Basic Information

Insect: Liodrosophila aerea
Gene Symbol: JARID2
Assembly: GCA_035045005.1
Location: JAWNNL010001293.1:123333-131353[-]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6.6e-22 1.4e-18 67.1 0.0 6 89 1867 1948 1862 1948 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6.6e-22	1.4e-18	67.1	0.0	6	89	1867	1948	1862	1948	0.92

Sequence Information

Coding Sequence: ATGGTTGTCTCAAAAGACAACAAGCGTCGCCGTAAGGAAACGGAGACACCGCCAACGTCATCGTCGGTGGCAGCGACAGCCGCCACAGCGTCAACAACTCTGGCCGTGGAGTCATCACCAGAGATGCCTAAAAGAACGAAGGTGCAGGCACAGCGCAAATTCGCCCAGGGCCAAAGTGCGCCCAGCACAGCGGGGGCATACACTGCTGCCAgtattgcagcagcagcagcagcgggcaGCGGATCAAGCGGACCGAGTACTTCAGCAGACAGTCATCAACCACCGATTGATATACTACCGAATAAGTGTCCGAAGCCACAGGACTTTTTAACGTTCCTTTGCTTTCGCGGCACGCCCGCCCTGCCGGCCCACTTGGACTACATGAATCAGGGAAAGTCCAAGGCCAACGAAGTCCCGCCCAGAAGCAgtgacaataacaacaagaagaagaacagcagcagcagcaagaagaaaCGTGGCAGACCCTCCAAAACGGGAAAAGTTTTAgacgagcagcaacagccacagccagcgGCAGCTGATAAAACATCCAGTGATAAAGTTGAAGCAGCGACGCCTCCATTGCTGCTGGCGGGAGCAGTGCGTAAGCGCGCAGAGGTGATAACTGAGGGCAATAGACGAGGCGCCAGACGCACTGAGACTCTCAAGCGACGTTCCAATCGTTCTGGCAACAAGGATCTGCCAGAGGACGATGACGAGCAGGAGCCTGAACAACAGCGGCATGATAAAGACGTCGccgacgaggaggaggatgatgaagatgaattCTTTTCGGCGCATGATGCTAGTTCTCGCAATGGTGGAGCTGCAGATGAGACGCTGTCCAAGTCGGAGACGACGCAAACGAATGTCAAGCGGGGGCGGACAAGAaaatcagctgctgctgattcgcCAGCAGAAAGTGCCAGCACGAAAGAGAAGGGGCCGGTGAAACGCGTACGGCAACGGGAGTCACCCATATTTATACCCTCACCCGAATCTTCCGGTCGCATGACTAGACAGCGAGCTTTTTTTGAGCCAGTCAAGGTGTTGCCCAAGGAGGAACCACCCGAAGCGGACAAGACTGAAGCGAAGCCAGAAAAAAAGCAGTCGGAGTCGAAGAAAACAACTGATGCCGTTAataagctgcagcagcagcagatcagCAAGGAGAAGACCAACTCCAGCATTTATGCCAAAGATGCtgccaaacagcaacagcagcagttggagaATGGAGGCACTGCCACAGCATTGGCCGCGGAGCAGCAAAAGGGTCTAAATGTCTTCGATTTTAGCTCCGATGATGAGCAGCCCCTGGCCAAGGCCATAAAGCTTAAAAAGGGCGCAAAGAAGAgtcccgcagcagcagctcctgcCACCAGTGCGCGTGGTCGTAAGTCCGCAGGAGGATCTGCAAAAAAGTCTCAACAGCAGGCAgaaaaggaggaggagaaggtaGTGCCAGCACCAGTACCATCCGAAGAGCCAACGAATAAAACGAAACGTGGCAGAGCGTTGAAAAAGAAAGCCGAAGTTGAGCCTGAAGCGGAGGAGGAACTGACGCCGCCCACGCCCAagaagcaaaacaacagcagtagcatcaATGCACGTCCAGCGCGACGACAGGCGAAAGCGAAAGCCGAACGCTCCTTGAGTCCTCCTCAACCCAGTCCACAGCGGAGCCAGCGACCATCGCGGAAAACCAAGGAGGCGGCTGCCATCTACATGGGCATCATAGGGCATAAGCTGCAACTGGCGGATGACGAGGAGGACGATCTGTCGCTGAGCAGCTTTCCGGATATACCCAATGTCAAGCAAATGgagaaaatggaaaaggaGATGAAGAAAAACGCAGCGGGCAAAGCAGCGGGTAGCACAGCAGagacaacaactgcaacagacacaccagcaactgttgcagttgctgagCCAACGCCGTCAGAGCCAACAACTAGCAGACGCGGGCGACCACCCAAGCAGAGCAAAGGtgctgcagcaggagcaagcacatcagcagcagccgcagcagcagcaacagctacagtaAAGCCTCAAATTGAGGGCATGTTGGTAAAAAAAGGCGCACTGGCGCTGGCTAAAGCCAAGTccgaacagcagcaacagcagcagcagcaacagaaagtCGATTCCGATGCCGAGGAGGATTTTCTCATCAACGAGGAGCTGAACGAAACCAAGCGAAAGCTGGAGAAGAGTTTCAGCGACTCGGATGATGAGCCGCTGGCCATTAAAGTGCCCACAGGAAGCACGACAGCAATagctgcggcagcagcaacaacagcagcggcaacagcagcaactacaacagcagcagcagcaacaacaacagcggcaaccgCCACCACAAGTCAAGTCAAAgccagcaacagtagcagcaataaagcagcagcagcaacaactacaattgcAGATGTAGCCgcttcagcagcaacagttgccacaacagcagcaacaacaccagcatcTAGAGCCATGTCAACAGCATCAATAGTCAACAGCACGCCAgttaaacagcagcagcaacaggcaccaCAGCCTCAGCAGTTGTCCCATCAGCTAGGCGCTGTTGCTaccagtgccacgcccaccacgcAATTAACCATGTTGCCACTCACCACCAAGCCCACAGCATACTCTATATCTCCGCCCAGCTATGCgagcgctgcagcagcagcagcgctgaaAACAATGGAGAAGAAGTCACCAGTGCCCACATCCAAGATACTGAATGTTCCAGCAACGTATGCCCTGCCAGGAGCAGCACAGggattggcagcagcagtgggagCTGTGGGTTTTGTAAAGACCTCGTCGTATTTGCCGCAGGCCTCGCCGCATTATCACACACCTTATGTGCGGCCAGCAGCGTTTGCCGCTGGCAATAAGacaccgcagcaacagcaacagacaacggcagcagcaacattagctaccacagcggcagcaacaacagttgtcTCGCCGCTCAAGTATCAAACACCGCCCACTACGTATCCGCCGCCCATTGAGGCGTATCAGTGTCCCAAGATTAATCCTAATTTTCTGACACCCAAGTACGATAGAAGCAGTGTGCTGCCccgcagcaataacaacaacagtagcagcagcaaccccaGTTTCACCACACCCACTGGCGGACGCACCACGCTGAGCAgcctggccacgcccactgtggGCAGTGCGACGCCTGGGAAGAGTGTGCTGACGCCACCTCTGATCGGTCAGAGTCAGACTCAAAGTCTTAACCTCAGTCTAACCTCGACGGTGGCATCCACATccgcggcagcagcagccgcagtgCAGGCGGCAGtggtgcaacagcagcagcagcagcaacaacaacaacagcagcaacaggcagcgACGGCAGTAACAACCACTCAGTCGGCGGCCagcaacagtaataataacaacaacaataataataataacaataataacaatacagATCCGCTCAAGGATGAAATTGGCAGCATACTGGCCCAGGTGACGCTCATGCCCAGCGCGGAAGAGTCGGGGAAAATCTTTGGCATTGCCAGCGTTAGTCTGGCGCAGAGTTCCGGTCCGGATAACACCAAGTGCACGCTGGGTAAATGCGGCTCCATACACAAGCCGGTGCTGGGTCCGGTGGTGCCCACAGAGATCTACATTGGGGATCAGCTGACGAGCAAGGAGCGGCGCAAGGCCAAGGTGAATATGTCGCACGAACAGATACAGAAGTGGCTCATCGAGTGCAGCTCGAATCCGGATGAGATACAGGACGATCTTGACGATGACTACGATGATAGTCTGCGGCCACAGCAATCCCAGACACCGCCGGCAGCCACGCGCGACGACAAGGAGAGCACCAGTTTCAGCAGTTCCTCGAATAAAACACGCGGTGAGCTGGGCAAGAGTGAGAGTGCCTGGTCAGCGAAGGGTCCATCGCTCAAGGCGACACCAGTGCTGGTGAGCACAGCCGTAGCTGGCACACAATCGGCCAATCGCAAGGAGCCGGAGGTAGAGGTGGAAACCTTGGACTATGACAAGTGTGTGACGCCCGTGAATCTCACACAGAAATCGCAGCTAGAGGCAGAAAAGAAACTGCCCGAGAAGAAGGTGAAaacgaacagcagcaacaccgcCAAGgcatcagcagcggcagcaacaatgccagcagcaatcacagcaacaccaacagcagcaagcaaGCGCAGtactgctgccacgcccacagcaaGTGCCACACCGCCGCCGCCTGCCAAGCAGAAAGCGGGAAATAAGAAGAATGCCTCGGCAGCAGTAcccagtagcagcagcacagcagcaacagttgctggcaaagccagcagcaacacgacAGCGACCACAGCTAAGCGTACGCCCATCTATCAGAATCAGAGCAAAGCcaaggcacagcagcagccacagctggaGAACCAcaccaagcagcagcagccaaagccTGAAAAGTCCACCACATCTATCTATGCCTTTGGTAAGGATGAggaggcagcagctgcaacagcagcagcagcaacaacagctgctgctcctactaAGCCCGCAAATCGTCGTCGTAATGCTGATGTAGAAACCACCGCAACGCCGCCTGCGCTCAGCGAGCGTTCTCCCACCAAGAAACGtgccgcagcggcagcagcagccactgcggTGCAGCTGACCCTCAGTCCAACGGACAAACTGGAGAAGCctaaggcaacagcagcagcagcacgaaatgccaagaagcagcaacaacagcagcaacagcaacaacccaTAGCTGCTTCAGCTGGCGGGGAATCAGATGCGGAGGGTGCCACCTTTTATATACCACTCCTGCAGGGGGCCAGCGCTGGCGAGGGTGGCATACAGGGTGTTGCCGTCAAGCTGGGACGAGAAGGACCCGATGGACCCAATCAGAAAGTGGTGATGCAGGCCACGCTGGTAACCAAGGCACAGATGGACACAAATTCCAAGCCGTTGCAAGACAATGAGCTAGTTAAATCGCTCCTCAATGCAGCAACAACGGGCAATGatgcggcagcaacagcagctgcagcaacagttgctagcaacagcagcctcAAGGCCAGcacctcagcagcagcagcagctgcagtggcGGCCACAAGTCTGGTGCGCATCAATTCCAATTCATCGTTGTACTCTGGTTCCGCCAAGTcacgcacagcagcagcagcagcagctggagcagcatccgcggcagcaactgccacagcaacaacagcagcagcagccaatgcatccgcagcagcagctacagcccTGGCCAAGAAGTACAAAGATGATACGCCCATTAAGATGGCGAACAACACTGCATTCCCGCGGCACGATGATCCCACGCAAATGGTGGAGGCGCCCATCTTCAAACCCACCGAAAAGGAGTTTGCCGATCCCATAGAGTTTATAGAACGCATCACCCCCATTGCAGCAAGGTTTGGCATCTGCAAGATTATACCTCCAGCTAGTTTTAAACCCGAGTGCCGCATCTCGGATGAGATGCGCTTCACGGCGTACAATCAGTACGTGCACAAGATGCTGCATCGCTGGGGACCCAGTGCCAAGGAGCTGAGTGCGATCAAGAAGTATCTGGCCACTCAGAGCATTGTGATGAATCATGCGCCATGGATTGGCGGTATGGAGGTGGATCTGCCGCGGCTTTATCATACGGTGCAGGAGCTGGGCGGACTGAAGGAGGTGATTGAGAAGAAGAAATGGGCACGTGTGGCCGAGGAAATGTGCATACCCAAGTTGGCACAGGATCGGGTGACTAAACTGGATGACATCTACTGCAAGTATCTGTTGCCCTACGATACACTCTCGCCGGCGGAGCGGCAGAAACTCTTCGATGAAGTCGAAGCGGATTGGGCGAAGCGTGAGGCGCGGGCGAGACGGAATGCAGATCGGTTTGTCAATAGCACAGAGAGCGTATCGAATGAGGAGGACGATGTGTCCACAGACGAGGACGAGGAGTCTGAGGAGGAGATCGATGGCGTCTCCATGGAGTGCATTGTCAAGGGACGCAGCATGCCACTAAGTCAGTTCTATCGCATTGCCAGAAACACCATGGCACTGTGGTTCAAGAGCACAGATCCCACTGTTAATGAGGTGGAGGCTGAGTTCTGGCGCCATGTGGCTGTACGCGAcagtcatgtgtgtgtgcattctGGTTCGATTGATAGCTCCTTCTGGGGCTACGGTTTTCCCAGTCCGGGACCCAAGGGCAAGGGCTCCAACTATGCGCGTCATCCCTGGAACCTCAAGGTTTTGACCAACAATGCTGGTTCAGTGCTGCGCTCCCTGGGACCTGTCATGGGTGTCACCGTGCCCACGCTACATGTGGGCATGCTCTTCTCCGCCTGCTGTTGGTATCGTGATCCGCACGGCCTCTCCTGGATTGAGTATCTGCATACGGGCGCCTCTAAGCTCTGGTACGGCATACCCGACGATCAGAGCGCCAACTTCCGTTCGGCTCTCACGTCGCTAATACCAACACATTGCCAGAATAAGACGATATGGTTGCCCTGTGATACGGTCATGGTACCGCCGCACATGCTCACCGATCGCGGCGTTTCACTGTGCCGCATCGAGCAGAAGCCCGGCGAGTTTATTGTGGTCTTCCCGCGCGCCTACACCTCCAGCTTGGCCACCGGCTATGTGGTATCGGAGAGTGTGTACTTTGCTACCATGTCATGGTTGGATTTGGCCAAGGATGACTTTAGAGACATACACGAGAGCTGTGAGCCGGCCATGTTCTcgctggagcagctgctgttcgCCTTGGGCTACGATCAGCGTGTCAATTCGGACACGCTGCAGCAGATGCTACCAATGCTGAACGAGGTCTGCGAGAAGGAATCGGCGGCGCGTGAACAGCTGAGGGCTGCTGGCGTTACGTCGACCGAGAAGGTGCAGTCGGAGAAGGGACAGAAGgcaaagaagcagcagcagccaaacaaGTCTATCGACAGCGAATGTGATCTGTGCCGTGCCAATCTATACATATCCATGGTGCGCACCGAGGAGGGCAACGTCTACTGTTTGCAGCATGCACTCAAAAATCTCAACAACGGCAACATTCAGGCCAAACAATGCAAACTGATTTACGCCTACAATGTGGATGATATACAGCAGCTGATAAGGCAGCTGCAGGAGAAGATTCAGCACAAGGCGAGCGTGAAGAAAAAGTAG
Protein Sequence: MVVSKDNKRRRKETETPPTSSSVAATAATASTTLAVESSPEMPKRTKVQAQRKFAQGQSAPSTAGAYTAASIAAAAAAGSGSSGPSTSADSHQPPIDILPNKCPKPQDFLTFLCFRGTPALPAHLDYMNQGKSKANEVPPRSSDNNNKKKNSSSSKKKRGRPSKTGKVLDEQQQPQPAAADKTSSDKVEAATPPLLLAGAVRKRAEVITEGNRRGARRTETLKRRSNRSGNKDLPEDDDEQEPEQQRHDKDVADEEEDDEDEFFSAHDASSRNGGAADETLSKSETTQTNVKRGRTRKSAAADSPAESASTKEKGPVKRVRQRESPIFIPSPESSGRMTRQRAFFEPVKVLPKEEPPEADKTEAKPEKKQSESKKTTDAVNKLQQQQISKEKTNSSIYAKDAAKQQQQQLENGGTATALAAEQQKGLNVFDFSSDDEQPLAKAIKLKKGAKKSPAAAAPATSARGRKSAGGSAKKSQQQAEKEEEKVVPAPVPSEEPTNKTKRGRALKKKAEVEPEAEEELTPPTPKKQNNSSSINARPARRQAKAKAERSLSPPQPSPQRSQRPSRKTKEAAAIYMGIIGHKLQLADDEEDDLSLSSFPDIPNVKQMEKMEKEMKKNAAGKAAGSTAETTTATDTPATVAVAEPTPSEPTTSRRGRPPKQSKGAAAGASTSAAAAAAATATVKPQIEGMLVKKGALALAKAKSEQQQQQQQQQKVDSDAEEDFLINEELNETKRKLEKSFSDSDDEPLAIKVPTGSTTAIAAAAATTAAATAATTTAAAATTTAATATTSQVKASNSSSNKAAAATTTIADVAASAATVATTAATTPASRAMSTASIVNSTPVKQQQQQAPQPQQLSHQLGAVATSATPTTQLTMLPLTTKPTAYSISPPSYASAAAAAALKTMEKKSPVPTSKILNVPATYALPGAAQGLAAAVGAVGFVKTSSYLPQASPHYHTPYVRPAAFAAGNKTPQQQQQTTAAATLATTAAATTVVSPLKYQTPPTTYPPPIEAYQCPKINPNFLTPKYDRSSVLPRSNNNNSSSSNPSFTTPTGGRTTLSSLATPTVGSATPGKSVLTPPLIGQSQTQSLNLSLTSTVASTSAAAAAAVQAAVVQQQQQQQQQQQQQQAATAVTTTQSAASNSNNNNNNNNNNNNNNTDPLKDEIGSILAQVTLMPSAEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTEIYIGDQLTSKERRKAKVNMSHEQIQKWLIECSSNPDEIQDDLDDDYDDSLRPQQSQTPPAATRDDKESTSFSSSSNKTRGELGKSESAWSAKGPSLKATPVLVSTAVAGTQSANRKEPEVEVETLDYDKCVTPVNLTQKSQLEAEKKLPEKKVKTNSSNTAKASAAAATMPAAITATPTAASKRSTAATPTASATPPPPAKQKAGNKKNASAAVPSSSSTAATVAGKASSNTTATTAKRTPIYQNQSKAKAQQQPQLENHTKQQQPKPEKSTTSIYAFGKDEEAAAATAAAATTAAAPTKPANRRRNADVETTATPPALSERSPTKKRAAAAAAATAVQLTLSPTDKLEKPKATAAAARNAKKQQQQQQQQQPIAASAGGESDAEGATFYIPLLQGASAGEGGIQGVAVKLGREGPDGPNQKVVMQATLVTKAQMDTNSKPLQDNELVKSLLNAATTGNDAAATAAAATVASNSSLKASTSAAAAAAVAATSLVRINSNSSLYSGSAKSRTAAAAAAGAASAAATATATTAAAANASAAAATALAKKYKDDTPIKMANNTAFPRHDDPTQMVEAPIFKPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHAPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNSTESVSNEEDDVSTDEDEESEEEIDGVSMECIVKGRSMPLSQFYRIARNTMALWFKSTDPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSFWGYGFPSPGPKGKGSNYARHPWNLKVLTNNAGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRSALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSDTLQQMLPMLNEVCEKESAAREQLRAAGVTSTEKVQSEKGQKAKKQQQPNKSIDSECDLCRANLYISMVRTEEGNVYCLQHALKNLNNGNIQAKQCKLIYAYNVDDIQQLIRQLQEKIQHKASVKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -