Basic Information

Insect: Liodrosophila aerea
Gene Symbol: grh
Assembly: GCA_035045005.1
Location: JAWNNL010001041.1:531125-569166[+]

Transcription Factor Domain

TF Family: CP2
Domain: CP2 domain
PFAM: PF04516
TF Group: Beta-Scaffold Factors
Description: This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.073 4.7e+02 -0.0 2.0 77 109 173 208 113 244 0.60

2 3 0.53 3.4e+03 -2.8 0.2 89 105 463 479 442 499 0.55

3 3 3.2e-63 2.1e-59 200.6 0.5 24 221 602 794 588 796 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.073	4.7e+02	-0.0	2.0	77	109	173	208	113	244	0.60
2	3	0.53	3.4e+03	-2.8	0.2	89	105	463	479	442	499	0.55
3	3	3.2e-63	2.1e-59	200.6	0.5	24	221	602	794	588	796	0.94

Sequence Information

Coding Sequence: ATGCTTCGCGGCATCAGCTATAGCTTGGACccaccgcagcaacagcagcagcatcagctgcatgagcaacatcagcagcagcagcaacatgttgctcaTTATGGCAGCCCATCGCCTGTGCGTTACTACGAACCAGCCAAGGACGAGGCAACAGCCTTGCcaccgcaacagcagcagccgcaccTGCCTTTAACTGCCGCGGGCCTAATGCAATCAGTGGCCAAcgagttgcatgcaacaccTCCCCCGCCACCGCCCATGGGCGACTCTAGTCACGCCACCGCCACCGTACCGATCTCCCCCGCCGCCAGCTATGCCGTTTACAGCTATTACAGGGatgcagagcagcagcagcagcagcagcagcaacaagcggAGGCTCAACAGCATCTCGTGTGGAGcaatgCGAACAGCGCCGGCAAACTGAATGGACAGACCACACCTATCGATGTCTCTGGCCTATcgcaaaatgaaattcaaggCTTTCTGCTTGGTTCACACCCCTCATCGTCGGCAGCCACAACCGGCGTGGTgtccacaacaacaatctcgaatcagcaacaacaacagcagcagcagcagcagcaacaacatcaacagcagcagcagcagcagcaacatcagcagcagcagccaccacaTCCCAGCGATATTGTTACCATAACCACAGCGGGGGGTGTGGGGAGTGCGGGCTCAATAGTCTCTGCTGccgtgcaacagcagcaacagcagcaacagttgctgagcATCAAACGAGAGCCCGAAGACTTGAGCAAGGACCCCAGCAAGAATGGCAGCATTGGCGCCGCGGCTAACGGTGGCGGCACCGTGATAACGCAAAAGATCTTGGCACAAATCGATAGCGATAGCGAttgcgataacgataacagtAGCAtcgcaacagcaactgcaactagtCCAGCCAGCAGCCCAACAACAGCCCTAGAGATGTATGCTACCACGGGCGGCACACAGATTTATCTACAGACCTCACACCAgcagcccaacaacaacagcaacagcagcaacaacaacagcagcagcaacaacaacaacatcggcggcagcagcaacagcaatggtgCGGTTGCCCTCCATGCACAGAGTCCCAGTCCGGGACCGTATATAACCACGGATGGTTACGGCATGTACACAACGACACGCCTACCGCCCGGACCCCCGCCCACCAGCACGTTCATAACGGAACCGTATTACCGTGAATATTTCGCACCGGACGGACAGGGGGGTTACGTCCCGGCGGGCACAGCGCGCAGCATCTATGGCGACGATGTGTCCGCCGTGACGGCAGCTCAGCCCGTCTATGAGGCTCGCTTCAGTAGTAATCCATTGGCCACAACCACAGTGCTTACCAGCAGTCACCATcacagtcagcagcagcagcagcagcagcagcagcaacaacagcagcagcaacagcaacaggattCTGTTAAGAATGGAGGGACGCCCTTGTATGCCAAGGCCATAACGGCAGCGGGTCTTACGGTGGATCTGCCGAGTCCGGATTCGGGCATTGGCACGGATGCCATAACGCCGCGGGATCAGAATCACATACAGCAGTCTTTCGACTATACGGAACTCTGTCAGCCGGGCACCTTGATCGATGCCAATGGCAGCATACCCGTCTCCGTCAACAGCATACAGCAGCGCACAGTGGTCCACGGCAGTCAGAACAGTCCGACCACGTCCCTGGTGGACACCAGCACGAACGGCTCCACGCGCTCGAGGCCCTGGCATGATTTTGGTCGACAAAACGATGCggataaaatacaaataccaaaaatCTTCACAAATGTGGGCTTTCGCTATCATCTGGAGAGTCCGATCAGCTCGTCGCAGCGACGCGAGGACGATCGCATCACCTACATCAATAAGGGTCAGTTCTATGGCATAACGCTGGAGTATGTGCACGATGTGGAAAAGCCAATCAAGAATACAACAGTTAAGAGTGTGATCATGCTAATGTTTCGCGAGGAGAAGAGTCCCGAGGACGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTTAAGCAAAGAATTCTGGATGCAGATACGAAGAACTCGGTGGGTCTGGTGGGCTGCATTGAGGAAGTGTCGCACAATGCCATTGCCGTCTATTGGAATCCGCTCGAGAGCTCAGCTAAGATCAACATTGCCGTTCAGTGTCTCAGCACGGACTTTAGCAGTCAAAAGGGTGTGAAGGGTCTGCCGTTGCACGTACAAATCGATACGTTTGAGGATCCGCGTGATGCGACGGTCTTCCATCGTGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGTGCTGAGCGCAAGACACGCGACGAGGAGCGACGCGCCGCCAAGCGCAAGATGACAGCCACAGGACGCAAGAAGCTGGACGAGCTCTATCATCCGGTAACAGATCGCAGTGAATTCTATGGCATGCAGGATTTGGCCAAGCCTCCGGTGCTCTTCTCGCCAGCCGAGGACATGGAAAAGAGCTTCTATGGTCATGAGACTGATTCACCGGAATTGAAAGGCGCCTCACCGTTCTTGTTGCACGGCCAGAAGgtggccacgcccacgctgAAATTTCACAATCATTTTCCGCCCGACATGCAGACTGATAAGAAGGATCACATATTGGACCAGAGCATGTTAACCAGCACGCCCATGTCTGACTTTGGGCCACCCATGAAACGGGGTCGCATGACACCGCCCACCACGGAGCGCGTCATGCTGTATGTGCGGCAGGAGAACGAGGAGGTCTACACGCCCCTGCACGTTGTGCCGCCCACCACCATTGGACTGCTGAATGCGattgaaaacaaatacaaaatctCAACAACGagcataaataacatttatcgCACAAACAAGAAAGGGATTACGGCGAAAATTGATGATGAAATGATATCGTTCTACTGCAATGAGGATATCTTCTTGCTGGAGGTGCAACAAATCGAGGATGATCTGTACGATGTGACGCTCACGGAGCTGCCCAATCagtag
Protein Sequence: MLRGISYSLDPPQQQQQHQLHEQHQQQQQHVAHYGSPSPVRYYEPAKDEATALPPQQQQPHLPLTAAGLMQSVANELHATPPPPPPMGDSSHATATVPISPAASYAVYSYYRDAEQQQQQQQQQAEAQQHLVWSNANSAGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSAATTGVVSTTTISNQQQQQQQQQQQQHQQQQQQQQHQQQQPPHPSDIVTITTAGGVGSAGSIVSAAVQQQQQQQQLLSIKREPEDLSKDPSKNGSIGAAANGGGTVITQKILAQIDSDSDCDNDNSSIATATATSPASSPTTALEMYATTGGTQIYLQTSHQQPNNNSNSSNNNSSSNNNNIGGSSNSNGAVALHAQSPSPGPYITTDGYGMYTTTRLPPGPPPTSTFITEPYYREYFAPDGQGGYVPAGTARSIYGDDVSAVTAAQPVYEARFSSNPLATTTVLTSSHHHSQQQQQQQQQQQQQQQQQQDSVKNGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYVHDVEKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQSMLTSTPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDEMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00476386;
90% Identity: -
80% Identity: -