Laer016074.1
Basic Information
- Insect
- Liodrosophila aerea
- Gene Symbol
- pnr
- Assembly
- GCA_035045005.1
- Location
- JAWNNL010001373.1:10194-14350[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1 5e+03 -2.7 0.4 16 25 60 69 58 69 0.74 2 2 1.9e-16 3.1e-13 49.2 2.5 1 35 725 758 725 759 0.98
Sequence Information
- Coding Sequence
- atgtataatgtaCCACATAAGTATCGCCAAGTTTGTCGATTGTGCCTCACTTTGGTTAATGAGTGCGATATCGCAGatctacaaatttataatagtGAGACAACCAGCCCAAATGAAACAGTTAAAAgcttacataaattaaaactcaaaCAGTGCAATAtcaatgaaactgaaaatgacAATGTCTCCAAATGTGTATGCAACGCCCTGGACCCACATACATGTTGCTGCCAAGGTGATAACCCGTTATCAGCCACCAACCGAATGGAAAGCAATAATGAAATGAGCCCATGCAATCCCAATCCCCAACACAAAAACCATTACACACCGAGTGTGCcttcttctactgctgctgctgctgctgctactgctattgctattgccaaCCCGCCATGCACTAACGATGATAGCAATCTCTACGCTCGCCTATTTTCAAACAAAACCACACAGCAATCGCCAGCATTACAATCGCAAAAAGATATTAAATGTGAGCCAACAAATCCAAAATGTCGGGACGGGCCGCAAGATTATTTgcgcgacgacgacgacgacaatgCGAAATCGACATCTGCAAAGAATGTATTTCATGATATCGGCGAAACTGCTGCGACTAACGAAAATTACAATCAAGAGCATAAAGATGAATCATCGCCGCACATTACAATTCAGATATTCAACTGTCTCGCTATTAAGCCCTTGCCGAATGACGGATACCCTACAATTGTCTGCAGGGAGTGCCGCAGTAAGCTGGACTCGTACTGGAAGTTTCGCAATATGGCTCTGAATTCGCACTTTGCACTGAAGGAGTTCTTAAACATAACGGAAACCTCGAAACTTACTGATAACGAGATGGAGATGAAACTCGATGCGATACTTAAGTCGACGTCGGAAGCAATTGCTGCCACGGCCTTGACTGAACTGAGCAAATCGTCAAAAAACCGCTTCAGCCAGCGTCAGACGCCAATGGAGGGTATTCTTTATGCCGGCAAGGACAACAAAGTGCGGCAGAATGAGAACAATATGCGAGATATAGCAGCCCCCTTGCTGTATGCAGCAGCCAATCTATTCGATAATCCGGCCTTAACACAAACTGATAGAGAGACCATGATGACGCAACAAGAGAATGCAACTGATAGAATACCGTTTGAAACGGATGAGAGTAATAAGCCGACGACGATGAATGAGAATTCCATTAAGGATGCTGAACAACAATATAAgaacttgcaacagcaactagagACTGCCGCAGTGCTGattaatataagtaaaaagATTGTCATCTCACCACCATGCTCGAATCCGCAATCTCCTTGTCTTTCTGCTATCGTAGATACAAGTATTAAAAATTCTGTGATAAAATCGAAACGTCCATCAATTGATAACGACCTAATGCAGGATGGTGTTGAAATAGACTTGTCCGTCAAGAAGCTGAAAAGCAGCgagcaatcgcaatcgcaatcgcaacCCCAACTCCATCCGGCAGccagcacaacagcagcacgcAACTTTTGTCAACCAAATCCGATACTTGATATCCATGCCAACTCGATCCGGATGGAGGATGCAACAAATTATAGTATTAGTATCAATGATGTTGGCAGTGGCGGCGGCGCCACAAGTTATCAATTGAACACAAAAAAACTGAATACCGAAAGTATTTCTGGTTGTCTGACAGACTCCGAGGACAGCTCCGATTCAAATAAACTGGAAATGGACATTGCATCAGCTATGAATGACCGCAAGACGCCGGAGAGTGTGAGCTCCGATCACGCCACAGACGCGGCAACCACACGACTGTGGCAAGCACTGGCGCATTCAGCTGCCAAAAATAAGGATGAAAGTCGAGCCACGCAACTTTTGCGGAACATGATGAGTCAGACGTTTGTGTATCCTGTGGCATCAACCATAGCACTGGCAAAAGTACCTGAAGAACCATTACCACTCTTAAAGGATATGTCCGACTCTCAGTCGAGTATGGTGAAGATCTGCAGAAGAAAACAGAGTTTTCCCACTAAAACCGATTGCAATGAGCCTGGAGATGGCAAACCAGCTAATGCATACGCGCGTACAGAAGGGATGTCAACCGCATTGCCTGATGGTATCAAAGATAAAAAGGGCTTAAAGCAACTGAATAGCAGCACAGCATTATCAACCTCTCAAAAGGATATGTCCTGTTCGAATTGTGGCACGCTTACAACAACCATCTGGCGTCGCAGCGTTCGAGGGGAAATGGTCTGCAATGCTTGTGGTCTGTACTTCAAGCTGCATGGAGTCAATAGGCCTCATTCAATGCGACGGGACACCATTCACACTCGACGCAGGCGTCCAAAAGAATCGAAAAAGCGAAACaagcaaataccctgtaattcgGCGGTTGAGTATGAAACGCATAACATGAACACTTCCATAGATTGCAAGAAGTTGGATCTCTCAGCTAATCAGGAGGCGCTCAATATTTCAGATATTGTATTTAATAAATATAAAACAGATATATCTGAGACAGGAGGCACTGGCGTAAGCGTAGGTGTAGGCGTTGGCGTTGGaagtgcagctgcaacacTTAAAGATGTCATTTTGAAGCGAAAGAAATCACAATCTTTGCCCGAGTTCCATGATAATCGCGAAAGCGAGGAACTGTCTGTACCTCTAAACCTCGTTTCCAGTGAGAATAATGCAAAGTTAACATACAAcgccaaataa
- Protein Sequence
- MYNVPHKYRQVCRLCLTLVNECDIADLQIYNSETTSPNETVKSLHKLKLKQCNINETENDNVSKCVCNALDPHTCCCQGDNPLSATNRMESNNEMSPCNPNPQHKNHYTPSVPSSTAAAAAATAIAIANPPCTNDDSNLYARLFSNKTTQQSPALQSQKDIKCEPTNPKCRDGPQDYLRDDDDDNAKSTSAKNVFHDIGETAATNENYNQEHKDESSPHITIQIFNCLAIKPLPNDGYPTIVCRECRSKLDSYWKFRNMALNSHFALKEFLNITETSKLTDNEMEMKLDAILKSTSEAIAATALTELSKSSKNRFSQRQTPMEGILYAGKDNKVRQNENNMRDIAAPLLYAAANLFDNPALTQTDRETMMTQQENATDRIPFETDESNKPTTMNENSIKDAEQQYKNLQQQLETAAVLINISKKIVISPPCSNPQSPCLSAIVDTSIKNSVIKSKRPSIDNDLMQDGVEIDLSVKKLKSSEQSQSQSQPQLHPAASTTAARNFCQPNPILDIHANSIRMEDATNYSISINDVGSGGGATSYQLNTKKLNTESISGCLTDSEDSSDSNKLEMDIASAMNDRKTPESVSSDHATDAATTRLWQALAHSAAKNKDESRATQLLRNMMSQTFVYPVASTIALAKVPEEPLPLLKDMSDSQSSMVKICRRKQSFPTKTDCNEPGDGKPANAYARTEGMSTALPDGIKDKKGLKQLNSSTALSTSQKDMSCSNCGTLTTTIWRRSVRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKESKKRNKQIPCNSAVEYETHNMNTSIDCKKLDLSANQEALNISDIVFNKYKTDISETGGTGVSVGVGVGVGSAAATLKDVILKRKKSQSLPEFHDNRESEELSVPLNLVSSENNAKLTYNAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -