Basic Information

Insect: Linnaemya vulpina
Gene Symbol: znf711
Assembly: GCA_963675445.1
Location: OY776280.1:35129742-35131538[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.33 39 6.2 2.3 2 23 256 278 255 278 0.95

2 10 0.33 39 6.2 0.1 6 23 287 304 287 304 0.99

3 10 0.00021 0.025 16.2 1.4 1 23 310 332 310 332 0.98

4 10 0.0023 0.27 13.0 1.3 1 23 342 364 342 364 0.98

5 10 0.041 4.9 9.0 3.5 1 19 372 390 372 395 0.91

6 10 0.0014 0.16 13.7 0.1 3 23 403 423 402 423 0.96

7 10 0.0013 0.15 13.8 0.4 2 23 432 454 431 454 0.96

8 10 1.2 1.4e+02 4.5 1.7 3 23 464 485 462 485 0.68

9 10 1.3e-05 0.0015 20.1 1.8 1 23 491 513 491 513 0.96

10 10 3e-05 0.0035 18.9 4.0 1 23 519 542 519 542 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.33	39	6.2	2.3	2	23	256	278	255	278	0.95
2	10	0.33	39	6.2	0.1	6	23	287	304	287	304	0.99
3	10	0.00021	0.025	16.2	1.4	1	23	310	332	310	332	0.98
4	10	0.0023	0.27	13.0	1.3	1	23	342	364	342	364	0.98
5	10	0.041	4.9	9.0	3.5	1	19	372	390	372	395	0.91
6	10	0.0014	0.16	13.7	0.1	3	23	403	423	402	423	0.96
7	10	0.0013	0.15	13.8	0.4	2	23	432	454	431	454	0.96
8	10	1.2	1.4e+02	4.5	1.7	3	23	464	485	462	485	0.68
9	10	1.3e-05	0.0015	20.1	1.8	1	23	491	513	491	513	0.96
10	10	3e-05	0.0035	18.9	4.0	1	23	519	542	519	542	0.96

Sequence Information

Coding Sequence: ATGGATACGTGTATAGTTTGTtgtcaaacaaatgaaaatatattttcacgcATCACTATCATATCCAGTGAGTGGAATGAGTTAAATATCCAGCGTATCATTGAGAAACATTTGTGGTGGTGGTATCTAAGGCCATCAGGAAATGGAGAAGTTCAGTGGATTTGCCGTCAGTGTTGGTTAGAATTATCATCCTTTCACAGCTTTTATCTAAAAGTTGAAAAGGAGCACGATTTCAATAATACGCTGCTATCACCGATGAAAAGTGATAAAGATGAGGTAGTTGCTGTTGATATTAAATTAGAAGAACATAATTTTTACAATGCATCAAAAGAGACAGAAAATTTGGTGAAACCTAAAAGAGGacgaaagaagaaaaatattcatatagagGAATCACCTACACATGTTAAGGatgaaaatgaaacaaatgATTCACTTAAGTTCCTAAAGATAGAAGTAGATGCTAATATATCGGTGAACGATGATGTTGGTGACATTGATTGGGAACAGTGCTTTATAAATGAAAGCGAAGAAAATACAGATGAGGAAAATGAAGATAAAGAAATAGCTAAAGATGAACTTAACATAGTGCCACATAAAAGAACTAGAAGAAAAGTTGGTACCAAATccaaaacggtcaccaaatacagaaaaaagtattcaaaaactaaaaaggaaAAGAGAATAAAGAGTGATTTAAAATCAAACGCATTGCAATCTATGAGGAAGAATGATGCATTTATTGCTGACAATCAGTTTCAACTATCCTGCTGCCTTTGCAGTATATCActggaaaattttaacaatttaaaaattcattttcggaAGGAACACGATACCTTAGGCTATGCTATGTGTTGTAATAAAAAGTTCTACAAACGAGGGGTCCTGGTGGATCATTTAAATGTTCACAAGGATCCTAATTATTTTATGTGCCTTCAATGCAACAAACCACTTTCTACTCGTCGCAGCTATGAAAAGCATATGGAAACGCATCAGTTGTACGAAACGCAACAAAGCTTATTTACATGCCAGCAATGTGATAAATCATTTATGAAGAAACCTGTATATGATCGACACGTTCTGACACATGTACCTGAAGAAGAGAGAAATTTTCAGTGTAGTATGTGTGATAAGAAATTTGCGTCTGAATATCTTCGAAAGCAACATTGCTCCCTAACACACTCAAAAAAATAcgctaaaatatgtgatataTGCGGCAAATTATTGAGGGATAGCTTTTCCTTTATCCGGCATATGGCAGAGCATAAAGGAGAAACACCTGCCAAAGTAGAATGTGATATATGTGGTGCACAACTGACAAATAAATATCGATTAAACCGCCACAAAAAAATGATGCATACAGAAGAAAACCAACAAGAACAAATATGTCCATACTGTTCCAAAGTGTCACCGAATCTAAATGCCCATCGACACCATGTCAAATACACCCATACTTTAGAACGTAAACATGCATGTAATATGTGCGATAAAAAGTTCAGAAGACCTTTGGAACTAAAAGAACATTTAAGTACCCATACAGGGGAACCGCTCTACACGTGCCCTCATTGTCCTCGAACTTTTATATCCAGTGCAAATATGCATAAACATCGTAAACTTACTCATCGCAAAGAATGGGAGGAGGGAAGAATGAAAAAGGAAGCGAAAGCATTAGCAGGCAAAAAGTTTCTAAAAACCTTATCAAATACAACTCAAAATGAAACTTcatataaagaatttacaatACTGGATCCTGGAAATGAATCTGCACCAATTTTAGCGGAGctagatttttga
Protein Sequence: MDTCIVCCQTNENIFSRITIISSEWNELNIQRIIEKHLWWWYLRPSGNGEVQWICRQCWLELSSFHSFYLKVEKEHDFNNTLLSPMKSDKDEVVAVDIKLEEHNFYNASKETENLVKPKRGRKKKNIHIEESPTHVKDENETNDSLKFLKIEVDANISVNDDVGDIDWEQCFINESEENTDEENEDKEIAKDELNIVPHKRTRRKVGTKSKTVTKYRKKYSKTKKEKRIKSDLKSNALQSMRKNDAFIADNQFQLSCCLCSISLENFNNLKIHFRKEHDTLGYAMCCNKKFYKRGVLVDHLNVHKDPNYFMCLQCNKPLSTRRSYEKHMETHQLYETQQSLFTCQQCDKSFMKKPVYDRHVLTHVPEEERNFQCSMCDKKFASEYLRKQHCSLTHSKKYAKICDICGKLLRDSFSFIRHMAEHKGETPAKVECDICGAQLTNKYRLNRHKKMMHTEENQQEQICPYCSKVSPNLNAHRHHVKYTHTLERKHACNMCDKKFRRPLELKEHLSTHTGEPLYTCPHCPRTFISSANMHKHRKLTHRKEWEEGRMKKEAKALAGKKFLKTLSNTTQNETSYKEFTILDPGNESAPILAELDF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00760461;
90% Identity: -
80% Identity: -