Basic Information

Insect: Linnaemya vulpina
Gene Symbol: zfh1
Assembly: GCA_963675445.1
Location: OY776277.1:41935401-41940739[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00015 0.018 16.7 0.7 1 23 196 218 196 218 0.95

2 15 0.83 98 4.9 1.1 3 23 226 246 224 246 0.94

3 15 0.00027 0.032 15.9 0.5 1 23 413 435 413 435 0.98

4 15 0.00042 0.05 15.3 0.4 1 23 441 463 441 463 0.98

5 15 0.0072 0.86 11.4 6.1 1 21 495 515 495 517 0.94

6 15 0.013 1.5 10.6 0.3 1 23 538 560 538 560 0.94

7 15 0.013 1.6 10.6 0.8 1 23 566 589 566 589 0.97

8 15 0.41 49 5.9 0.4 5 19 600 614 597 615 0.91

9 15 0.00025 0.029 16.0 5.6 1 23 624 646 624 646 0.97

10 15 0.055 6.5 8.6 1.7 2 23 652 673 651 673 0.97

11 15 7.7e-05 0.0092 17.6 0.2 1 23 682 704 682 704 0.98

12 15 0.0073 0.86 11.4 0.2 3 23 712 732 710 732 0.97

13 15 8.7e-05 0.01 17.4 0.5 1 23 738 760 738 761 0.95

14 15 0.0018 0.21 13.3 0.0 1 23 771 793 771 793 0.97

15 15 0.021 2.5 10.0 0.0 1 20 1368 1387 1368 1390 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00015	0.018	16.7	0.7	1	23	196	218	196	218	0.95
2	15	0.83	98	4.9	1.1	3	23	226	246	224	246	0.94
3	15	0.00027	0.032	15.9	0.5	1	23	413	435	413	435	0.98
4	15	0.00042	0.05	15.3	0.4	1	23	441	463	441	463	0.98
5	15	0.0072	0.86	11.4	6.1	1	21	495	515	495	517	0.94
6	15	0.013	1.5	10.6	0.3	1	23	538	560	538	560	0.94
7	15	0.013	1.6	10.6	0.8	1	23	566	589	566	589	0.97
8	15	0.41	49	5.9	0.4	5	19	600	614	597	615	0.91
9	15	0.00025	0.029	16.0	5.6	1	23	624	646	624	646	0.97
10	15	0.055	6.5	8.6	1.7	2	23	652	673	651	673	0.97
11	15	7.7e-05	0.0092	17.6	0.2	1	23	682	704	682	704	0.98
12	15	0.0073	0.86	11.4	0.2	3	23	712	732	710	732	0.97
13	15	8.7e-05	0.01	17.4	0.5	1	23	738	760	738	761	0.95
14	15	0.0018	0.21	13.3	0.0	1	23	771	793	771	793	0.97
15	15	0.021	2.5	10.0	0.0	1	20	1368	1387	1368	1390	0.93

Sequence Information

Coding Sequence: atggatAACCAATCCTATGGTGGCATCCAGTGGATAGAACATCGCTCAGGTAATATTTCCTCTCATGTAGGAGATATGAAAACTGCCGGTCAGTTGGTAATTGATCCACACCCACCTCGTGAAGAGGATCTAATGGCTACCGCTAATTCATCGGCATATATGATTACTGAAGATGACAATGATTCTACAAACACAGCACAAATTGCTGCAGAAAATCTTATCTTCATGGCCCGCGATGGCCAAATGATGGCAGAAATAATGAGTAATGCTACTCACGAAGCAAATGGAGCAGTGGTTGTGACTGCAAGTGATGGCGAACAAATGGATTGCGAAGCAATTATGGAGCAGGCTGCGTTAATACAACATGAAGATGCAGGTGGAGGAGTTTATAGTGTGGATCATTTTACCGAAAATACACCGCAAATGGTTACAGAAGAGGTAATCACTGATGATTGGGTGCAACATCAAGGTGAAGAAAGAGTTGAAATACCCGCGGATCAAATTATTGGATCGAGCTCTCAGGTGTTACTAGACATTGAAGTTCCCTTGCCAACCGTTCAAGATGAATACACTGCCTTACGACCATATCCGTGCGACTTTTGTAGCCGCCGATTTCGTAAAAAGGCTAGTCTAATGAACCATATGGTAGCCCATCAAACAGATAGACCACATTTGTGCAAATTATGTGGTGGAAGATATTTAAGGAGACAGGATCTTATTAATCATCTCAAAGGGCATGCTGAGGAACCACCCGAACAAGCAAACATGGACGATAATGAGTTCATACATTTCGTTGCCGATACTACGTCTTCCACACAACGCACTACCAATGATCATTATTATGAACAGGATTGGAGTGTACCCGAAGATTCAGTGACCATACCAACAAAATCTAGTCGAAAACAACAACATACTACCTCTAATCAACAAGTCAGAGTTGATACTATTATATCTTGTCCAGATGTACAAACTAACGAATCCAATGTCTCAGTACCCACAAGGGGCCGTATAAGTCGTTTGAAGCCTAAAGAAGACACATCCTACGTCGTGGAAATACCAAATAATTGCACGTCAGGAGAAATGATGATATCGTCAGCTTACAGCATTATAGAATGTGATACTTTTTCAGCCAATTCGGCAGCTGTTAAACTGTCTCAAGATAATACACCTGCTTTGCCAGAGAACGAAGAAGTGCAAAATATCTCACAGTTTCCTGTCATCGACGATAGTAAACCATTTGTTTGCCAACAGTGTGGCTTAGCCTTTTCAAGAGAAAAAGCTATGCTATCACATACAAAGacaCATCGTAATGACTCCCCGTTTGAGTGCCCTCAATGTAACGAGATGTTTTGGGATCAAAATAGTTTGCAAGATCATCAGAAATCCCATCAGTTTGAAGAGAGTAATTCCGAATATGACCCAAATGAAGCCGACGATGAAACACAATCTGAATCAGAGTCAGAACAACAGCTATATGGAGAATATTATTGCAGTGAATGTGGGATGTCGTTTCATCGACATGATCTCTTAAGACGACATGCAAAGTGTCATGCAAAGGAAGTTTTTGCTTCCGATCAATCTAATAAAAATGGTATGGAAAATCGAGATCAGCATTGTTGTAACACATGTGGTGAGACCTTTGCTGAAgctttagatttattggcccaTGCCGAAATACATGCTCGCTACCCGCCTTTTAAATGTGTACTATGCGGTGAATCTTTTTTCGAagaaaatactattaaaaagcATCTGCAGTCTCAGCATTCTAACGATCTTACAGAAAACTCTTGCATATTATGTGGTAAGGAGTGTCGCGACCGTAAAGCGTTAATGAAGCATGCTTGGGATCACTCGAGGGAAAAATGTCACTCCTGTTCAAAGTGCggcaaaaatttccacaataaaGCTCGTCTTAAACGACACATGGCCTCGCACCGTGACAAATCTGTTCAGTGCGATGTTTGCCATGAGGAGTTTCCCGATGGTCGAACTCTTTCAAATCACCGTCATTCACATAGTGCCACTTCAGCAGGCAAACTTTTTCCATGTCTGGAATGTGGCAAGACATTTGGCTCCCGAAGCTCCCAACAAATTCATGTGCGCATCCATACTGGTGAAAGGCCATATGGTTGCCGTTTTTGTTGGAAAGCCTTCGCCGATGGTGGTACTTTGCGAAAACACGAACGTATACACACTGGGGAAAAACCTTATGCATGTTCCGTTTGTCCTCGTGCCTTCAATCAACGTGTTGTGCTCAGAGAACATATACGGTCGCACCATTCGGGGCTGGATGTAAAGAGAGGTATTTATTATTGTACGGTTTGTGGTGCTGAATTATCAACTTCAGGAGATTTGATACAACATTTAATACAACACAGTGATATGAATACAGCCTTGCAAAGACAACCAGTGACTGGTCCTCGTAAATATAAACGTCGGCGGAAACTGAAACCTCACGAACTTGCACGTCTTAAACGTCAAGTAAAACATAATGGTGGCGCTGGTAGCGAAATTGATTTATCCGACTTTGACATAGACAACGTTGACGAACTACTAATCATGGCATCGGATAACCATTCTATATCTGACACTAAAGCAGGAATTCACGGAACACAAAGCATGCCACAAGCCAAATCAACAAAAAGAAAGCAAGTCTCTTCTGCCACACATGCCgaaagaaataatgaaaacaatgcCGCAAAAACTAAGACAAAAGCACACATTTTGAACGAACAAGACGATTTTGATCTAGATGTTGTCACAGAGGATGATGCACTTAAAAAGCAACGTTATAATTCGAACAGTAGTGATAAAATTTGGGCAACAAAACAATCTGAAGACACATATAAAGGCTTACTTTCGAATTTAGAAACAACTCTTCAAAGTATTGACACTTTAGTAGTTGGTCCATCAAAAAAGTCCAcgaattttgtagaaaatagatttttagaGTCATCTCATCGCCAAACAAGGCGTAAAATGAAACAAGAAGCAACCACCACGGCTCAGCGAACGGAACAGGTGCAATTAAAAAGAATAGATAAAGAAGCCACTTCCACAGCAAGTGGTAGAGGTCGTAAGGGTAAAAGCGGTAGTGCCAAACAGTCCAAAGGAGCACAAATGGTGCATACGGAAAAATATACTGTTACAACAAATGACACGGCAAGTTCTTCAGCAGTATCGAccgaaataaagaaaaaatcaattataacTCGATCTTCAAATGTAGAAAAAACTTCTGGTATAGTCGATGATTACGACATAATTTCTCCCGCATTACAGCCACCCAAGCAAATTAGCTCTAGCCCAttacatataaaacaagaacAAGACAATCATAACTATCAAATGCAAGATCACTCGAAAGAGCACCATCTAATGAAAAATCCGCCTAATTCAAACCACAACACTTCTGCTCGAACACAATCAACCACCCGCAATACAAATCCAAATGAACTCTATGACGCCCATTTATTACTAGAGACCTCTTGTTTGCGTAACGATCTAGATGAATTTCTTCGTTCTCCATCAAAGTCCGATAAATCAAGACAACGCTTTACTAGTGAATCTTCCACTCAATTTTTGCCTGATCAATCACAAGAGGAACAACACTTGATAAAAATAGAACCAACATCCCCTGATTTAAGAGAAATTGTGAATGGAGCAATCAATACTGCCTCAGCTCAAGCGGATCTGGAATTAGAAGTAAAGGCTTTACAAAATcgtaaaagtaaaaaatcttCCCGTAATCAACGGGTGTTAAGTTCGAATCGCAAATATTTCGAGTTCTCGAATGATATAAACAGTAGTGAAATCacgaatcataataaaaattcttcagCGAAATCATTAACATCGAAGTCGTCCAAATCTGGTAAAACGGAATcatcaaaaattgtaaaaccTGTTCAAAATACTTCAGCCTCAGCTTCATATTTAGATTACACGATGGTAGATACTTTCAATACGGTTGCAGGTTCCTCAGCAAATAATAACTCCTTCGCTTCTATATCCGCAGTAGTTTCTGCAGCCGATGCTTCTGCTGCGGCACAACAAAATTCTTCAGCTGCAGTCTGTACTCGTAAGCCTCAACGTTATTTTGAATGCGAAATGTGCAGCGCCATTTTTTCAGATCGTGCTCAATTGTTGGATCATGTgcccatacatatataa
Protein Sequence: MDNQSYGGIQWIEHRSGNISSHVGDMKTAGQLVIDPHPPREEDLMATANSSAYMITEDDNDSTNTAQIAAENLIFMARDGQMMAEIMSNATHEANGAVVVTASDGEQMDCEAIMEQAALIQHEDAGGGVYSVDHFTENTPQMVTEEVITDDWVQHQGEERVEIPADQIIGSSSQVLLDIEVPLPTVQDEYTALRPYPCDFCSRRFRKKASLMNHMVAHQTDRPHLCKLCGGRYLRRQDLINHLKGHAEEPPEQANMDDNEFIHFVADTTSSTQRTTNDHYYEQDWSVPEDSVTIPTKSSRKQQHTTSNQQVRVDTIISCPDVQTNESNVSVPTRGRISRLKPKEDTSYVVEIPNNCTSGEMMISSAYSIIECDTFSANSAAVKLSQDNTPALPENEEVQNISQFPVIDDSKPFVCQQCGLAFSREKAMLSHTKTHRNDSPFECPQCNEMFWDQNSLQDHQKSHQFEESNSEYDPNEADDETQSESESEQQLYGEYYCSECGMSFHRHDLLRRHAKCHAKEVFASDQSNKNGMENRDQHCCNTCGETFAEALDLLAHAEIHARYPPFKCVLCGESFFEENTIKKHLQSQHSNDLTENSCILCGKECRDRKALMKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVQCDVCHEEFPDGRTLSNHRHSHSATSAGKLFPCLECGKTFGSRSSQQIHVRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDVKRGIYYCTVCGAELSTSGDLIQHLIQHSDMNTALQRQPVTGPRKYKRRRKLKPHELARLKRQVKHNGGAGSEIDLSDFDIDNVDELLIMASDNHSISDTKAGIHGTQSMPQAKSTKRKQVSSATHAERNNENNAAKTKTKAHILNEQDDFDLDVVTEDDALKKQRYNSNSSDKIWATKQSEDTYKGLLSNLETTLQSIDTLVVGPSKKSTNFVENRFLESSHRQTRRKMKQEATTTAQRTEQVQLKRIDKEATSTASGRGRKGKSGSAKQSKGAQMVHTEKYTVTTNDTASSSAVSTEIKKKSIITRSSNVEKTSGIVDDYDIISPALQPPKQISSSPLHIKQEQDNHNYQMQDHSKEHHLMKNPPNSNHNTSARTQSTTRNTNPNELYDAHLLLETSCLRNDLDEFLRSPSKSDKSRQRFTSESSTQFLPDQSQEEQHLIKIEPTSPDLREIVNGAINTASAQADLELEVKALQNRKSKKSSRNQRVLSSNRKYFEFSNDINSSEITNHNKNSSAKSLTSKSSKSGKTESSKIVKPVQNTSASASYLDYTMVDTFNTVAGSSANNNSFASISAVVSAADASAAAQQNSSAAVCTRKPQRYFECEMCSAIFSDRAQLLDHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00899913;
90% Identity: -
80% Identity: -