Lnew001818.1
Basic Information
- Insect
- Liometoxenus newtonarum
- Gene Symbol
- Arid5b
- Assembly
- GCA_030264535.1
- Location
- JARJEB010003007.1:1-4590[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-26 1e-22 80.6 0.0 2 89 147 232 146 232 0.93
Sequence Information
- Coding Sequence
- ATCAAACCAACGAAAGGCCCAGCAGTGATAATCCTCAGTTATCCAAGATATTGCCGTTACCGTGGAATACTAAAACGACTCGAAGGAGTTGAAGATGATCAACTCAAACATCGCTTTGTCAACGCATTGGGAGGCATTCGCGTAAAAAACTACAATACGCGAATTTTATACTGTCGCGACACTTTCGACTATCCGGAGCTCGAAGGACACGAACTGCTTTGCAATCATCTGGCGCCCAAATTGAAGGGTCGACCGCGCGGCAAACGAAAAAAACGTAGCATCTCGCCGGGTTCCGAAAGCAACGAATCGGAATCTTCTGTTTCAAATGTGTTCAATTCCGGAAAGAACAAGCTAACGATCAGCGCTGGTCGTAACGGTTTACGTTGTGATACGACGTCAACAAGACGCAGCACACGTTCGTCGGACAGCAATGCTGAGAACAAAGACTTCATTAGGCAATTGTcggcatttatgaaaaacaataaaacaccCATAGGAAGGATACCGTCATTAGGATATAGAGAACTTGATTTGTATTCATTCTACACAAAAGTGGAAAGACTTGGTGGCTACGATGCGGTAACGCACAATCGATTATGGAAATCGATATTCGACGATCTCAGCGGCAATCTGACGAGTACAAGCGCTGCAACAGTAATTAGACGACACTACGAAAGATTTTTGTTACCATACGAAAAGCATCTGAAAGGTGAAGATTATAAACCTTTAGCCGTCTCAGAACGCTGTCGGTTAAAAAGTAAGACTGGTAGTAGTAGTACCAGTATGAGTGACGCTGAAACAAGTGAAGGTACGTCGCGTAGTGGGAACAGCACGCCAGTTCCCCAATTGCTAACATCTTCTTCGTCGACGCCGAGTACGCCCACCGAGTCTAAAGATTTCACTAACATTAAACTGGACACAACGAAATCGTTACGCAGCGTACGCGTGAAACCGGAACGTATGCGGGAGAATAAAGACCACCCCGGAATGGTGACATCACCTGTTTTACCCACACAGGAAGATAAAGTGCTCTGTAAGGAGGAAATCAAGGTTCCCGAAAAGGATCCGGAACCTAGTACCGGTGCAGTAGCGCCTGTACAGAAAATTTTACCGGAAATGTCCGCATCGCCTGCTGAAGGCAaagaaaatatacctatacctatcaTTAACGATAGTCTTAACACAATTCCGATAACAAATGATAATGATCAAGACGATCTTGTCGAAGTGCCATATAAACCGAAAACCCCCGAAAT
- Protein Sequence
- IKPTKGPAVIILSYPRYCRYRGILKRLEGVEDDQLKHRFVNALGGIRVKNYNTRILYCRDTFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSISPGSESNESESSVSNVFNSGKNKLTISAGRNGLRCDTTSTRRSTRSSDSNAENKDFIRQLSAFMKNNKTPIGRIPSLGYRELDLYSFYTKVERLGGYDAVTHNRLWKSIFDDLSGNLTSTSAATVIRRHYERFLLPYEKHLKGEDYKPLAVSERCRLKSKTGSSSTSMSDAETSEGTSRSGNSTPVPQLLTSSSSTPSTPTESKDFTNIKLDTTKSLRSVRVKPERMRENKDHPGMVTSPVLPTQEDKVLCKEEIKVPEKDPEPSTGAVAPVQKILPEMSASPAEGKENIPIPIINDSLNTIPITNDNDQDDLVEVPYKPKTPE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -