAGGCCATCACGTAAAACAAAAGTCGCGGCAGCGATTTACATGGAAATCTTAGGTAGGAAGCTTGTAAATGATGAAGATATCGATGATATGTCAATTGATAGTTTTCCTGAGTTACCAAACGTTCGAAGAATGGAGCAACGCGAAAACGAATTGAAAGCCAAAATGAGTAGGTCAAGTAAACCTGCGAAAGATCTAAGCAAATTGGACAAGAAAGGTAAAGAATCCGAGTCGGAAACGGAAAAGTCTGTGAAACAAAGTACATCGAAGCCAATCAAGCCAATTCTTGAACTAAGTGAAAAGCGAAAAACGCGTAATCCTAATTGTAATGTACAAGAATCTGCATCAGATAACTCGTTTACTGCGGATATACGCACGCCCACACCTAAAATACCGCCGCGACAATCAAGAAACGTTTCGCCGAAGTTGTACAAAAACTTCAGTGATTCAGAGTCGGAAGTTGGCACTGACACGAagttaaaaacaaagaaacgcAAGTCTGAAAATGCTGCGGACTTGGAAGGAGCGAAAAAGACTTCGGttaagaagaaaacaaagaaagtcGAAGAAAATCGTGAAGATGATTTCAGCGAGTCTGATGAGGAACCGTTGGCGAAATTCACGCAGAAAGCAAGTGAAAAGAGCAAATCGGAGAGTGGTAGCAATATGGCTGTGAAACAGAAGCGGGAATGTGCTAAACGTCCCCAGAATTATCTGCCATTATTTTCTTCGTCCGATGAAGAGGAGAAATTCTTTCGGGGATTTCAATCGGGGAGTGGAAGTCAAGTACAAGTACAGACTAAGAAAAAGATTGTCAAGACTGAACCAGTTGCTGAAGCTTTATCAACCAAAGACATCGGACGAAGATTTGGTAAGGGAAAAGTGAATATGTCGAATGAACAAATCGAGAAATGGTTGAACGATAGTGTGATGGCTGGCATGACTCTAATCAAAGCAGAAAACGATGAAATGCTTAAGTTCGGTGAACGTATACCAACAGAAACCACCCTCGACGGTAATCTTAGCGCAGTAAACACGGAACATCTTAAAAACTCGTTACTGCTCAAAACGGAAGAAAAAGAAGATCGCAAACCAGATCCCATCTCCTCACCTGTGAACACGACACCTGACAAATCAACAACAAGTTCCCAAAAACCTTTATCCAGCGAAAAGAAGATGATTTTTCGTAAAGCTGACAAAATGTGCAAGAACACAAACGCGTTTTCTGCATGCAATGAAAGCAGTGTTTACGCGTTTGAGGCTGATAACGAAGATTCAGTTAGTACACCGTTTCGTAGACCTTCGCGACGACCAAGCAGCACTGCAACAAGTCGATCGGAAGATGACGTAGCTCGTCTTGatcttgaaaacaaaaacaagtttcGTCTACCGGTGAATACCGTTATGAATAAAGCGAAACAAGAAGTTTCGTTAATGCTCACGGATGAGTCTAACAATAGCGGGTCTATTACGGTTCAAGTCAATTTGGAGTCGACCGATAATGAGCCGCAGACACAAGCTGATAACGAACACATGTTTTATATTCCCTTTCAGCCGGGCCATAAGCCTGGAAGCAATATTCAAGGTGTATCAATTAAAATGGGAACGGAAGGTAGTAATAATTCGAAACTAATTATGAGCGCTAAACTTGTCCGACAAAATTCCGCGGGCAGTATTCCCGAGAAAACAACGCCGATGTTCCCGCCGTCGAGTCcaattccatttaaaaaactggAAACCAAGTCAAAGGCAAGCTGCAGCATGAGCGAAACGTCGGatgattttaaatacaaaGTACCGAGCTCCCCCAGCGCAAGTTCATCGTCCAGCGCGAAACTTGTCAATAAGAAGAAGGCCAACGAAGATTTCTACAAGCCAATCAACACGACGGAGTTCCCGCATCATCTTACACGGCCGAAAATTGTTGAAGCTCCGGTGTTCCATCCAACGGAAAAAGAATTTGTGGATCCACTCGAATACTTtgaaaaaatacgaaataaaGCTGAAAGGTTTGGGATTTGTCGCATCATTCCTCCGAATAACTTTAAACCGGAGTGTAAAGTTCTTGATGAGATGCGATTCACTGCGTATAATCAGTACGTGCATAAAATGATGCACCGATGGGGGCCTAACTTCAAGGAATTGGTCGCAATTAGGAAGTATTTGGCCACACAGAGTATAAGTCTAAAGCATCCACCATGGATCGGTGGGATTGAAATAGACTTACCGAAATTGTACCAAACCGTTCAAACACTCGGTGGGTTGAAGGAAGTCATCGAAAAGAAGAAGTGGCCACGCGTTTCCGAGCTTATGAAAATCCCTAAGTCAGCACAGGATAGAGTTACCAAACTCGATgatatttattgcaaatatcTCTTGCCCTATGACACTTTGTCACCAGaTGAACGTGATAAACTTTTCACATCAGTTGAATCCGACTGGACGAAACGGGAAGCTAAGATGCTTGAGAAAGCGAAAAATGGTACCAACCTCCAGCCGGAAGTAGAAGCTGAAGTACCAGACGCAGATGATGACGAGGAATCTGATGAAGAAGATGAAAGCGACATTGAGTGTATCGTCAAAGGACGTGGCATGGCGTTAAGTGCTTTTTATCGTATTGCACGTAACACGATGGCAATGTGGTTCAAAGAAGGTGAGCCAACGCCGCAAGAAGTCGAAGAGGAGTTTTGGAAGCACGTGACTCAGAAAGAACATCATATTTGCGTTCATTCCGGTTCGATTGACTCGGGTAACTTGGGCTACGGTTTCGCTGTGTCGAAAAACAGTCCGTTCGCTCGTCACGCGTGGAATTTAAAAGTGCTGACGAATAATAGCGGCTCCATTTTACGATCTATGGGTCCGGTGATGGGTCTCACAGTACCAACACTTCATGTCGGCATGTTGTACGCTGGTTGCTGTTGGTACAGGGACCCGCATAGTCTGCCATGGATTGAATACCTTCACACAGGGGCCAAGAAAATATGGTACGGAATACCGGATTCCATGAGTGACAAGTTCCACGAGACGATGGTCAAACTCGTTCCACATTATTGTTTGAACAAGAGCTTGTGGTTGCCTACGGATACAGTTATGGTACCGCCAAGTACACTCGTGGATAATGGCGTGTCGTTGACAAAAACTGTTCAGGAACCGGGAGAGTTTATCGTCATTTTCCCCAAAGCTTTTACTTCGAATATATGTGCGGGGTATGTTGTTTCTGAGAGTGTGTTCTTTGCACCGCCTGATTGGCTAAGCTGCGCTGATAAAGTGTTTTTGGAACTGAGAAACAGTTGCGAACCTTCTATGTTTTCCTACGAGCGATTGTTGTTGAGTATGGCGGAAGATACGCGGAGCGATGTCAAAGTTCTGAGAAGAATCATTCTACCAATTCAACGGATGATTGACAGGGAGAAGAAGGAACGTGAGACGATTAAGAGCTTGGGTATCAAGAAAGCTGAACGGTTACCATTGTTAGATGCtaagaggaagaagaagatgcAGGATACGGATACGGAGTATATTTGTGAAGAGTGCAGATGGAATTTATATTGTTCGATGATTTGTGATAGTTCCGATAATGCATTCTACTGTTTGGAACATGCCATCGAAAACATACAGGAGAAACGTTTGGATTTAGGAAATTGTAAGTTAATGTATACGTATGACGATGAAGAGTTGAGTAGTTTTGTAGCCAAAATTAATTCCACCATCGAAGCGAAATTAGTCAAAAAGGTAGGAAGCAAATTTGCTGGAATGGCGACTCTTCTAAATCGTTAA
Protein Sequence
MVFSRKRKDNRSSSFILDDSPKRTKVQAQRKFAQGSNVNSPVLTPVTEIEIQEKVIPEPIELLPMKRPNTEDFLTFLCFRGTPALPPSLSFFNNVSMTEGHPPTSESPSSSKNGVILPSNISKTQGEKPFIAFGVRKRADPIVVSRHMDKKRRHALALQALRRKYQEQKMAKIRAITISKLSEKVHTNKTVVRTTRSVTKAEPITKKSVGQKTKITVVATKHVKVTTRRTSTQIKQTANTGIKQKMCLRNLRNRVVRRELEKKKKPILKKDKKIVNVKQEKIIKEKEEDEDDEYTSEDSESQDEKSEKSKKKYQLARKEVDARITRSNIIATRRNKRLMIRQQSLKAAPTSPRLRSQLRRKILQTKSEITVPLNKRRILTRKVQIKTKTISKKVAIASKNAKEAEEKVKRVAKVDEKRTSVRDTTKKRQDTSSPELKKSKVKKPVEDKNIKKVTATEEKNKKGAEDKIKKVVEEKSKKLIEERSKKLPEEKNKKLLDEKKKKLTEEKNKKLADEKAKKITEEKNKKALEEKVKEEKQPKVVKSPPEVKKKEVKVKESLCNTAKEKEVVKDKKEHDIKPEMIKQEKSTKKLDVVKKIKEDKEKKPIVGVKDIIEAVVEVKILPVIENNRILIDKDVIIEEVQPFKETKESMPLKKVETETPKVNKKQVEKKISPKTVLIPKKIDKKLETKPLELKEVDKIKEPSISQRPSRKTKVAAAIYMEILGRKLVNDEDIDDMSIDSFPELPNVRRMEQRENELKAKMSRSSKPAKDLSKLDKKGKESESETEKSVKQSTSKPIKPILELSEKRKTRNPNCNVQESASDNSFTADIRTPTPKIPPRQSRNVSPKLYKNFSDSESEVGTDTKLKTKKRKSENAADLEGAKKTSVKKKTKKVEENREDDFSESDEEPLAKFTQKASEKSKSESGSNMAVKQKRECAKRPQNYLPLFSSSDEEEKFFRGFQSGSGSQVQVQTKKKIVKTEPVAEALSTKDIGRRFGKGKVNMSNEQIEKWLNDSVMAGMTLIKAENDEMLKFGERIPTETTLDGNLSAVNTEHLKNSLLLKTEEKEDRKPDPISSPVNTTPDKSTTSSQKPLSSEKKMIFRKADKMCKNTNAFSACNESSVYAFEADNEDSVSTPFRRPSRRPSSTATSRSEDDVARLDLENKNKFRLPVNTVMNKAKQEVSLMLTDESNNSGSITVQVNLESTDNEPQTQADNEHMFYIPFQPGHKPGSNIQGVSIKMGTEGSNNSKLIMSAKLVRQNSAGSIPEKTTPMFPPSSPIPFKKLETKSKASCSMSETSDDFKYKVPSSPSASSSSSAKLVNKKKANEDFYKPINTTEFPHHLTRPKIVEAPVFHPTEKEFVDPLEYFEKIRNKAERFGICRIIPPNNFKPECKVLDEMRFTAYNQYVHKMMHRWGPNFKELVAIRKYLATQSISLKHPPWIGGIEIDLPKLYQTVQTLGGLKEVIEKKKWPRVSELMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPDERDKLFTSVESDWTKREAKMLEKAKNGTNLQPEVEAEVPDADDDEESDEEDESDIECIVKGRGMALSAFYRIARNTMAMWFKEGEPTPQEVEEEFWKHVTQKEHHICVHSGSIDSGNLGYGFAVSKNSPFARHAWNLKVLTNNSGSILRSMGPVMGLTVPTLHVGMLYAGCCWYRDPHSLPWIEYLHTGAKKIWYGIPDSMSDKFHETMVKLVPHYCLNKSLWLPTDTVMVPPSTLVDNGVSLTKTVQEPGEFIVIFPKAFTSNICAGYVVSESVFFAPPDWLSCADKVFLELRNSCEPSMFSYERLLLSMAEDTRSDVKVLRRIILPIQRMIDREKKERETIKSLGIKKAERLPLLDAKRKKKMQDTDTEYICEECRWNLYCSMICDSSDNAFYCLEHAIENIQEKRLDLGNCKLMYTYDDEELSSFVAKINSTIEAKLVKKVGSKFAGMATLLNR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-