Basic Information

Insect: Linnaemya vulpina
Gene Symbol: wdn
Assembly: GCA_963675445.1
Location: OY776277.1:4836181-4840064[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.5 59 5.6 0.8 1 20 301 321 301 323 0.93

2 8 6e-06 0.00071 21.1 0.8 1 23 327 349 327 349 0.99

3 8 0.099 12 7.8 1.8 2 23 361 381 360 381 0.93

4 8 4.6e-06 0.00055 21.5 1.0 3 23 389 409 387 409 0.98

5 8 3.6e-05 0.0043 18.7 5.1 1 23 415 437 415 437 0.98

6 8 0.00035 0.042 15.5 3.0 1 23 443 465 443 465 0.97

7 8 8.7e-06 0.001 20.6 0.8 1 23 471 493 471 493 0.96

8 8 0.00016 0.019 16.6 2.3 1 23 499 522 499 522 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.5	59	5.6	0.8	1	20	301	321	301	323	0.93
2	8	6e-06	0.00071	21.1	0.8	1	23	327	349	327	349	0.99
3	8	0.099	12	7.8	1.8	2	23	361	381	360	381	0.93
4	8	4.6e-06	0.00055	21.5	1.0	3	23	389	409	387	409	0.98
5	8	3.6e-05	0.0043	18.7	5.1	1	23	415	437	415	437	0.98
6	8	0.00035	0.042	15.5	3.0	1	23	443	465	443	465	0.97
7	8	8.7e-06	0.001	20.6	0.8	1	23	471	493	471	493	0.96
8	8	0.00016	0.019	16.6	2.3	1	23	499	522	499	522	0.98

Sequence Information

Coding Sequence: atgaaagaaGAAGCAGAGACAAGTAGTAAATTGCCGCCTAAAATAATAATGGGTGGTGTTGGCGGCTCGTCGACTATGGCAGCAGCAATGTTGAAAACCACTAGTTCATCCACTATTCTTAATTCATCATCCAACTTCAGCATGAATACCAGCACACCGAGCAAACTACAGAGTGATGAAATTCTAAGCGCGCTGTTGCGGATGAATAACTTTGATTCCATATCAAGCATAAAAGATGAATCTCTAGATATTGATCTATCCGCATGTGTAACTATAAGTGCAGATCCGTCGGGAATCATTGGAGGAAACAGCTTATCATCATCAGACTTTTGGAGAGCTTTGGATGAGAGTGCACAGGCTTCACAGTTGGACGTAAGTAATAACAGTCTTAACACAACAATTATGGGTGGTGGAAGCAGTAGTGCAAGTCGTGAATCATTACAGATATCACCTTCCGCATCAAATAACGTCAACTCTATTCTCGCGAttgataaaaatgaaaacaagatCACTGTCAAGAAGGAACAAACAGATTTTAGTGGTACTTTTCTTAAGCCTTCCACAGGAATTTCATTTTCGCCATTAAAACGTAGTATCAAACCTCTCCAGGCTGAGCAACAAGcacgaaaagaaaaatgtgcaaCCAACTTGCCAAAATCGGAAATAGGACCCCCTTCTCTATCACCAATTATAAGAGCCCACCAGACATTTATAAGATCACAAGTGGAACATCAAAAGCTAAACAATGGTAGCCTTGGAACTCAACTAACATTACAGAACCGCAAACGCCAAAAAGACCCAACGTCGGCTGCGAACCAACCTCCTCCACTGGCTGCATTAGAAACACCTACAAAATTCAAGGAACCTGTAACTAAATCTTTGCCGTTGCCAGAACCCGTGTATAAATGTCTGGATTGCACAAATCAAATTTTCCGTGACAGTCAGGAACTGTCCAAACATGCGAATCATCGCCTAATGTACAAGTGCTCGGAGTGCGATAAAGAATTTGATCTCGAGGCATCACtgaaaaaacatttgaaaacacATCGTCCTATTGATGCACGTAAAGATGCTTGGAAAAAATGTCCGGATTGTGGAAAGTGCCTTAAACTAGGAAGTATGTGGATGCATCGTAAAATACatacggaaaataaaaaatatgggtGCGAGATATGTGGACAGAAATTTGTACAGAAGATTAACTTGACCCATCATCAACGCATTCATACCTCAGAAAAGCCATACGAATGCTCAGAATGCCAAAAACGTTTTCAAGAGCGCAGCCATCTTCAACGTCATCAAAAATATCATGCACAGACGCGATCATATCGTTGCGAGAAATGTGGGAAAATGTACAAGACTGAACGTTGTCTTAAAGTACATAATTTAGTACATCTGGAGCAAAGGCCTTTTGCATGCACCGTTTGCGACAAGTCTTTTATCTCCAATTCTAAACTAAAGCAGCATTCAAACATACACACAGGAGAAAGGCCATTCAAATGTAATTATTGCCCCAgggattttacaaattttccgAATTGGTTGAAGCATACAAGACGCCGCCACAAAGTTGACCATAAAACTGGTGAAATGTTGGAAAATATTCCTTCATATTGCTCTAAGAAGTCGACACGCACgccaaaagaaaagaaacccaCCGAATTAAAAGCAGCTGCTGCAGCCACACCACCTTCAACAAAGAACAATAACAAGAATTCGGTAATAAATCAAAAGCCCTCTGATCTCACTAAAATAATGAATGCAAATGAattacaacagcagcaacaaatattAGTTACGTATTCATCTGCAATCACCACAACTACATCTTCGCAAAATACCGCGCCCACTGCTGTGTTTAGTACAATTACTCTTACAAAACCAATCTTATCGGTAACTACGGTTAATAGAAATCAGATGAGTACCATAAACGGACCACCTCCTTTAGCTAAAGTTCCAACCAAACGCAAGAAAAAGCAAAACCCTGTTGTTACTCAAATCTCTAAGGCTGATTCTAATACCATCTCAGTGGTAACTCCAGCAACAACTTCGACAACAAATTTTCTGGTTGCTTCTTCGCCAGCCCACAAAAATGTACCAAATGTCAAAACATTTTCTGGTAACGGTCCACCACCTCTGGCTATGGTATATAGTACTAAACCTATTAACGTAATTTGTACAACACTTTCAGCAACTAATACCGccaatacattgaagacatcTCATCTCCAGAAACAGCTTCCACAACAACAAACTCATACTAAAGTGGAGAAAGCTAAAAGAGAACGAAAACAACCCATGCCAAAGCAAGTTCAACAAGTCCCTCCaccattaattataaaaaaagaatttatagaaCCAAAGTCGGAAATAGTTGCTCAATTACATGATCATCAGCAGGATCAACAGCGTTTACAGTCACAACAGCTGCAACAGCAGCATCAAAATCAAACCAAAGTAACTTTTACCGATTTACATTGTTTAAGCATCACTTCAGCTGAAGAGTTAATAATGGAACAGGCATTAGAGATGGAAGAATGTGGTCTATTCAAAGCAACCCTACCGACAAATATTGATCATCATGTCATGACAAATTTTGCTGACACCGACAATGCTATATCTTCAGATTCTATGGCTGATTtacactttaaaataaaagaggaacACCATGACatggatttgaaaataaaatctgaagAATTTgattctATCAAAAAGAAATCCATATGCTCTTCTCTGGAGTCCTCACCATTTTCTTCCCCTGCCTCTATGGAACTCGCACCCGCATCTACTTTAACATCCAAcgatttttcaacaaacaatttttacttaCCCCCGTTTACTATTGCGAATAACCAAGCAAACGCGTCAATTACAACAATGACATTTGAAGACTCACGTAGTGGTATGCCAACGTCCCATGCATTTTTGCCTCAAATCGTTACTACCAATGTTAGTGTTCCTGATTtgatacaaattaataataacagtCAGAGATATTTAAAAGCCTCCGCTGCAGCTACTAGCAGTAGTAATACAAATCCATCTTTTATTAACCAACTATACTTGCCGATTACGGTCAATGCTGGTCCTGTGCTAATGAAATCTAACCAAGTTTTACCCTCCGTAGATACGTTGTTGTTTTCAAATTCCAAATTGGGGCATTTTAACAGCCGTAATTTACCAAAACAAGCCACAACAGCTCAACCCAATTTATCCTAA
Protein Sequence: MKEEAETSSKLPPKIIMGGVGGSSTMAAAMLKTTSSSTILNSSSNFSMNTSTPSKLQSDEILSALLRMNNFDSISSIKDESLDIDLSACVTISADPSGIIGGNSLSSSDFWRALDESAQASQLDVSNNSLNTTIMGGGSSSASRESLQISPSASNNVNSILAIDKNENKITVKKEQTDFSGTFLKPSTGISFSPLKRSIKPLQAEQQARKEKCATNLPKSEIGPPSLSPIIRAHQTFIRSQVEHQKLNNGSLGTQLTLQNRKRQKDPTSAANQPPPLAALETPTKFKEPVTKSLPLPEPVYKCLDCTNQIFRDSQELSKHANHRLMYKCSECDKEFDLEASLKKHLKTHRPIDARKDAWKKCPDCGKCLKLGSMWMHRKIHTENKKYGCEICGQKFVQKINLTHHQRIHTSEKPYECSECQKRFQERSHLQRHQKYHAQTRSYRCEKCGKMYKTERCLKVHNLVHLEQRPFACTVCDKSFISNSKLKQHSNIHTGERPFKCNYCPRDFTNFPNWLKHTRRRHKVDHKTGEMLENIPSYCSKKSTRTPKEKKPTELKAAAAATPPSTKNNNKNSVINQKPSDLTKIMNANELQQQQQILVTYSSAITTTTSSQNTAPTAVFSTITLTKPILSVTTVNRNQMSTINGPPPLAKVPTKRKKKQNPVVTQISKADSNTISVVTPATTSTTNFLVASSPAHKNVPNVKTFSGNGPPPLAMVYSTKPINVICTTLSATNTANTLKTSHLQKQLPQQQTHTKVEKAKRERKQPMPKQVQQVPPPLIIKKEFIEPKSEIVAQLHDHQQDQQRLQSQQLQQQHQNQTKVTFTDLHCLSITSAEELIMEQALEMEECGLFKATLPTNIDHHVMTNFADTDNAISSDSMADLHFKIKEEHHDMDLKIKSEEFDSIKKKSICSSLESSPFSSPASMELAPASTLTSNDFSTNNFYLPPFTIANNQANASITTMTFEDSRSGMPTSHAFLPQIVTTNVSVPDLIQINNNSQRYLKASAAATSSSNTNPSFINQLYLPITVNAGPVLMKSNQVLPSVDTLLFSNSKLGHFNSRNLPKQATTAQPNLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00760444;
90% Identity: -
80% Identity: -