Basic Information

Gene Symbol
Arid4b
Assembly
GCA_030264535.1
Location
JARJEB010028403.1:1741-8953[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-27 2.8e-24 85.6 0.5 1 89 88 173 88 173 0.95

Sequence Information

Coding Sequence
ATGTCGCGTCGAATAACCTCAAAACGTATACAACCAAAACAACATATTCTtTACACTGTGCCAAAGAAGGAAATACTCGAATTCAAACGCGATTCCAAAGCAGATAGTACTTCTCTGATTGAAGCCATAGAACGAGCGCACAAATATCTCGACAATGATGAACTTCCAGCCCACTGGGAGAGGAATTCGTTGTTCAATTCGAATAATTTCTCTGATTCGGATTTTAATTATTCGGATAGTTCCGACGATGAacaaaccgaagaaaaggATCATTTCGTCGCGCAACTATACAAATTCATGGACGATAGTGGCACGCCATTGAATAAAACGCCGACCATCGCAAGTAAGGACGTCGATTTCTATCGACTATTTCGCCTGGTTCATAAAATGGGCGGTTACAATCGCGTTTCGAATCAAAATAAGTGGAAATCGGTTTCGGGACGTTTGAAAATGCCACAGAATCAAAACACGTACAATCAGGTGAAGCAAGTGTACAAGAAGTGTTTGCTTACGTACGAATCGTTCTATCGTACGCTCGGCTGTACGATGTTAAATCCAACGAGAAACGCGAAAAAGAATCGCGGCCGGCCACTCATTCGCGACAAGGATCGTATGACGCCGGTGCAAAGCCCCAAGCCCGAAAAGGAGAAGGAAGAGGAGCCGCCGCTGCTGCTGGAAGTAGTTAAGAAGGAGAAGGACGACGAGAAGGAAAAGGAGAAAGGAAAGGAAGAGAAGCGGGAGAAGGAGGAGGAAGTGTTGAAGACACCGAAAGTCAAGAAGCTGGAGAAGAAGATGGAGGATGAGAAGAAAAGCGTTAAGAAAGATATGCAAGAATCGGTTGAAAGTAGTGATAATAGTAGTGATGCGACGGATCTGTCGGAAGTTGCTGGTCCTTCCACTTCTTTGGCTTCGACGTCTGTAAAAGATCCGTGCCAAACTCCGTCAAGACCGAAAAGGAATGAAggcaaaaaggaaaaacgaGTCAAAGCGCCGACTGGTGATAAAGTAAAGGCACTCATCGAAAAGTTTGAAGAGCAAACTAAGAAGGCTGATGATGAAAAGGAGAAGGAGAAGGAGAAGCAGCCACAGTTTACCAGATCCAAATCACATTCACACGTGCCCAAAGCTAAGGAGAAAGAGAAGGATGTTGGATCACCGGAAAGAGGAGCACAAGAAGTCAAGACCCCCGTCAAGGATAAGGAAAAAGAAGGTGTGAAATCTGTGAAATCCCTCAAAAAGTCCCTATCCGATGATGACAAGGAAAAGAAACGAGGACGCAAACGTATTAATCTTGACGACAAAGACAAACCATCATCAACGAGCACTAGTGAACATTCCGAAACTCCGGGCACTTCCACTGCTGCTCCAAAAGGCTCAGTCAACATTGGGGATAAACTCAAAGTTTATTATGGCCCCACACACGAATCGAAAGTGACTTACGAGGCTAAAGTCATTGAAATTGACAAGGATTCCACCGGGCAGCCTTTGTATCTAGTGCATTACACCGGTTGGAATAATCGTTATGATGAGTACATCACGGTCGGTCGCATTGCGGAGAATTTAAGTGCCACGACAAAAGCGAAAAGGCTCAAGCAGGGTGGTGGTACACCTAGTGGCCTCAAGTCCAGCCCGAAACCGGCTGGCAAGCGAGGACGCGGAATGTCCATTACTGGTCGGAGTACTGTGCAGGAGACGACACCTCGCTCGACGACGCCTTCGAGTGTTACGTCGTCGTCGAGTCGAACGAAAAGTCCTGCTACTCCTGTTTCACGTAATCGTAGCACTCGAGGGGAGAATACTCGACGAACAAGACGTACCTCGGCGCAGACTGATGTATCTGTTCATTCCGAATCCGAGTCGGATGAGAACGAACGGTCCGAGAGTGATGTTGAGCTGGCAAGGACGCGAAGCGGGAACAAGTTGGACGAAGTGGAAAAGACGTACAAACGCAAAATGATTAAGAATAAAGGGGAGAAGCGCATTAAGGATGATGACGATACGGAGAAGGAGGAGGATGAGAAACCGAAGAGGCCGCGGAAGTTTAAAAAACTTGCCGAGATCAAATCGGATAGTGATGATGAGATAGTGCTCAGCGCTCAGCCGAAGGGGCGCGACTTTGATTTGAATCAAATTCGATCGGAACTGAAAGGATTCGGAAAGCCTATTAAGGTTGCCGCGACGGATGCCACCGATAAAGATGCAGCagcttcatcagatgattctgcTACGAATACGGATAATAAGGATACGAGTGAGAACGAAGCGGACGATAAGGACAAGGAGAAAAAGGTGATTGAGAAGTCGTCGAGTTCGGATGATATTTACGAGTTTAAAGAGCCGGAACCCTTTGAATTTGGGGCGAGGAAAATTGTCGACGACAAGATTAAGAAGCGAATTCCGAGGCTGTTTGAAGATGTGGAGAAATCTCCGCCGAAGAAAAAGACTCCAAAGTCACCAGGCAAAACGGAATGCAAAGAAGAtattgctgctgctgctgctgctgttgctgCTGCTTCTTCATCTACGCCCGagaaaatcgaaaagaaaCGGTATAAAAAGCCGACGACACCCGTCAAAAGAATTGAAGAGGCTACTCCACccgaagaaattgaaattaaaatcgaGATTAAAGAGGAACGGAAGTCTGATGATCCCTTTGATAAACTCGTCGAATCTCCATCGTTCCACGTGGGCAAGTCTACAACACCTGAAAAACCAGCTCCTCTCCTCGGCCTTGTTGAAAAACCAAAGGTTGAAAGTATTCCGGAACCTTTAAGCATTTTTGATTTGCCCGATTACAACGAGGAAAACAGTGAAGATCGCTTAGACTTATCCGACAACGAAGAACGCCCTAATGAATTATCATTCACCAGAGCAAGTCCGCTGTTCACCAATTTCGGGAAACCCTCTCCGGATCACATCATTGAAAGTGCATGCGATAGTTTCGCCAGCTCAAGCGAAAAATTAAAGGATATCATTGTTAAACAAAAGGATAGTGAAGATGATGAAGATTCGAATCTCCAGGCATCGATACAACGAGCCGAATCGGCTTTGACAACTCTACTGGATTGCAATCCCATAATGTTGGACTCGTCTAAAAGCCAGAATGTCATCACGTTAAATCGTATTGAACCGGAGGATGATGACAAAGAAGAGATTGTTATCGAAGAAGTGAAAGAGATGATTCAACTACCCAAACAAATATCTGCCGTTTTTCAGGAGTCTGATAGCTCGATACTTGAGGATTTGTATAATCCACCACAAATTGCCGtgagcaaaacggaagatatCAAGGATCTCAGTGTTTCCATCAAGACAGGCACCAAGATTGCGGACTCAATCCTACAGAAATTGACGAAGCACAAAGAACCGGCAGAAGCATCTCCCACTAAGGTGGAGGAGACGGCCAAGGTTGAAGAATCATCACCACCGATGCCAGAAACAAACGCAAGGCATGAAACGAAAGTCATCAAACTCGTTGAATCATCGTCGCCCATCAAACCAGAAACCAAACTGATATCGAAAATTGAATCGAATCTCGAAACGACTCCAACTAAATCGAAGCCCGAACCGAAAGTCAAACCTCCTCCACCTGTTAAAAAACCAGAAGCGGAGCCCAAAAAGCGGACGTACAAGAAGTTTGTCAGTCCGGAGTTTATCGAGGAAAGTGATAGTGATAGCGATAGTGATTCGGATCATCGTTTGATTATTGCTAGATCCGATGAGGATTCGCAATCGAGTACAACATCTTCCTCCAATACCGAGAAAGCTGAGCCCGCCGAAACGGAAGTCATCCGAATGAATGAGACGAAAGTCATTCAGCTCATCGAACCGGAGCCGGTGGAAGTGGAGGAGAGGAATTTTAAGATCAATGACGTGAAGATCGAATTCAAGGAGGAAGTTATTAAGATTGAAGAGGAGCCTGTCGAACCCAGTGAAGAGGAGACGAAAGAGGAAGAGCCCGACTCACAATTGCATTCGATGCTGCTGTGCGAGGAGACTATCCCGGGGAGTCCGGCGCCATCACCTATGAATGAAACTAAGCCGAAGACGAAGGCCGTCATGGAAATGCCATTTGCAAGTGCTCCGAGCAGCAGTAACAGCAAGAATGTTATGttgcagcagcagcagcagcaacagcaGCAACAAGAAGATAAACAACCATCACCCGGACCAATTATAATGCCATTGCAAAATAGAGATAATACTAGCACGAATACTGTGATGGATAACACACCGCCCACTACACCAGAGAGCACAATTAGCAATTTATCACCTAGGGGCGAAATTGGTGGATTATCTCCAAATAATGCGGACAACGAAAGTTGCAAATCGACTGAAGTCGATCTGGACTTGTCAACAACTCAGCGGCGAGCAGCCGCTTCCAAAGTGACAAATTACAGTGAAGAAGACTCGTTAAATTGTGAACCGCATACGAGCACGAAGAAACGCGATGACTTACCATCCCCGTGCAAGAAGCGACGGCGTTCGTGTAAGGGCGAGAACGACATTCCGGTGAAACGTGGCCGGAAACCGAATCGATCGCGACATAATAGCGATAGTGATGACACGTCCGAACACTCTTTGCACGGTTTGATGACAGCGCTTGATACTCGACTCACACGATCTCCTAGACCTTCGAAGTATAACTTCTTTGTCGAATTTGaTCCTAGTTTGGATAGTGCAGCGAGAATTGCAGTATTACTTCAGAAATTACAAGACTTGCGGAAAACGTACGCAGATGTGAAAACGGAATTAGCCACGATTGAACGAAGGCGGAAAAAGATTCGAAGGAGAGGACGCGAAGCGTTGAAGACAGCTAAACAGGAAATGGCGTGTACATGA
Protein Sequence
MSRRITSKRIQPKQHILYTVPKKEILEFKRDSKADSTSLIEAIERAHKYLDNDELPAHWERNSLFNSNNFSDSDFNYSDSSDDEQTEEKDHFVAQLYKFMDDSGTPLNKTPTIASKDVDFYRLFRLVHKMGGYNRVSNQNKWKSVSGRLKMPQNQNTYNQVKQVYKKCLLTYESFYRTLGCTMLNPTRNAKKNRGRPLIRDKDRMTPVQSPKPEKEKEEEPPLLLEVVKKEKDDEKEKEKGKEEKREKEEEVLKTPKVKKLEKKMEDEKKSVKKDMQESVESSDNSSDATDLSEVAGPSTSLASTSVKDPCQTPSRPKRNEGKKEKRVKAPTGDKVKALIEKFEEQTKKADDEKEKEKEKQPQFTRSKSHSHVPKAKEKEKDVGSPERGAQEVKTPVKDKEKEGVKSVKSLKKSLSDDDKEKKRGRKRINLDDKDKPSSTSTSEHSETPGTSTAAPKGSVNIGDKLKVYYGPTHESKVTYEAKVIEIDKDSTGQPLYLVHYTGWNNRYDEYITVGRIAENLSATTKAKRLKQGGGTPSGLKSSPKPAGKRGRGMSITGRSTVQETTPRSTTPSSVTSSSSRTKSPATPVSRNRSTRGENTRRTRRTSAQTDVSVHSESESDENERSESDVELARTRSGNKLDEVEKTYKRKMIKNKGEKRIKDDDDTEKEEDEKPKRPRKFKKLAEIKSDSDDEIVLSAQPKGRDFDLNQIRSELKGFGKPIKVAATDATDKDAAASSDDSATNTDNKDTSENEADDKDKEKKVIEKSSSSDDIYEFKEPEPFEFGARKIVDDKIKKRIPRLFEDVEKSPPKKKTPKSPGKTECKEDIAAAAAAVAAASSSTPEKIEKKRYKKPTTPVKRIEEATPPEEIEIKIEIKEERKSDDPFDKLVESPSFHVGKSTTPEKPAPLLGLVEKPKVESIPEPLSIFDLPDYNEENSEDRLDLSDNEERPNELSFTRASPLFTNFGKPSPDHIIESACDSFASSSEKLKDIIVKQKDSEDDEDSNLQASIQRAESALTTLLDCNPIMLDSSKSQNVITLNRIEPEDDDKEEIVIEEVKEMIQLPKQISAVFQESDSSILEDLYNPPQIAVSKTEDIKDLSVSIKTGTKIADSILQKLTKHKEPAEASPTKVEETAKVEESSPPMPETNARHETKVIKLVESSSPIKPETKLISKIESNLETTPTKSKPEPKVKPPPPVKKPEAEPKKRTYKKFVSPEFIEESDSDSDSDSDHRLIIARSDEDSQSSTTSSSNTEKAEPAETEVIRMNETKVIQLIEPEPVEVEERNFKINDVKIEFKEEVIKIEEEPVEPSEEETKEEEPDSQLHSMLLCEETIPGSPAPSPMNETKPKTKAVMEMPFASAPSSSNSKNVMLQQQQQQQQQQEDKQPSPGPIIMPLQNRDNTSTNTVMDNTPPTTPESTISNLSPRGEIGGLSPNNADNESCKSTEVDLDLSTTQRRAAASKVTNYSEEDSLNCEPHTSTKKRDDLPSPCKKRRRSCKGENDIPVKRGRKPNRSRHNSDSDDTSEHSLHGLMTALDTRLTRSPRPSKYNFFVEFDPSLDSAARIAVLLQKLQDLRKTYADVKTELATIERRRKKIRRRGREALKTAKQEMACT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-