Basic Information

Insect: Linnaemya vulpina
Gene Symbol: -
Assembly: GCA_963675445.1
Location: OY776280.1:69431545-69439878[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.021 2.5 9.9 0.0 1 20 1243 1262 1243 1267 0.91

2 8 0.09 11 8.0 1.6 1 23 1827 1850 1827 1850 0.96

3 8 4.3e-06 0.00051 21.6 5.1 3 23 1873 1893 1872 1893 0.98

4 8 0.00058 0.068 14.9 0.2 1 23 1899 1921 1899 1921 0.98

5 8 1.3e-05 0.0015 20.1 0.4 1 23 1927 1949 1927 1949 0.99

6 8 0.081 9.6 8.1 0.8 1 23 1955 1977 1955 1977 0.98

7 8 0.0044 0.53 12.1 0.1 2 23 1984 2005 1983 2005 0.96

8 8 0.0019 0.23 13.2 3.2 1 23 2011 2033 2011 2034 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.021	2.5	9.9	0.0	1	20	1243	1262	1243	1267	0.91
2	8	0.09	11	8.0	1.6	1	23	1827	1850	1827	1850	0.96
3	8	4.3e-06	0.00051	21.6	5.1	3	23	1873	1893	1872	1893	0.98
4	8	0.00058	0.068	14.9	0.2	1	23	1899	1921	1899	1921	0.98
5	8	1.3e-05	0.0015	20.1	0.4	1	23	1927	1949	1927	1949	0.99
6	8	0.081	9.6	8.1	0.8	1	23	1955	1977	1955	1977	0.98
7	8	0.0044	0.53	12.1	0.1	2	23	1984	2005	1983	2005	0.96
8	8	0.0019	0.23	13.2	3.2	1	23	2011	2033	2011	2034	0.96

Sequence Information

Coding Sequence: ATGAAATGTGGCGAAGTATTTACTTGGATGTGTGCGGGTGAATTGTATGCCGTTGAATGCAAATTGTGTGAGGATTGTCCGTTGTGTCCTCTATCAGAGTTTCCACAGCACATGGACATTTGGCACACCGAATGGCAAATAGCAACGGTAAACCATGAGGACAATAATGGACAAGAACATTTCACagatgacgacgatgatgatgattataatgatgatgaagcacaacaacaaaatgctttaaataacaattacgATTGCGATCGTGGCCTTGAACCAGCCCATGCGTTACAAGACGACAGAGTAACAAGCCAACAACAAACTAAAGAAGTTATAGAACCTTTTGAACAGGTACTAATTGAACAAGAAGTTGGTATACAACCAACACATACcaacgaaaatatttatgaagaaGAATATGTGGAAGATGTCAACCTGCCGGCAGCAGATAACAAACAATTTGTAAttgaaaacaaacagaaattaaCTGTCAATACGAATCCAATATTACAACTCTTAAGAAATGAGCAGCGAACAGCCACTAACGAAGTAACAGAGAGCAAAACAGAAATAACTGGAATTGAAACTGAAAATCATATGGTTGCTAATTTCAAAGAAAGCAAAAGGAAACTAAACGAAAACGCAAGcgaattaattaaaactgatttaatgCCATCCTATACTGGTGGAATGAAACAACGCTACAATAAAATGGAACTCATTGAAAGCGAAACAGAGCCAAATGAAATGGCAATAGAAGGACATGAAAAGGGGAAacagacaaaaatatataacaagttACAAAATAAGGATAACGAATGTGGAAGCTGCTCAGCAATTAAAACAATTCTCACAACTGCTAAAGCAGAAACACATGAAAATGAAACATTACAAAATCATATGGGAGCACAACTCAACGAACAGAAAAATTTCGCCAGCGGAAGTAGTGAAAACAATTATGCACATTTGAAGTTTAATGAAACAAAACGAAgcgctgaaaaaaatttagaaaaaagcgCAAAGTTTTGCTTAGAATTACAACAagataaaatgaaaatgaatgccAAAGAAACAAATGAATATGAAACACAAAATCCAACATTCCTTGATTGCTTACAAAAATCTGcggaaataaaaggaaaaaaagaaagcaaaagagATACGAATGAAAATGGAACAAGTGAAATAGAGAAACATGAAAACTTTGAATGCCTTCAAAACTCTTTAGAAGTCAGGCAGGAAGCTAATAAAATCTCGAAAATGCCTTCCAACGAGAATGAAACATATGAAAAACTTCCAATGATAGAAATGGAAAATATGGAACACGATAAAACATCAATTTGTTATGACGTACAAGACTCACGAAAACCCGGAAAATCGTGGGAAAGTTTCACCAAAAATTTCACATATTCCCCAAACTTTAAACACTCAAATAAAAAGGAATTGCAAGTACAAGGAACGAATGAAAATGAagcaactaaatatataaaacggaGAAGCGTTACAAATGGCAGAGAGAGGAAACGCAAGGAAATAAGACAGCGCGATGGAGGAAAGTTAATCAAAatcgaaacaaaaaatttcgcaGGATTAAAGAATATCCTTCACAAATCCTCAAACTTAAAAGCACTCAACAGCAACAAACGTTTAAGCGATTCAAATAGAGAgaatgaatttaaaagaaaagtgaGCCATTATGAAAATGAGAGAGAAGATTCTTCGAAACGTTTGAAAACCTGCTACTCCACAAGAATTAAGAAACGAAAGAAGATACATTGGAAACGGTGTGCATTTAAGAGGCCTTTGAAGGTAaaattttactacttaaaaaatcattttgaaaattccaAAGGAACCAGAAGAAGAAGCACCGAAGAAGAGGAATACTCAAGTGAATTAAATGTATCTCTGGCCAATGAAAGTGAAATGAAAACTTTATGCTACGAAGGCAAGAACAGAGATTCGCTAATTTTCAAAGAGAAAGTTaatggagttgttggccaagaAGAAAGAAAACCACTTCCGAGCTTAAGTCCAAAAGAGGACAACGGAAAAGGCAGAAAGCAAACTTTAGCTACACAATTTTTCTCAAGCTTCTCGGGAAACTCTGAGAAAGTTCAGCTTAAATTTCAAGAGCCACAAACTGGCACAGCCACAAAAGTTGAGGGAGCTTCTGAAACGTTATACAAACTGGACTATAATATCTCATCACAGTCCTTCCTTGAAAGAGTTCCAAGGAATTCAAATCACCAGATGTCTTCCTCTGGTAAAGGCATCCAACTTTTTAAGAATTCCGAAAATTCTGAGGAACATGATCCCAACCTACAAAAGAGATCTGCGAAGAATCCGGGAAATTCTGAGAAATCCGAGCATAACCTGACTTCTGATCAACTCAATTTGCATGAGTCTTTCTCGGGAAAATTTACGCAACATAAAGGAACTTCAAGGAACTCAGAATATTACGAGAACCATCAGCATATCGACACTTTTGACGGAAAAGGTAACGGCCCTACTGTAACCAGTTTAGGAGCAGAAATTCCAAAGAGTTCAGAATATTCACAGAAGCATGTCGTTCCTTCTGATCAGTTTAACTTATGGGGGTGTTGCTCTAGACCAGACAGTCTTAGAAATTTAAACACGCAACAAGAAGCAGTTTCGAGGACTTCggaaaattcttataaattagAGCACAGCGCCACTTATGATCAGCTTAACCTGCAGGAATCTTCCTCCGGCAAAGACAGGCAGCATGAAGAAGCTGCAAAGAGTTCAGACAAATCCGAAAAGCGTGAGCATAATCCCAATTCTGATCAATTTAACTTTCGGGAGTCTTCCTCTGACAAAAGCAGTTATACGACTCTAAACCTGCCACAAGAGGGCGCTTCACAGCAAACCTGCACTTCCTACCAGCAGCATGACTTGCAGCAATTTTTTTCAGTCAACATCACGCAACATAAAGGACCTTCAAGTAATTGCCAGAAGCTGGAGTCTTTCTGTAGCAAAGCCAATTGTGCAACTCCAGGTATAAAACCTTCCTCGCCACTTTCACCCAAAACCGAAGAAGAGCATTTTGAATTCTACGAACCCAAAGAGAAACTAAATGAGAAACATATCAgacatttaataaaactctatCGGGAACATCCTCGACTGTGGGATCAAACACATTCCGAATTCTGCGAGCCCCCGGAATGCCGCAAATCCTGGCACACCATCACCCAGCAGTGGAATGAATTCTGTCAGCGAAAGTTTACCATCGCCGAGGTACGCATACGAATTTGTACGCTGTGCCAACGTTTTCTACAACAAAGAGATCGTTTGGCATCCGAGGGTGAAGTAGATGAGAGCGTCAAATTTCCCTACTACGAAGAAATGCAATTTCTGGAACAGCACAAATCTTTGCAAAGGCGACGTGAGCTGTACGACCAGCAGAAtgacaaaatattggaaatttacCAGCATTTTCCCGCACTCTGGCATGTGGGCTTTTATAAGCTGACAAAGCCGGCAGAAAGAGAGCAGGCCATTGAAAGCATAAGCAAAGCTTTGAGATTATTCGATATAAATTTATCCTGTATGGCCATCCGAAAGCGATTGCGTTCTCTTAGGAAATGCTATCGCTTGGAGAAAATACGTCACCTGCATGCTCAGGTGGAAGAAACAGCCTTCGAGTCTAAGTTTCAGCATTATGAGAGAATGCATTTTTTAGATAAACATATAGAACCGTTTGCTTGTCGTGTTTGCGgaaaaatctttgaaaatttgCCAGCCTATCGGCAGCATTTGGCGGCCGAGGGTCATGGTAGTGTGGGGATGGAAGATCCAGCGGTGGTTGTTAATGCAGAACTCGGTTTCAACGAAGAGTCCTGTGAAGCTCTTGTGCCAGAGAATAGTTTTGAAAACGGTTTTGAAACCGAAGCCTTTGCTATCTCTCCCACTGACAATGACATGCAGCATTTCTCGGAGTCCGAGGATTCTAGAGATATTTTACAAAGATTTACGCCATTTTCCTCTAGTCCAGTTCCAAGCGGGAGCATGATAGCAACACCTGCGCACCTGCAAGGCTCAGAAACTCCTTCTTCTCCTATACAAGAAGTTGTATACTTTCCCTTGGATACCACCAGCGAATCCATTATTGATTCTTTGCATTTCGAAGAACAACTTATAGAAGAGATTATGGAAAATGTTCCGGACAGCGTTATCTTAAGCCAACAGGGACTGGATCAGttCATTAACGGCGCAGGACGCTGTGATGAAGCCAGCCTGAACTTCGATTTGACTGTCAAGAATTGCAGTCCGAGTCTTGTTCATGCAGAAAACTCTTTTATCGTAGAACATCCGGATATTGTAGCCGATCAAAGCGCCAGTATTTTGAGTCTATCGCCAATGGCGGAATCGTTTACGCCTcttcaattttataatgaaaattcgTTCATTATAGAACATCCTGATATTGTAGCcgaacaaaatgtttgttttctaAATGAGGAAACAAACGTGGAGACTGTTGGTGCTGCACTTTTGCATGGCGATGGTTCTGCTGCTGTACAGCATTCTGAGGCTATACCCTTGGCTATTGATAAAGCTTTAGAAGTTTCTAGTCCATATTTAAGTGATCAAGAGACGTGTTCATTTAACGACTTGGAAGATCAAATCGCAAAATTGTGCAGTACAGAAAATACCTCCCCAACAGCTCCGCTCATGGTGAAAATGCAATGCCCCGGCTTTTCTATTGATGTCAAGCTAAATTCTAGTACTACGGAAACACTAGATGCTGGTAGCCTAAATGAATTTGATACCAATCTTATGTCTACGGCCGACACTTCCACCATACCCCTGCCCGATCatttaatacacaaaatgattGAGGTCTATCGAAAATATCCACAACTTTGGAATCCCAATCATTTGGATTTCAATTCACGGACTTTAAGGCGTGAAGCCTGGTGCTCACTAACGGCTGAATTCAATGCTGCCATGGGAGGAAAGCCTATATCCTGGCGTACCTTGCATCGCAAATTAACGGATTATGCcaaatattataagaaattaataacagaGCAGGAGGACTATGCGAGGGTGGTAAATAAATGGGCGTTTTatgaagattttaaatttttggatgATGTGATCGACGTAAACAATGAACTGCAGCGCAGCATTCATCATCGTgatagtaattttaaaattatagatatttatagGACACTGCCCCAGCTGTGGAATACTCAAAATCCCGATTACAATAAACGCGGCAATAAGCAGCGCAACATTGAAATTATGTGCAATAAATTGCAGGAGGAAAAGAATTTGCAATTGACCACGGAACGAGTGAAAAGTCGTCTGATAGAACTGAGAACTCAGTATAGAACAGCTAAAAAGCAACGTCTCAAATgcttgaaaaacaaacaaaccttTTCCACCAACCAATTCGAATACTATGAAGCCCTAAACTTTTTGGACGACCACATAGACCCGTTTATTTGTGTTACCTGTAACATGGAATTTCAGAAACGAACAGCCTACAAGCAACACCTTAAGAAGGAGCACACGCAAAAGAGTGCCTCAAAAACCTCTTTGACTATTTTACCCCCTGAAGCAGATGTGGAAAATATTTGTCACATTTGTGGCATAAAATTTACCACACGCAGCAATCTGAGGCATCATCTAAGACGTCATGAAGGCATCCGAAATTATGCCTGTACCCTGTGTCCGATGAAATTCTATGCGTCGTACGCTTTGAAAGTTCACATCAGATCGCATACGAAGGAGTGCCCCTATACGTGCGATAAATGTGGCATGTCTTTTGTTAGTGCAGGCAAATTGAATCAGCATGTCAAacgacattttaataaaaaagattttcaatGTGATTTTTGTGCGAAGGCGTTTTTTACGGCTGTCGAAAAGGACCGTCATGAAAGGCGCCACCTAAATATTCGCGATAAGTCTTGTCCCGTGTGTGGCAAAACTTTTGTGGCCGGCTCATCGTACTACGCCCATTTGATGTTGCACGATGATACGAAACGTTTTGAATGCGACAAATGTGATATGAAATTCGCCCAATACGCTGGTCTgtacaaacataaaaagaaacatcataaataa
Protein Sequence: MKCGEVFTWMCAGELYAVECKLCEDCPLCPLSEFPQHMDIWHTEWQIATVNHEDNNGQEHFTDDDDDDDYNDDEAQQQNALNNNYDCDRGLEPAHALQDDRVTSQQQTKEVIEPFEQVLIEQEVGIQPTHTNENIYEEEYVEDVNLPAADNKQFVIENKQKLTVNTNPILQLLRNEQRTATNEVTESKTEITGIETENHMVANFKESKRKLNENASELIKTDLMPSYTGGMKQRYNKMELIESETEPNEMAIEGHEKGKQTKIYNKLQNKDNECGSCSAIKTILTTAKAETHENETLQNHMGAQLNEQKNFASGSSENNYAHLKFNETKRSAEKNLEKSAKFCLELQQDKMKMNAKETNEYETQNPTFLDCLQKSAEIKGKKESKRDTNENGTSEIEKHENFECLQNSLEVRQEANKISKMPSNENETYEKLPMIEMENMEHDKTSICYDVQDSRKPGKSWESFTKNFTYSPNFKHSNKKELQVQGTNENEATKYIKRRSVTNGRERKRKEIRQRDGGKLIKIETKNFAGLKNILHKSSNLKALNSNKRLSDSNRENEFKRKVSHYENEREDSSKRLKTCYSTRIKKRKKIHWKRCAFKRPLKVKFYYLKNHFENSKGTRRRSTEEEEYSSELNVSLANESEMKTLCYEGKNRDSLIFKEKVNGVVGQEERKPLPSLSPKEDNGKGRKQTLATQFFSSFSGNSEKVQLKFQEPQTGTATKVEGASETLYKLDYNISSQSFLERVPRNSNHQMSSSGKGIQLFKNSENSEEHDPNLQKRSAKNPGNSEKSEHNLTSDQLNLHESFSGKFTQHKGTSRNSEYYENHQHIDTFDGKGNGPTVTSLGAEIPKSSEYSQKHVVPSDQFNLWGCCSRPDSLRNLNTQQEAVSRTSENSYKLEHSATYDQLNLQESSSGKDRQHEEAAKSSDKSEKREHNPNSDQFNFRESSSDKSSYTTLNLPQEGASQQTCTSYQQHDLQQFFSVNITQHKGPSSNCQKLESFCSKANCATPGIKPSSPLSPKTEEEHFEFYEPKEKLNEKHIRHLIKLYREHPRLWDQTHSEFCEPPECRKSWHTITQQWNEFCQRKFTIAEVRIRICTLCQRFLQQRDRLASEGEVDESVKFPYYEEMQFLEQHKSLQRRRELYDQQNDKILEIYQHFPALWHVGFYKLTKPAEREQAIESISKALRLFDINLSCMAIRKRLRSLRKCYRLEKIRHLHAQVEETAFESKFQHYERMHFLDKHIEPFACRVCGKIFENLPAYRQHLAAEGHGSVGMEDPAVVVNAELGFNEESCEALVPENSFENGFETEAFAISPTDNDMQHFSESEDSRDILQRFTPFSSSPVPSGSMIATPAHLQGSETPSSPIQEVVYFPLDTTSESIIDSLHFEEQLIEEIMENVPDSVILSQQGLDQFINGAGRCDEASLNFDLTVKNCSPSLVHAENSFIVEHPDIVADQSASILSLSPMAESFTPLQFYNENSFIIEHPDIVAEQNVCFLNEETNVETVGAALLHGDGSAAVQHSEAIPLAIDKALEVSSPYLSDQETCSFNDLEDQIAKLCSTENTSPTAPLMVKMQCPGFSIDVKLNSSTTETLDAGSLNEFDTNLMSTADTSTIPLPDHLIHKMIEVYRKYPQLWNPNHLDFNSRTLRREAWCSLTAEFNAAMGGKPISWRTLHRKLTDYAKYYKKLITEQEDYARVVNKWAFYEDFKFLDDVIDVNNELQRSIHHRDSNFKIIDIYRTLPQLWNTQNPDYNKRGNKQRNIEIMCNKLQEEKNLQLTTERVKSRLIELRTQYRTAKKQRLKCLKNKQTFSTNQFEYYEALNFLDDHIDPFICVTCNMEFQKRTAYKQHLKKEHTQKSASKTSLTILPPEADVENICHICGIKFTTRSNLRHHLRRHEGIRNYACTLCPMKFYASYALKVHIRSHTKECPYTCDKCGMSFVSAGKLNQHVKRHFNKKDFQCDFCAKAFFTAVEKDRHERRHLNIRDKSCPVCGKTFVAGSSYYAHLMLHDDTKRFECDKCDMKFAQYAGLYKHKKKHHK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -