Laer014015.1
Basic Information
- Insect
- Liodrosophila aerea
- Gene Symbol
- Camta1
- Assembly
- GCA_035045005.1
- Location
- JAWNNL010001167.1:1608722-1620469[-]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.8e-45 6.7e-41 138.8 0.6 11 116 20 123 16 123 0.98 2 3 0.63 6.2e+03 -3.0 2.8 42 78 330 366 293 414 0.52 3 3 0.68 6.6e+03 -3.1 0.1 36 68 488 520 472 534 0.48
Sequence Information
- Coding Sequence
- ATGGGCGGTCCCTCCAAGTGGCATGAAGGAGATGTGAAAGTGGTCAAAGGACATTTGGAAATCGCAGCGATTCTTATCAGCTTTGATAAGCACAGCGAATGGCAATCAAAAGAAGTCAAAACAAGACCGAAGAGCGGCTCTCTGCTGCTCTACTCCCGGAAGAAAGTGCGCTATAGACGCGATGGCTACTGCTGGAAGAAGCGCAAGGATGGCAAGACAACGCGAGAGGATCACATGAAACTGAAAGTACAAGGCACTGAATGCATCTATGGTTGTTACGTACACTCGGCCATATTGCCCACATTTCATCGCAGATGTTACTGGCTCTTGCAGAATCCGGACATTGTTTTGGTGCATTACCTCAATGTACCGTATCCGGATGATAATAAAATGGCCGTCATAGCGCCCAGCATAACGCTCTGGGGCGACAAGAAGGAGTGGACCAAGGAGGAGCTAGTTAGTCAGCTGAAGCCCATGTTATCCACAGTGAATTCAGATGAGGACTCCGATTCGGGCAATGATATTGAAATATCTACTGCCGAGACTGTGGAGTCCATTGTCTGCCAGCTGATGGAGAAGCAGCGTCTGTCGCGGCAGGCAGCTCTGGTCAAGCAGCTGGACTGCGGCTGTGGCGATGCGGCATGCGCCGATGGCAAGACCTGCACACACCCTGTAATGCGCCGATCGGGTATACTGAAGTCAATGGCGGAGAAGCGCGCCAACGATGCCTACAGCACGCACACTGGGGCAACTGGCACGCCCAATGTGGTGGTGGCCAGTAAGCTGTATTCCCGTTGGTCGGAGCGGCATAGGCAGCGTGAGGCGCCACTGCATCTAGATAATCCACATCAGTATCACAATGCCACACAGCAATTGCCGCAGGAGTCGGCGatcaaatttcaaatcattccgcagcagcagcagcagcaacagcagcaggctgACAGCAACTATCAGCAGCAATATCGTGGTGCGAATCAATTGCTGGCCACAAGAAGCAATCTGATAatacaccagcagcagcagcaacaacaacagcaacaacaacagcaacaacaacaacaacaacaacattaccagcagcaacagcagcaacatatgaACTTGCAACGCTTTGTGGCCAATCAGAGCAATCCAAATCATAATCAcagcaatcacaacaacagcaacaacaacagctcagCACATTTAAATCATCGCCTGCAAATTGCCAATACaacaattacagcaacaaaccgagaagctgcagcaacaacaacagcaacagtatcAAATGCTGCCTCAAACGTCATGGATACCGAAGTAATTGAAACCCAAAGCCAGCAGCTAACCGCAAACAAAAtcaaccacaaccacagcaataactgtagcagcagcaataagcaattaacagcagcaacaacaacagcagcagcagctcaaacaAACAACGAATTAAATGTcgtaaataataatgttactagcagcaataactttatatacaatcagcagcagcaagtgaacaattccagcagcagcaacagtcaccagcagcagcaacagcagcagcagcaacaacaacattattataaattgcaacagacaacagtggtggcagcaacaacccccagcagcagcagccaacaacCCCCAGTTGAGGCGATGTGTATGTCACCTGAACATCACAGCAGCAatgggggcagcagcagcagcaacgcccacaacaacaatcagcctaccacaacaacatcagtggcagtggcagcagcagcaacaacgtcTTCCGCTGGCAACACTCCTTCCACGTCGGCAACATCATCCACCTCGAGTTCCTTACAGTCGATTATCGATGgcaatcagcagcaacaaattacaacgacaacagcaacaacaacatcaggagcagcagcagcagcagcaaattgtgATAATTTAATGAGCGCCAATGCGTTGGCTGAGCTGGAATTGGGCAGcaacgaacagcagcagcagcagcatattgCCGgtagcagctacaacaacaacagcaacaatagcgtCAACAATCAGGCCACGGAGGCCAACATCCATAATGGTTGTGCAAATTACAATGCTTCCAGTGATAATAGTAGCCAAATTAGCGCCAGcgatgacagcagcaacaatctaagcaacagcaacaacaccaacaacaacaacagcaacaacgatgaTGAACCACAAGCCGAGACAATGAGCTTCTTTAATGAAACGTTGGATCTGTCACATGAGGACATACAACGCACACTCATTGCCAATATGCCATACGGTAatacagcaacagtagcagcagcagcagcaggaacggtaacagcaacaccagtagcaacagcagcaatcacTGCAGCAATTGGCAACAGCATTGCCAAGCCACCACAAACGGAACAGAGTCAGGGCGAGGATGAGGATGCAGTCGATGTGTTTGCCAACTTGGATGCCTTCGACATGTTGGTGGAGTTCCCAGAACTCGATCTGGATGATAAGCAGGCGCTGAGCAATTCTGCATTGGAGCAGGAGCAAACGCATGCTGCTGCCAGCTCCAGTTCCTCTTCCTATTTGAGCAGCGATTCCACGCAGCGTAAACTACACAATATTTGTGATTTCAGTCCCGAATGGTCGTATACTGAAGGTGGTGTCAAGGTGCTGGTGGCGGGTCCATGGACCAGCGATGGCGGCTGCTATACGGTGCTCTTTGATGCTCAGCCTGTGCCCACTGTGCTGGTGCAGGAGGGTGTGCTGCGCTGCTATTGCCCCGCCCATGAGGCGGGTCTGGTGACGCTGCAGGTGGCCTGCGGTGGTTTTCTAGTCTCCAATTCGGCCATGTTCGAGTACAAGCTCTCACTGCTGGCCGATGCACCCTTCGATGCGAGCAGCTCCAATGATTGCCTGTACAAGTTTACGCTGCTCAATCGACTCTCCACCATCGATGAGAAACTGCAGCTTAAAGTGGAGAATGAGCTGGCGACCGATCAAACCTCGCTTTGTCTGGAGCCCAACTTTGAGGAGAAGCTGGTCGCGTATTGTCATAAGCTAATGAAGCATACCTGGTGCGCACCCAGCACCATTGCTACCTGGAGTGTAGGACTGCGTGGCATGACGCTGCTACACTTGGCCGCCGCACTTGGCTATGCCAAACTGGTTGGAGCCATGCTCAATTGGCGCTCGGAGAATCCACATATCATACTCGAAACAGAACTGGATGCACTCAGTCAGGATGTGCACGGGTTTACGCCCTTGGCCTGGGCCTGTGTGCGTGGTCACTTGGAGTGCACACTGCTGCTATATAAATGGAATCATAATGCTCTGAAGATTAAGACACAGGCACAGCAGACGCCACTGGATTTGGCCAGTCTGAAGGGACATAAGCATCTATTGGCGCAACTTTGTCGTCTGGAGAAGGAACGTTGTCGCAAGCCGCATCCGCGTGGTGGTCTGGCCAATCTCTCCATGAATCTGAGCATTGACTCAGCCAGCGAGGAGGCAGCTTATAGTGGCTATGAGCTGGAACTGCAGCGCCGTCATGATGGTGTCTTTCTGCGTCCTGTGGCATTTCATAGCAATCAGAGTCcgcccaacaacagcagccgctaCTCGAAGCGCTCTTCCATAGACAGTGGCATTAACATGGACATGCGGGGCAAGTCTAGCAAACCGTTGGCTCGACTGCATGGCAATTTCGAATCACATGATGCTTATGCTTTGGGTGTGGATTCACCGCTGGATTCGCTGAATGGGAACAATTGTGCAAGCTTATTATCCCCTCTACGAAAAATGGATTTTGCTCTGTGCGAGGTATCCACGGGCGAATCGAGTCCCATACACGACAAAGATATCATCGATTGTGATGACAATTCGACCAGCGCGACCGATGTAACCATTAATAATGAGCTGAACGATGCTGTCGTAGGGGATTCGGATGCAAAGGTACTCACACTGGCGGAACACATTATAGCAGCCATGCCGGAGCGGATTAAGAACGAAGCGGATGAGATGATGGTTTTGGGCAGCCCTTTGACAGAGACGCTCACCTCGGAGTCGTCGGCTCTGACTGACAGCTTTATGGATCCCTTGCTGGACTCTTTGCCGAATACGCATTTCGACAGTGACTTCAGTTTCGATTTCCATGATCATAGCTATCGCTATCATGATGTGAGCACACCTAGCTCTAGCCTAAGTCCAGCCAGCTCTGGTCCATTGCAATCGCCGGCCAGTTACTCCATACTGGGCACAGATCCCTCGGTTAGCTCACCCAGTCCGCCGCCATCGACAAAGCAGCTAACAGAGTTTCTGCATGCCAGCAGCATATCACAATATCCTTTTGAGGCGGACTTCTCTAAGCTGACGCTAACGGATACGGAACAGCGGGAGCTGTATGAGGCAGCCAAGTGCATACAGAAGGCATATCGTTCGTATAAGGGACGCCAGAAGCTGGAGGAGCAGAACAAGGAGCGTACAGCTGCCATTGTTATACAGAACTATTATCGTCGCTATAAACAATATGCCTACTACAGGCAGATGACCAATGCGGCGCTGGTTATACAGCATGGTTATAGATCCTATAGGCGTAACAAGCGCTTCAAGAAGTCCCAGCATACGCCAAGTGGTCTGGGCACTGGCAGTGAGCATGGCAGTGTTAGCAGCAATTCACAGTGTCTGTCGAGCTTCTACGATCACTACAAACAggatcaacagcagcagattgAGCTCAGCTCACAGCCCAGCACACCCAAGGAGACGAGTCCATCGGGTCCGCTCAAACGTACTTACTCACAGTCTACACAGAATCAGGCTGCCagaaaaatacaacaattcATGAGACAATCACGCATCAAActacagagagagcgagccgAAAAAGAGAAGCTGGTGCACCAACGCAGGGCGGAATACCTTCAAAACTTGCAGTATCAAGGGCAGCAGGAAATGGCAGTTTGCCATAATGATAACAGCACTCAGCTTGATGGCAATCACAATCTGCAATCACAAATACAATCCAATCAATGA
- Protein Sequence
- MGGPSKWHEGDVKVVKGHLEIAAILISFDKHSEWQSKEVKTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSTVNSDEDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGDAACADGKTCTHPVMRRSGILKSMAEKRANDAYSTHTGATGTPNVVVASKLYSRWSERHRQREAPLHLDNPHQYHNATQQLPQESAIKFQIIPQQQQQQQQQADSNYQQQYRGANQLLATRSNLIIHQQQQQQQQQQQQQQQQQQQHYQQQQQQHMNLQRFVANQSNPNHNHSNHNNSNNNSSAHLNHRLQIANTTITATNREAAATTTATVSNAASNVMDTEVIETQSQQLTANKINHNHSNNCSSSNKQLTAATTTAAAAQTNNELNVVNNNVTSSNNFIYNQQQQVNNSSSSNSHQQQQQQQQQQQHYYKLQQTTVVAATTPSSSSQQPPVEAMCMSPEHHSSNGGSSSSNAHNNNQPTTTTSVAVAAAATTSSAGNTPSTSATSSTSSSLQSIIDGNQQQQITTTTATTTSGAAAAAANCDNLMSANALAELELGSNEQQQQQHIAGSSYNNNSNNSVNNQATEANIHNGCANYNASSDNSSQISASDDSSNNLSNSNNTNNNNSNNDDEPQAETMSFFNETLDLSHEDIQRTLIANMPYGNTATVAAAAAGTVTATPVATAAITAAIGNSIAKPPQTEQSQGEDEDAVDVFANLDAFDMLVEFPELDLDDKQALSNSALEQEQTHAAASSSSSSYLSSDSTQRKLHNICDFSPEWSYTEGGVKVLVAGPWTSDGGCYTVLFDAQPVPTVLVQEGVLRCYCPAHEAGLVTLQVACGGFLVSNSAMFEYKLSLLADAPFDASSSNDCLYKFTLLNRLSTIDEKLQLKVENELATDQTSLCLEPNFEEKLVAYCHKLMKHTWCAPSTIATWSVGLRGMTLLHLAAALGYAKLVGAMLNWRSENPHIILETELDALSQDVHGFTPLAWACVRGHLECTLLLYKWNHNALKIKTQAQQTPLDLASLKGHKHLLAQLCRLEKERCRKPHPRGGLANLSMNLSIDSASEEAAYSGYELELQRRHDGVFLRPVAFHSNQSPPNNSSRYSKRSSIDSGINMDMRGKSSKPLARLHGNFESHDAYALGVDSPLDSLNGNNCASLLSPLRKMDFALCEVSTGESSPIHDKDIIDCDDNSTSATDVTINNELNDAVVGDSDAKVLTLAEHIIAAMPERIKNEADEMMVLGSPLTETLTSESSALTDSFMDPLLDSLPNTHFDSDFSFDFHDHSYRYHDVSTPSSSLSPASSGPLQSPASYSILGTDPSVSSPSPPPSTKQLTEFLHASSISQYPFEADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQKLEEQNKERTAAIVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYRRNKRFKKSQHTPSGLGTGSEHGSVSSNSQCLSSFYDHYKQDQQQQIELSSQPSTPKETSPSGPLKRTYSQSTQNQAARKIQQFMRQSRIKLQRERAEKEKLVHQRRAEYLQNLQYQGQQEMAVCHNDNSTQLDGNHNLQSQIQSNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01327876;
- 90% Identity
- -
- 80% Identity
- -