Basic Information

Insect: Linnaemya vulpina
Gene Symbol: Mtf1
Assembly: GCA_963675445.1
Location: OY776278.1:12497925-12510972[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 3.4e-05 0.004 18.8 1.7 1 23 430 454 430 454 0.99

2 6 0.00041 0.049 15.3 0.4 1 23 460 484 460 484 0.98

3 6 0.00032 0.038 15.7 0.6 1 23 490 514 490 514 0.98

4 6 4e-06 0.00048 21.6 6.2 1 23 519 541 519 541 0.98

5 6 2.1e-06 0.00024 22.6 2.8 1 23 547 571 547 571 0.99

6 6 0.00045 0.054 15.2 5.8 1 23 577 601 577 601 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	3.4e-05	0.004	18.8	1.7	1	23	430	454	430	454	0.99
2	6	0.00041	0.049	15.3	0.4	1	23	460	484	460	484	0.98
3	6	0.00032	0.038	15.7	0.6	1	23	490	514	490	514	0.98
4	6	4e-06	0.00048	21.6	6.2	1	23	519	541	519	541	0.98
5	6	2.1e-06	0.00024	22.6	2.8	1	23	547	571	547	571	0.99
6	6	0.00045	0.054	15.2	5.8	1	23	577	601	577	601	0.96

Sequence Information

Coding Sequence: atggaaacaataagtgaaaatatattgtatcaagaaaatcaaattcaagaaatatttGCTAGTGAAACAAGTGATTATGATTCCTCCGCATATAATACAAGTACAAATATATCAACATCCTCCTTATCAAATAGTTCGTCAATATGTTCGCCACCGTCGTCATTAACGAAATCTCCTTCGATAGAAAGAATGAAAGCAATGACCGCTGCTGGTGCAACACAATTAGATCATGATGAAACAACACTACTCAACGATTATTTTCAAGCAACACAGCAAATGGAGCAACAAAATATGACGCTGCAAGCTACTGAACCTCAAGAACAGCAACAGCAGTTACAATTAAATCAACAGGTGCTGCAACAATTAGGTTTTAATATATACGACGATAATTTAGATATTAACTATTCCACCGTCAATACTACAGAAAATGCCATAAATAATACTTTTCCTATTTTATATGGCGATTCTTCGCCCTGCTTAATTGATTACAATAATAACGATGATAGTACTATCTCACATAAAATTTTGGGTTTATCAAACGACTCAAATTTCTATATAGATgatgatttcattttaaaatatctaaaccCTCCAACAGAACAAACCCCTCAAATGTCTTCAACAACTGCCAATTTATACACATCGTCATCTAACGATATAACCAATGAAAGTAATACCATACTACTGTCAACATTACCATCATCATCTTTGACACATTCACCCTCATCCCTACCAATTACATCGACTACAATATCGACTGCCTCGGCAGCACCCAACATAAATTTCACGGAATTACATGGGTCATCGTCTTCAAATAAGCCATGCTCTATAATTTCCATAAATAGTGATAGTAATATCAACTCATATAGCGATTTCTCGTCGGTAGAAAATGGTATTTGTTTAAAGTTTGAATATGCTTTTCAAAATCAGCAGTTAGTACAAGTTCAGCCTCCACCACCAACACAAACTGTTCTATCTAATTCAGCAAATAGTGTTGTGTCAATGTCAGACCCCATTTCTTTATTGACTTCATCGTATGAATCAACTGATGGTGGGGGAGATGTAGATCTCTCATCGCCATTAATAGCGGCATCTTACGTATTAAGCCAAACTCAGTCGTTGTCAGGATGCGATACGGTCAATATATCGAGTGAAAGTTATATGGAAGTAAATAATGAACCAGATGAACTTTCATTATGTATTCGACCTGGTGCCTTACACAAACAGAAAGGAGAGCCAACTTATGCAACAGTTTCTTTCGAGAGTTCAGATGAATCATTATCTCGCTACAAGTGCAATTATGAGAATTGTAATCGCAGTTACAGCACAATTGGTAATCTTAGAACACATTTGAAGACTCATAAGGGGGAATATCGTTTCAAGTGTTCAGAAGAAGGGTGCAGTAAAGCGTTTCTAACTTCCTATAGTTTGAAAATCCATATTCGAGTACATACAAAAGTTAAACCTTATGAATGTGATGTAGGAGGGTGTGAGAAAGCGTTCAATACACGCTATAGACTTCATGCCCATTTGCGTCTGCACAATGGCCAAACTTTCAATTGTGACcagtgtaagaaatgttttaCGACTTTAAGTGATTTGAAAAAGCACACTCGTACACATACCCAAGAAAGGCCCTACAAATGCCCCGAAGATACATGTGGTAAAGCATTTACAGCTTCGCATCATTTAAAGACTCACATACGAACGCATACCGGAGAACGTCCGTATCCGTGTGAAGAAACCAGTTGTCATAAATCGTTTAGTACCTCACACAGCTTAAAGTCGCATAAAAAAACCCATCAAAAACAAACTCAGAATCGTCCACCAAAAGAGCgtaaaacaaaaactgcaaATCGTAACGAAAATATTCTTTATAACTGCAGCTCAGGAGAACCGTATGTAAAGGCAATAAAACAGGAAGCAGATAAAATATTCACGTATCCGGAAGAAACTAGTTCAACGTATAATAAAAGTGAATTTGAAGAAATCGAATGCAAAAATGATataaagcaaaaagaaatttcaGCATTTATCAAATCGGAAGCAGTGGAGTGTAATATTAACGATATGTACTCTACAAAAGTGCCGCAAATAAAATCATCTCAATATACTGCATTAGCTCCGAAAATTGAAAGTATGCCCTTGCCAGAAACTTCACAAGCTTTTCAGGTGGCTTATGCAGCAGAAGAAGAGCTACCAGCTCCTTGGATAGATGCAGGTGTCCTAGTACCGAAACCTATTTTACCCTTGGCACCTGTAACACCAGCTTGTGTTGCTATACCAACTGAAGTGCCCAGTTATGTTAATTTACAGCCTAACTTTTCAAATGCTATGTCAGCTGTAAATCCACAGTATCACTTGACAGCACAAAGCACAAATGTTAATGCAAACCCAAATATTTCTATGGACATCGATCAGAACATGACAAGCAATAATAGGCAAGGTCAGAATTCCTACCAACAAATACTTTCCGGTGCCAATTTTATACAAGATGTAATGCCACTGCAAGAAGAGAATATAGAGGACTTGCTGAAGGGTACTGATTATATCAGTGATGCTGATATAGAAACAGAATCACTACTCAATGATATCCTAATGACCATAGACAACAACACTAGTCTTTTGCAAGAAACTCTACAGCAAGCGGACGAAGTACCAACGGATGGAACAGGTCTCATAGAAGTAGACTTGCGAAATAGTAAACCGACCTTGAAGCAAATTACGGCTGATGCAGGCATATGTAGCTGCACCAATTGCAAAtgtgataaaattaaaaactgtcaAGGTGACTGTTCCACTGAGAATCCTTGTGGTAAAAAATCGGCAAATGTTAAAGGAATTAAGGATGGTTGttacacaacaaaaaataaagcttGCAAACCCCTCAGTAAATGTGAAACGGAAATGAATCAAAACATAGAAGATGTAGCAATGTTGTTGCAAAATCTGGCTTCAATGGGCAGTGGTGCGAAAGGTGGTTGTTGCGGCGGCGCTGATAATAATTCAAACACAAAAGAAACGTCTGCAACAAGCATTAACTCTGCTTGCTACAGCATGCAAAGTAATCAGTCTAATGTTAAATCTTGCTGTTCTGTGCCAGAATCAAAACCCACCTCAAACACCTCTGGCTGTTGTTCTGCAGAGAAGCCATTACCAACGAAATCAAGTTCTGGTTGTTCGTTTTCAGATACAAAAAGAATGCCACCACCCACAGCTCCCACGAATACTAATGCTCTTAAGGGGTCAAGTTGTACCTGCAAGAGTCCGTCAGAAGGCGTAGCTAATGGCTGTTGTGttgttatttgtataaaaactttacagACATTGCGAAAAGTTTTGAATCGCAAGAATTTAAATCTTATGCTTTGTCCCCAAAACCAAACGAATCGGAATTATTGa
Protein Sequence: METISENILYQENQIQEIFASETSDYDSSAYNTSTNISTSSLSNSSSICSPPSSLTKSPSIERMKAMTAAGATQLDHDETTLLNDYFQATQQMEQQNMTLQATEPQEQQQQLQLNQQVLQQLGFNIYDDNLDINYSTVNTTENAINNTFPILYGDSSPCLIDYNNNDDSTISHKILGLSNDSNFYIDDDFILKYLNPPTEQTPQMSSTTANLYTSSSNDITNESNTILLSTLPSSSLTHSPSSLPITSTTISTASAAPNINFTELHGSSSSNKPCSIISINSDSNINSYSDFSSVENGICLKFEYAFQNQQLVQVQPPPPTQTVLSNSANSVVSMSDPISLLTSSYESTDGGGDVDLSSPLIAASYVLSQTQSLSGCDTVNISSESYMEVNNEPDELSLCIRPGALHKQKGEPTYATVSFESSDESLSRYKCNYENCNRSYSTIGNLRTHLKTHKGEYRFKCSEEGCSKAFLTSYSLKIHIRVHTKVKPYECDVGGCEKAFNTRYRLHAHLRLHNGQTFNCDQCKKCFTTLSDLKKHTRTHTQERPYKCPEDTCGKAFTASHHLKTHIRTHTGERPYPCEETSCHKSFSTSHSLKSHKKTHQKQTQNRPPKERKTKTANRNENILYNCSSGEPYVKAIKQEADKIFTYPEETSSTYNKSEFEEIECKNDIKQKEISAFIKSEAVECNINDMYSTKVPQIKSSQYTALAPKIESMPLPETSQAFQVAYAAEEELPAPWIDAGVLVPKPILPLAPVTPACVAIPTEVPSYVNLQPNFSNAMSAVNPQYHLTAQSTNVNANPNISMDIDQNMTSNNRQGQNSYQQILSGANFIQDVMPLQEENIEDLLKGTDYISDADIETESLLNDILMTIDNNTSLLQETLQQADEVPTDGTGLIEVDLRNSKPTLKQITADAGICSCTNCKCDKIKNCQGDCSTENPCGKKSANVKGIKDGCYTTKNKACKPLSKCETEMNQNIEDVAMLLQNLASMGSGAKGGCCGGADNNSNTKETSATSINSACYSMQSNQSNVKSCCSVPESKPTSNTSGCCSAEKPLPTKSSSGCSFSDTKRMPPPTAPTNTNALKGSSCTCKSPSEGVANGCCVVICIKTLQTLRKVLNRKNLNLMLCPQNQTNRNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00900047;
90% Identity: -
80% Identity: -