Laer001679.1
Basic Information
- Insect
- Liodrosophila aerea
- Gene Symbol
- kn
- Assembly
- GCA_035045005.1
- Location
- JAWNNL010000237.1:86421-126943[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-233 3.1e-229 762.3 0.0 42 385 91 462 62 466 0.98 2 2 5e-07 0.0098 14.3 16.6 425 541 468 582 464 586 0.57
Sequence Information
- Coding Sequence
- ATGTTCGCGCCGAGAAGAAGTGCGCGTGTGGCCGATATCGAAAGTGCGAGTCTCAGTGCCACATTGGTTAAAATGACAGCGGGCTTTCATTCCGTGCATTCAGCGACGGCAAATCAGaatcacacacacccacacgcacactcgcacacacactcgcacaccgcacagcagcacacacacaatcagcagcagcaggagcaacaactCATTCAGgatcacaatcacaatcaaacACTGAGCAATACTAACAATAAGCTAATGCGCTGTGATATGAGCCTGGGCATTGGACGCGCCCACTTTGAGAAGCAGCCGCCCAGCAATTTACGCAAGTCCAACTTCTTTCACTTTGTGATTGCGCTCTACGATCGCGCTGGCCAGCCCATTGAGATCGAGCGCACCGCCTTCATTGGCTTCATCGAGAAGGACTCTGAGTCGGACGCCACCAAGACCAACAATGGCATACAATATCGTCTGCAGTTGCTCTATGCCAATGGCGCTCGACAGGAACAGGACATCTTTGTCAGACTCATCGACTCAGTGACCAAAGCGGCCATCATCTATGAGGGTCAGGACAAGAATCCGGAGATGTGCCGTGTGCTGTTGACGCACGAGGTGATGTGCAGCCGCTGTTGTGATAAGAAGAGCTGTGGTAACCGCAACGAGACGCCATCGGACCCCGTCATTATTGATCGCTTTTTCCTCAAGTTTTTCCTCAAGTGTAATCAGAATTGCCTCAAAAATGCTGGTAACCCACGGGATATGCGCAGGTTTCAGGTTGTCATCTCTACACAAGTGGCCGTGGATGGACCACTGCTGGCCATATCGGACAACATGTTCGTGCACAACAACTCGAAGCACGGACGCCGCGCCAAGAGACTGGACACAACGGAAGGTACAGGCAACACATCCCTGTCCATATCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTCTATCCGCCGCTGCCAGTGGCCACGCCCTGTATTAAGGCGATATCGCCCAGCGAGGGCTGGACAACAGGTGGCGCCACAGTGATCATTGTGGGGGACAATTTCTTTGACGGCTTACAGGTGGTCTTTGGCACGATGCTGGTGTGGAGCGAGCTGATCACATCGCATGCGATACGAGTGCAAACACCGCCACGTCACATACCCGGCGTAGTCGAGGTGACGCTGTCCTACAAGAGCAAACAGTTCTGCAAGGGGTCACCCGGACGCTTTGTCTACGTCTCACTCAATGAACCCACTATCGACTATGGCTTCCAGCGCCTGCAGAAGCTTATACCCAGGCATCCAGGCGATCCGGAGAAACTGCAGAAGGAGATCATACTTAAGCGTGCCGCCGATCTGGTCGAGGCGCTCTACTCCATGCCCAGATCCCCGGGCGGCTCCACCAGCTTCAACTCGTACGCTGGCCAGCTGGCGGTGAGCGTGCAGGATGGCACTGGCCAGTGGACAGAGGATGATTACCAGCGCGCCCAGTCGAGCAGCGTCAGTCCACGCGGCGGCTACTGCAGCAGCGCCTCCACGCCACACAGCTCGGGCGGCTCCTATGGCACCTCGGCCACCGCTGCCGTTGCGGCCACGGCGAATGGCTATGCACCCGCTCCCAATATGGGCACGCTCTCATCATCGCCCGGCAGCGTCTTCAATTCCACCTCAAGAGTCAGCAGCTTGAGCTTCAATCCATTTGCCCTACCCACCTGCAACACACAGGGTTACAGCACCAGCCAGTTGGTGACTTCCaccaaataa
- Protein Sequence
- MFAPRRSARVADIESASLSATLVKMTAGFHSVHSATANQNHTHPHAHSHTHSHTAQQHTHNQQQQEQQLIQDHNHNQTLSNTNNKLMRCDMSLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKAAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTSFNSYAGQLAVSVQDGTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGTSATAAVAATANGYAPAPNMGTLSSSPGSVFNSTSRVSSLSFNPFALPTCNTQGYSTSQLVTSTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00580491;
- 90% Identity
- iTF_01055013; iTF_00505190; iTF_00605361; iTF_00507402; iTF_00522741;
- 80% Identity
- -