Laer004101.1
Basic Information
- Insect
- Liodrosophila aerea
- Gene Symbol
- bab2
- Assembly
- GCA_035045005.1
- Location
- JAWNNL010000546.1:90725-92926[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-10 6.3e-07 29.1 0.0 1 44 419 462 419 463 0.91
Sequence Information
- Coding Sequence
- ATGGGTGGACCCACGCCAGCTGGTGCGGCGAGTGCTGGTCCTGGTCCAGAGGGGCAAACTTATTGCCTGCGCTGGAATAACCACCAAACGAATCTGGTCCAGATTCTTCACGCACTCCACGAAGTGGGCAGCTATGTGGACTGCACTCTGGTCGTGGACGATGAACAGTTCAAGGCACATCGCGTGGTGCTCGCCGCGAATTCGCCATATTTCCAGGCCATATTGCAAGATGTGCCACAGGATCAATGTAGCATCATTCTGCCGGGTGTTAAGGGATTCGAGATTGCGGCATTGCTGCAGTACATGTACACGGGCGAGACTACAGTGACCAAGAGCCAGGAGCCGGAAATACTACGCACCGCCAAGGAACTGCAGGTCAAAGGTCTCTATGATAATCTCATGAAATTCAATCataaagcagctgctgctgctgcagctgcggcagAAGAGCGTTCACAGAGCCAACAGTTCCAGGGCAGCACtggtcatcatcatcaccaccatcaccagcaccagcaccagcaccagcactcAGCACCCACATCCAGTTCAAGCAGCAAGCCACACAATGGTGCCGATGGCGCCTATGGCCAGCATCACCACAGTGGCCATCATCATAATTCCTCTTCATCCGTGATCTCAACGTCCACGCACATATCACCCAGTGCCGCCATCTCCAGCAGTTGCTCGCCACCTCCACCGCCATTCGGTGCCTATCAGCCGCCCTACTCCAGCTTTCCACCGTCCTCTGGCGTGCCCCTGCATATACCCGCTGGTGAGGCCCCATTGACACCCACCCACTCGACACCGCATCATGCTGCTGCCGGCGAGAGTGGCCAGTGGCCACTGTCgccctctgctgctgccgccgcaaTGCTCAATTCGGTTTACGAGTCCGCTGCAGACATGAATCCTCTCAAGCGCAAAAAGCTATCAGCCATATCAAGCATGCTGCTCAACTCCACACGAGACACACCCATATTGCGTAATGTTTTGGCGCAGGCAAATCCAGCGGACTCATCCCAGCCCAatccgctgctgttgcctggcGTTAAGAATCCCGTAGAGAAGACTCCCACCCATCAGGtaggcagtggcagtggcagcgctGCCGGCGCTGGCAGTCACAGTTTCAATGGCTCCGACTACGGTGGCGACAAGGAGCCGCTATCACCGCACACAGATCGCTCCTTCGACGAGGAGACCAGCGGTCCAGGTGGCAAGAAACCGGAGTGGAAACGCTACAAGCAGTACACCCGAGCCGACATGATGTGCGCCATTCAATGCGTGCGCGAAGGCATGAGCGCTCTCCAGGCCAGCCGTAAGTTTGGACTGCCCAGTCGAACTCTTTACGACAAGGTGCGTAAGCTGAACATCACCACGGGCCGTGGCACACATCGGACGCCCAAGCGCAGTCCACCGGGCGTGGGTGCTGGCGTGGAGTCTTCAGCAACGTTTCCATACtccgcagccgcagcagctgctgcagcggcgcACAACTATGGGCAGACAGAGCTGGAACGCGAACAGAAGGAGCACATTCAGCTGAgtgctggcgctggcgctggTATTGCTTCTGGCGGTGGTGGCACTGGTGGTCACCATGGCATGGCGCCCACTATACCacattctgctgctgcactgctgGATCATGCCTTTTTGCAGCAGGCGCTGGAGAACCGTGGCGGTGACATTGCCGGTCGAGAGGCGCTGCATGCCATGGCACTAGCAGCGGCGGCGCATGCGGCAGCCAATCGCATGTCCAGCAGTCCACCCGATTCCAATGGTCATGCGGCACGTTCACCCGTGCATTATGGAGAGCGGGAGGAGGCGCTGGAGAAGCATGCACAAGCTATTATCAAACGTGAAGCCATGGAGGAGGAGCGTGATGCGGATGACGAGGATGATCACGATCAAGTGGAGGATCTATCGCTGCAGCGCAAGGAGCGTCCCGAATCACCCTATACCCCAACACCACCTCAAGCTGCCGCCTCGCCCCTAGACAGCCCCAGTGTCATAATGCACTCGAATTCCGCAACCGTGTCCACAAATGGCAGGGAACCGGAAGACGAGGTGAACGACTATAGCGAGGCACCCTCGCCTTCACCACCACCGCTACCAGCGCCAACTGCCTCCACCGTTGAGATGGGCCTGAAGCGTGAGCTGCTGAGCAGCGATGAGGCTCAAGCGCGCACCGACTGA
- Protein Sequence
- MGGPTPAGAASAGPGPEGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFKAHRVVLAANSPYFQAILQDVPQDQCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHKAAAAAAAAAEERSQSQQFQGSTGHHHHHHHQHQHQHQHSAPTSSSSSKPHNGADGAYGQHHHSGHHHNSSSSVISTSTHISPSAAISSSCSPPPPPFGAYQPPYSSFPPSSGVPLHIPAGEAPLTPTHSTPHHAAAGESGQWPLSPSAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNSTRDTPILRNVLAQANPADSSQPNPLLLPGVKNPVEKTPTHQVGSGSGSAAGAGSHSFNGSDYGGDKEPLSPHTDRSFDEETSGPGGKKPEWKRYKQYTRADMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGVGAGVESSATFPYSAAAAAAAAAHNYGQTELEREQKEHIQLSAGAGAGIASGGGGTGGHHGMAPTIPHSAAALLDHAFLQQALENRGGDIAGREALHAMALAAAAHAAANRMSSSPPDSNGHAARSPVHYGEREEALEKHAQAIIKREAMEEERDADDEDDHDQVEDLSLQRKERPESPYTPTPPQAAASPLDSPSVIMHSNSATVSTNGREPEDEVNDYSEAPSPSPPPLPAPTASTVEMGLKRELLSSDEAQARTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00802934;
- 90% Identity
- iTF_00901586;
- 80% Identity
- iTF_00901586;