Basic Information

Insect: Liodrosophila aerea
Gene Symbol: ZNF526
Assembly: GCA_035045005.1
Location: JAWNNL010001312.1:243303-245356[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.1 7.5 7.3 0.2 1 21 337 357 337 358 0.95

2 10 4.2e-06 0.00031 21.2 0.8 1 23 366 388 366 388 0.99

3 10 0.00013 0.0096 16.5 1.1 1 23 391 414 391 414 0.92

4 10 1.4e-06 0.0001 22.7 0.8 2 23 421 442 420 442 0.98

5 10 1.9e-08 1.4e-06 28.5 0.4 1 23 448 470 448 470 0.98

6 10 1.4e-05 0.001 19.5 2.1 1 23 476 498 476 498 0.99

7 10 0.00053 0.039 14.6 4.0 1 23 504 526 504 526 0.99

8 10 0.0011 0.079 13.6 0.3 1 23 532 554 532 554 0.98

9 10 2.3e-05 0.0017 18.8 3.5 1 23 560 582 560 582 0.98

10 10 0.00021 0.015 15.8 0.3 1 23 588 610 588 610 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.1	7.5	7.3	0.2	1	21	337	357	337	358	0.95
2	10	4.2e-06	0.00031	21.2	0.8	1	23	366	388	366	388	0.99
3	10	0.00013	0.0096	16.5	1.1	1	23	391	414	391	414	0.92
4	10	1.4e-06	0.0001	22.7	0.8	2	23	421	442	420	442	0.98
5	10	1.9e-08	1.4e-06	28.5	0.4	1	23	448	470	448	470	0.98
6	10	1.4e-05	0.001	19.5	2.1	1	23	476	498	476	498	0.99
7	10	0.00053	0.039	14.6	4.0	1	23	504	526	504	526	0.99
8	10	0.0011	0.079	13.6	0.3	1	23	532	554	532	554	0.98
9	10	2.3e-05	0.0017	18.8	3.5	1	23	560	582	560	582	0.98
10	10	0.00021	0.015	15.8	0.3	1	23	588	610	588	610	0.97

Sequence Information

Coding Sequence: ATGGATGTCGACAAGATTTGTCGCACTTGTTTGAGTCTCCAAGGTCCATTTCTATCCATTTACGATGGTGGCTCAGGTAGCTGCTTGGTGGATATGTTGCGCGAGTTCACTAGAACCAAGCCGAGACCTGAGGATAATCTGCCAGCCAGGGTCTGTCTCACTTgtataagtgaaataaataaatgctattCATTTAAACTCAAGTGTGAAAGCTCCAATCGCACGCTACGACAGCTGTTGCCGAATGCTCTGCCAGAAGAGGCTGACAATGTCAAGGAAACTGTCTCACCCGTTGCCACCTCAGAGGCATCTGTCCAAACAAACGATGTATCCACTTCCACAACAGAGGCACAAACCGATGAGGTGATCACAGCCGATGCTGAGCAGAATACCAGTATTGCGAAACCAGCGACATCcgaggatgatgatgactaTGATTATGAGTATCCAGAAGAGCAGGAAGCAGATGACACACCGTCAAAGACCGATGCTGAGAACATTATTTTACATGTGGAAAAAGAGAATATGAAATACGAAACGGAAATCGTGTACAATAAAAGCACGGGGGAACTGCGGGAGGCGTCTGATGGAGCTACTAAAGGAGAAAAGGAGTACAAATATCGTTTGGTCAGCAATGGCAACGGTGATACCTTTATATCACCTGAACCTTCACAATCTGCACAGGTAACAGCACGCAGAGGCGCCTCACGACTGCGGCACATACAGCCTGGTGAAGGGCAAATTAAGAAGGAGAAGACATCACCGTTATCAAGCAAACAGAGCACGACACGGCGCTTGGCCACACAACAGGAACAGTCTTTAGCCGCCGATGCCAGTCCCTCCAAGCAGTCAAAACTAAGTATAGCTAGTAAATCCACAAATGGAGAGCCTGCATTGGAGATGGAAGATCTGAAAGCCAATTATCAGTCATTAAGTGCCGCTGTCAATCCCGCCAAGCAGTCAAAAAATGGAACGACTACGTTGGAAATGGAAGATATAAAGGCAAATTATCACTGCGATCGCTGCAATGCTGGCTTCGTGTTAGAGAAATCCTTGATCATACATCGGCGACAGAACGGTTGCACCAATCGCAATTTCAAGTGCGAGGAATGTGAACGTGTGTTTGTCTCCATGGATCATTTGACCGAACATCAGGCCACACACGCAGCGCACAATTGCCAGGAGTGTGGCATGCGTTTTGACTCCAAGGAGCAGCTGGGCAGGCACATGGTGCAAACGCACAAGCGTAATCTGCGCAATCAGTGCAATGTGTGTCAGAAGGTATTCACCATGCTGTCCACTTTGCGGGATCACATGCGCATCCACACGGGAGAGAAGCCATTTGTGTGCAATGTTTGTGGGAAAGGCTTCTCACAGAATGCCAATCTGCGCCAGCACATGCTTCGCCATTCGGACATCAAACGCTTCAAATGCGAGCTGTGCCACAATACTTTTGTGACCAAAGCGGAGCTAACATCCCATGCCCGCACTCATACGGGCGTCAAGCCGTACGAGTGTGATGTATGCTCATCCAGATTCACCACCAGCTGCTCATTGGCCAAGCACAAGCGCAAGCATACAGGCGAACGTCCCTATGCCTGTGATCTATGCCCCATGCGCTTCACAGCGCTCAATGTCCTCAAGAATCAtcgacgcacacacacgggcGAGCGTCCGTTCGTCTGTCCCTACTGTTCGAAGAGCTTCACACAACGTGGCGATTGCCAGATGCATCAGCGCACACATCAGGGTGACAAGATCTACATTTGTCCAGTATGCAATGAGGAGTTCAAATCCATGAATGATATGCGTAACCATTTGACAATGCACGAACAGGAGGACAAGCGATTGGTACACTTTACGCTGCTCAGCAACAAGGAGAACGGAAACGCAACGCTCGGGGAAGAGGACATGGATGATGAGATGGATGCAGGCGAACTGCTTTAA
Protein Sequence: MDVDKICRTCLSLQGPFLSIYDGGSGSCLVDMLREFTRTKPRPEDNLPARVCLTCISEINKCYSFKLKCESSNRTLRQLLPNALPEEADNVKETVSPVATSEASVQTNDVSTSTTEAQTDEVITADAEQNTSIAKPATSEDDDDYDYEYPEEQEADDTPSKTDAENIILHVEKENMKYETEIVYNKSTGELREASDGATKGEKEYKYRLVSNGNGDTFISPEPSQSAQVTARRGASRLRHIQPGEGQIKKEKTSPLSSKQSTTRRLATQQEQSLAADASPSKQSKLSIASKSTNGEPALEMEDLKANYQSLSAAVNPAKQSKNGTTTLEMEDIKANYHCDRCNAGFVLEKSLIIHRRQNGCTNRNFKCEECERVFVSMDHLTEHQATHAAHNCQECGMRFDSKEQLGRHMVQTHKRNLRNQCNVCQKVFTMLSTLRDHMRIHTGEKPFVCNVCGKGFSQNANLRQHMLRHSDIKRFKCELCHNTFVTKAELTSHARTHTGVKPYECDVCSSRFTTSCSLAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTHTGERPFVCPYCSKSFTQRGDCQMHQRTHQGDKIYICPVCNEEFKSMNDMRNHLTMHEQEDKRLVHFTLLSNKENGNATLGEEDMDDEMDAGELL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -