Laer001524.1
Basic Information
- Insect
- Liodrosophila aerea
- Gene Symbol
- nfxl1
- Assembly
- GCA_035045005.1
- Location
- JAWNNL010000222.1:171188-174248[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 2 2e+04 -8.1 6.4 15 19 151 155 150 155 0.82 2 21 0.13 1.3e+03 -0.3 0.4 4 10 186 192 185 192 0.95 3 21 6.5e-08 0.00064 19.8 15.5 1 18 200 216 200 217 0.98 4 21 2 2e+04 -5.8 2.9 6 10 243 247 242 247 0.79 5 21 9.7e-08 0.00095 19.3 17.0 1 19 253 272 253 272 0.98 6 21 2.5e-07 0.0025 17.9 15.6 1 19 307 327 307 327 0.94 7 21 0.89 8.7e+03 -3.0 0.5 1 7 351 356 350 358 0.49 8 21 1.6e-06 0.015 15.4 14.9 1 18 361 378 361 379 0.97 9 21 0.7 6.8e+03 -2.7 0.4 1 5 388 392 388 397 0.73 10 21 2 2e+04 -5.0 2.3 5 10 402 407 402 407 0.91 11 21 0.00036 3.5 7.9 17.2 1 18 413 430 413 431 0.97 12 21 3.3e-08 0.00033 20.7 14.7 1 19 440 458 434 458 0.90 13 21 1.1 1.1e+04 -3.3 2.0 6 10 486 490 486 490 0.98 14 21 3.3e-05 0.32 11.2 7.0 9 18 503 512 501 513 0.89 15 21 0.0044 43 4.4 5.8 1 11 525 534 525 535 0.95 16 21 0.86 8.4e+03 -2.9 1.4 6 10 591 595 590 595 0.88 17 21 2.2e-05 0.22 11.7 4.8 1 12 601 612 601 612 0.96 18 21 2 2e+04 -6.9 5.9 1 10 626 633 626 633 0.78 19 21 0.033 3.3e+02 1.6 14.5 4 19 643 658 641 658 0.91 20 21 2 2e+04 -6.8 3.1 10 13 665 668 664 668 0.68 21 21 2e-07 0.0019 18.3 10.0 1 16 705 719 705 725 0.92
Sequence Information
- Coding Sequence
- atggaaaaatttaataaagcacAGGCCAAGAATTTAGCAGCGGCACAGAAGCTCGTGGAAGCCTACGCCTCCAGCTCGGAGGACGAAGGCGAATTGGATGAGCAGCGTATTTTGGATCTGCTTTATAAACACTACCAGAAACCAGAGGTTGCCGGCGTGGCTAAGGGTTTGAATGGGAGCAGTATCAATCGCACTGCTACTTTCCTTGAGAATACACTGCACTCCGGCGCTGCCACGTGTCTGATATGCATTGGCAGCATCAAGCGTGTGGAATCGATATGGAGCTGCAAGAGTTGTTATTGCTTCTTTCATCTGAACTGCATTCAGCGCTGGGCCAACGACAGCGTCATGCAGATGAAGGTCAAGTCggagcaacatcagcagcagggTCACTATAATCATCTAGGTGAATATGTGCCGCCCAAGCGGCAGAAAGCCCTGCACTGGTGCTGTCCACAGTGCCGCAAAGATTACCAGCCAGCTGATCGTCCCACGCAATACGAATGTTTCTGCGGCAAGGAGCTGAATCCACAGGCCCAAGCCTTCCTAGTGCCGCATTCCTGTGGAGAGATCTGCGGCAAGTTGCTGCAGCCCCAATGCGGACACGACTGCAAGCTGCTCTGTCATCCAGGCCCGTGCCCGCCCTGCGCACAGCAGACACAAACCTCCTGCCTCTGTGGCAAGTCTCCGCCACGTTCGGCACGCTGCAACGACAAGCACTggcaatgccagcagcagTGCGACACATTGTTGGCCTGTGGCAAGCACAAGTGTAACCAGCGATGTCACCGCCCTGGCCAGTGCCCACcctgcagcagcaagagctCGCAGCTCTGCATTTGCCAACGTGAGAAGAAGGTGGTCAACTGTTCCGAGCCCAAATGGCAGTGTACTAATATCTGTGGCGCTCTATATGACTGTGGACTGCACAAGTGTGAGCAGCGCTGTCATGCCGGACCCTGTGGCGGCGGTGTGTGTCCTCTGGGATTGCGTAGCTGCCCCTGCGGCAAGAGCCGTTCAACTGGCTCCTGCAGCGAGCAAGTGGACACGTGTGGCGATACCTGTCAGAAACTGTTGAGCTGTGGGCAGCACCACTGTGCGCAACGCTGTCATCGTGGTGCATGCAACCAGTGTCTGCTGCGGACCAAAAAGAAATGCCGTTGTGGCCTGCATGAGAAGGAATTGCCCTGCTCCAAGGAGTTCACCTGCGAGACGAAGTGTAAGCAGATGCGGGATTGTGGCAAGCATGCCTGCAACCGCAAGTGCTGCGGTGATCAGTGTCCGCCTTGCGAAAAGATCTGTGGCAAGCAGCTGAGCTGCAACAAGCACAAATGCCAGTCCGTCTGCCACAATGGTCCCTGCTATCCGTGCAAGCTGGAGTCACAGGTGAACTGTCGCTGTGGCAAGACGCGTCGCAACGTGCCCTGCGGTCGGGAGAAGAACGCACGCATAGTGTGCCAGGAGCTATGTCGCGTTTCGGTCAAGTGTCATCATGTGGTGAAGCATCGCTGCCACAAGGGTGAGTGCCCGCCCTGCCTGCAGCCATGCGGATTACCCAATGACACCAGCGGCTGTGGACATCTTTGCCAGGCGCGCTGTCATGCAGCCATGCGTGTGGTCAGGCCAAACAATGCCGGAATGCGTCCAGTGGGTCAAAAGTACGAGTACCGCACACTGCCGCATCCACGCTGTGAGCAGTCGGTGCCGGTGCAATGCATCGGCGGCCATGAGCTGGCCAACTGGCCCTGCTGGAACTCCAAGCCCAGTTCCTGTCAGCGCAAGTGTGCCAGGCGACTGAAGTGTGGCAACCATAGCTGTGATTTGATCTGCCATACAGTGCCTAATCCGTCGGacttgctgcagcagcagctgggtTGTGGCAACTGTGAGCAGGGCTGTGCCATAGCTCGTCCTCCAGGCTGTGCTCACGCCTGTCCACGCGGCTGTCATGCTCCGCCCTGTGCACCCTGCACGGTGGTCATCAAGGGCAAGTGCCACTGCGGACTCAATCAAGTGATATACAAATGCAGTGACTACTACCAGGAGCAGCAGTCGGAGCAGCAGCTCGAGCAGTTGCGCAGTTGCGGCAACCGTTGCATGCAAAACTTCGAGTGTGGCCACCGTTGCCTGGCCATTTGCCACTCTGGTCCTTGTCCCAATCCGGCATTGTGCCGCAAAAAGTTGCGCATCTATTGCGCTTGCAAGCGCTTAAAACTGGAGATATCCTGCGACAAGCATCGAGCTGGGCAAACAACCTTGGACTGCGATGAGCAGTGTCTGGCGGAACGCACCAAAGCGCAGGCTacggagcagcaacagcaacagctcaagCTGCGCCAGGAGCAGGAAAAGAATCGCTTGGAGTTGGAGAAGTTCGAGCTAAAGTTCGGCAAGCGTAAGCCCAAGGAACGCAAAGCCCAGGGTGTGGAGAAGACGAAGATCAAAGTGAATTGGTCGCGTGTAATCCTCTACACCGTATGCCTGCTGGCAATTGTGGGTGCACTGGGCGTGGCCTACTACGCGGAGAACTGA
- Protein Sequence
- MEKFNKAQAKNLAAAQKLVEAYASSSEDEGELDEQRILDLLYKHYQKPEVAGVAKGLNGSSINRTATFLENTLHSGAATCLICIGSIKRVESIWSCKSCYCFFHLNCIQRWANDSVMQMKVKSEQHQQQGHYNHLGEYVPPKRQKALHWCCPQCRKDYQPADRPTQYECFCGKELNPQAQAFLVPHSCGEICGKLLQPQCGHDCKLLCHPGPCPPCAQQTQTSCLCGKSPPRSARCNDKHWQCQQQCDTLLACGKHKCNQRCHRPGQCPPCSSKSSQLCICQREKKVVNCSEPKWQCTNICGALYDCGLHKCEQRCHAGPCGGGVCPLGLRSCPCGKSRSTGSCSEQVDTCGDTCQKLLSCGQHHCAQRCHRGACNQCLLRTKKKCRCGLHEKELPCSKEFTCETKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRNVPCGREKNARIVCQELCRVSVKCHHVVKHRCHKGECPPCLQPCGLPNDTSGCGHLCQARCHAAMRVVRPNNAGMRPVGQKYEYRTLPHPRCEQSVPVQCIGGHELANWPCWNSKPSSCQRKCARRLKCGNHSCDLICHTVPNPSDLLQQQLGCGNCEQGCAIARPPGCAHACPRGCHAPPCAPCTVVIKGKCHCGLNQVIYKCSDYYQEQQSEQQLEQLRSCGNRCMQNFECGHRCLAICHSGPCPNPALCRKKLRIYCACKRLKLEISCDKHRAGQTTLDCDEQCLAERTKAQATEQQQQQLKLRQEQEKNRLELEKFELKFGKRKPKERKAQGVEKTKIKVNWSRVILYTVCLLAIVGALGVAYYAEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00832593;
- 90% Identity
- -
- 80% Identity
- -