Basic Information

Insect: Linnaemya vulpina
Gene Symbol: JARID2
Assembly: GCA_963675445.1
Location: OY776278.1:18043352-18052983[-]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3e-22 2.2e-18 67.7 0.0 6 89 1911 1992 1906 1992 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3e-22	2.2e-18	67.7	0.0	6	89	1911	1992	1906	1992	0.92

Sequence Information

Coding Sequence: ATGGTGGTCTCAAAAGACTCCAAGCGTAAACGCAAGGAGTCGTCTCCGCCAGCGACACCGCAGCAACAATCATCTACGGCTGTAGAGTCATCGCCAGAAATGCCCAAGAGGACAAAGGTTCAAGCTCAGCGGAAGTTTGCGCAAGGACAGAGTGCTCCCCAATCGTCTTATAGTTCTATAATTGCTGCATCGTCCTCATCTAATACTGGACCAAGTACTTCATCAGAAAGCCGTGAACCACCAACTGAGATTTTACCTAATAAACGTCCCAAAACTGAAGACTTTCTAACATTTCTGTGTTTTCGTGGATCTTCTGCCTTACCACCACATTTAGATTTTCTAAATCAGGGCAAAAGTAAAGAACCCGAAAGGCCTGTTAAGAAGCCAACTATAAAACCCGTGATTAAAAAGAAAGGAAGAAAAGGGCGACCACCTAAGAATGCGAAACAGAAGGAAGAAAAAGTGTCTACAAAAACCGAGGTCGATAAAATCGTTCTTGTGCCGGAAGAAAATTTAGCAAATAGAaatgaaactgaaaaaaaattagatatacCAGACAAAGTACAAGTGGGAGAGGATGAGGAGGATGACGAAGACGTGCCTAGTTTTCCTGTGCGTAAAAGGGCAGAAGTAGTAGCTGAGGGTAACCGTCGAAGCAATCGTGGCAACGCAGACGATAAATGCAATAATTCTGTAGAAACATCAAAAAGGCGATCAAATCGCGCAAGTACTAAAGAATCCAGAGTTATGCATGATCATCTATCAGACGATGAAGACGACGAATACGTTTCAACAGTTGATGAGAATAGTAAAGCTATTTGCTCAGATATAGACACAAAGGAtcgaaaaactataaaaacgcCTATTAATTGTGGCAGGAAGTCTGAAACACCTTCAAAAGAAAGCGAAACAACAGGTAGGTCTCGAAAAGGAAGGCCCGCTtcaaataacaagaaaaaagatGCCGAAAACAGTAAGGAAAATGAAAAGGAAGAGTCGGTTAAATCAGACATTAAAGATAAAGCTCCAGTAAAGCGTCCAAGGCAAAAAGAGTCACCAATTTTTATACCATCTCCAGAACCATCAGGGCGAATGACTAGACAAAGAGCATTTTTTGAACCCGTTAAGGTCATCCATAAAGAAAATGAAGATACAGatggtgaaataaaaaaagttactaCTGAGGAAACTGTTACGGAATTTAAAACCAAGAATTCAGATTCTGTTGGTGAAGTTCATGAACCGACAATGGTTAATGATGAAAAGATTACGTCAAAAGTGTCGATAACCagggaaaataaaaacaaaccaacacAACTAGATATATTCGATTTTTCATCGGATGACGAACAACCTTTGgcgaaaacaattaaattaaaaaagactgGCACAAATAAAACAAGTCCTAGGAAAACAACTTCTCGTGGCAAGAAAGTCTcaccaaaaaaagaaacaattaaagAGGTTTCTAAAATAGTTGAGAAAAATGATAGTAAAGTAGAATTAAAGGATAGTATTAAAAAGAAAGCAAATGATGCAGAAACTCTTGTGCCAGACCTTGAAGACGATTcttcaaaatcgaaaataaagaGCTTAAGTAGCCAggctattaaaaattcaaagaaaaaagaagcTGATGACGGCATAAATGAATGTGACGCAGAGCCTATTCCACGTTCACCGAAGAAAGCACCAAACGCAAAGTCGTCTCGTAAAAAAACCAAAGTTGACAACACTACAGTTGAACATGAAATAGAAGATAAACAAAGCAGTCCAACTAGAAATCAAAGGCCATCACGTAAAACAAAAGAAGCAGCTGCTATTTACATGGGCATAATTGGTCACCGTTTGCAAATGGCAGAAGACGATGATGATTTATCTTTGAGTAGTTTCGATCGTCCAAACGTTCGTGAAAtggaaaaaatggaaaatgaacTGAAACGTAATAGCGCACCAATAGGCAAGGGCTCCCCTCCCCCAAGACACTCGAAATCAGCTGACATGCAGCACTCTTCTGTTATTCCTGTTGGTACACCGGCTGTTAGTGAAACAAAACCAACTACTGCTCGCCGAGGTCGGCCACCGAAACATCCTAAACAACCACCTGCACCAAAACGTGAAATCGAAGGAATGCTTGTAAAGAAAGGCGCTATTGCGAAGCTAACACAATCTACTGAAAATCTAGCTGATGGTAAAGACAGCAAAACAGCGCCATCTAAAACAGGTACAGAGGACGATGAAGACTTCTTGCTCAACGAAGAATTGAACGAAACAAAACGTAAACTTGAGAAAAGTTTTAGCGATTCCGATGATGAGCCATTGGCAATTAAGGCACATGTAAAAAGCGCCGATAAAGATGAGCCCTCTCCTAAATCTGCTGGTGGTAATGATATACCTCCTTTTGCATTACCAACACTAAGCGCTCCTTCTACAATTGGTGGAGGATTGAACAGTTTATCTATGTTACCATTAACTACAAAATGTATTATTGCTACAACACAGACTCAACCATTACTAACTCCTCCAACACTAACGCAAACATCAGTAGTAGCAACCTCTGTCGCGACACCAACATCAACAGCATGTCCTGCAGTAGGCGGTCCAATGAATACAACTCCATCACCAGTAAGTTGTAACATTCAGCCACCTGCTCCAGTAACTGCTTCATCGCAATCTCCttttaaaagtattgaaaagAAGTCTCCCGTACCAACTTCTAAGATTTTAAATGTGCCTGCTACATATGGCATTCCTCCAGCTTCGCCTACAGGTAATATTGCTGCtggaataaatacaaatttcgctAAATCGCCTATGTATGTACCACAATCTCCAGCACACTATCATTCTCCTCATACATCACATATAAGGCCAACAGTAAGTTTGCCACAATTTCCCGTTCAATCTGCGAAAAATCCCTCGCTTGTGGCACCTCCATCCAATACGGTCACCTCTCATCTGACAACACCTCCATCACAAATGACTGCCCAGTCAccaataaaatatcaaactcCTCCAACTACATATCCACCACCAATCGAGGCATACCCATCGCCAAAAATTAATCCCAACTTTTTAACGCCCAAATTTGATCGCAATACTCTATCTCGACCAGGAAATAGTGCTGGAAATAATGCCTTTCCGTCGCCTTCACCATTAAAATTTGATATGTCAGGTTCAAGTAGTGGCCTCCTTAAGAACTCTTCGCTTTCGGCACCGAATGTAACAATGAGTCCCAAGACTTTGATATCGAGCAATATGAATTTCATGGGAAATAATCCGGCTTCTTCAACTTCAATTGCAGGACAGATGAGCAACGATCCTTTGAAGGATGAAATAGGCAGTATATTAGCTGCTAATTTAATGCCAAGCAAAGAAGAATCAGGCAAAATTTTTGGTATCGCTAGTGTGAGCTTAGCGCAAAGTTCCGGTCCTGATAATACAAAATGTACATTGGGAAAATGCGGTTCAATTCATAAACCAGTCTTGGGCCCGGTAGTTCCAACAGAGACTTATATTGGTGATCAACTTTCTGGTAAAGAGAGAAGAAAAGCAAAAGTCAATATGACTCATGAACAAATACACAAATGGCTCATTGAGTGCTCTTCAAATCCAGATGAAATTCAAGATGATCTTGATGATGATTTTGATTCAGATTTGAGACCAAATAATTTTAGCTCGACGCCACCACCAACACGCGACGATAAGGAAAGTACGTCATTTAGCTCATCCTCGAAAGCCACTCGTGATTTAGGTAAAAGTGAAAGTGCTTGGTCTGCCAAAGGACCTTCTCTAAAAGCCACACCTGTTGTTGCTACTAGTAGTGCAATCAATAATAGAAGGGAAGATATAAAGCCTATTGAACCTACTACTCCTCCCCAACTGGATGAAGAGGTGGACAAAAATTCTCCTGTGTTGAATTTGATGTTTGATAAAGCACTTGCCAATAAAAAATCTCCGGCTCCTGGAAGTTTGGACGAAAAACTTACGCTGTCAGataaatctgaaaaaaataatgataaaaaggACAAGGAAGATAAAGAAATCACCAAAACACCAATAACcgatacaaaacaaaataaagcaattgaaaaagaatcttcctcaacaacaaacaaatcttCAGCAGCCGGCAAACAAAATTCTAATCAAAAATCGACAAATCTAAAGAAAATTCCGCCATCTCCTGTCACaactccaacaacaacaacagctgctAATAAACTAGCCAGGAAAAAGAATGCTTCTGAAATGACGGTAGAGAAACCTTCCAGTATCAATCAAAAAGAATCTGTGAATCCTCCAGAAATAGATTGTACTAATTCTATATCAAATTCTGTTAATCGTACTCCTAAGCGTACACTGGTCTATCAACAAAAGCAAAGtccaaagcaacaacaacaacagcagcaacaacaacagcagcagcagcttcaAAAACAAGATAACACGgacttaaaaatatcaacaactACAAGTCATAAACGTTCTACGACAACCTATGGCACCGCATTTTCTGTAGAGAACGAAAAATCCATTTACTCGTTTGATAAAGATGATGTTGAAGACCACGAGAAATCGAACAAACCCTCTACATATCGACGACAAAGCCGAAAAGATTCCCAAGTCGATAACAGCATCAATACGACTCTAACTACTGCAGAGCGAACTCCACCTGCAAAACCAAAGCGAAATGCTGCAGCTGTAGCAGAAATTGCCAATAAAGAATTGGCTGGCGGCAATTCTCAAACAAGTTCAGTATCATTGACTCTTAGTCCATCTGAAAAAACGAAATTGGTGAAAGTGAGCCTGGAAGGCGATAAAAGTACCAAGAACACGAAGGGAGGGAAAGGTGGCAAGAAAAATTTGCTGACTGAATCAAAGTCATCTGCCAAAGACGCTGGATCCGACTCAGGAGATGGCCACACATTTTATATACCGTTGCAAGGCACAGGCGCTGGCAGCGATGGTGACGGAGGTATTCAAGGTGTAGCAGTAAAATTGGGACGTGAGGGTCCCGATGGTCCCAACCAAAAAGTAATCATGCATGCTACCCTTGTAACCAAAGCTCAAATGGGATCTAATACTAAACCACTGCCAGACACTATGAATGTGTcggatattgtaaaaaatttaatgtcaaGTGATAAAAAAGGTTCAGGCGCATCCACATCTGCAGCTGCGGCCGCTGCAACGAACTCATGTTCTAATAGCTTGAAAAATGTACCAATTGGAACAGTACAACCGCGGTTCAAGGGAGATTCAGGTGTTCAAGGTCCATCTACATCTTCTGTTGGTGGAGTAGGTGGTGGTAGCGGTGCTTTACAACGTGTCAATTCCAATTCATCCTTATTTTCTGGCTCAGTTAAATCACGAAATGCTGTTGCCGTTGTGACTGCTACAGGAGGTGGAACGACAGGTCATGGctcgaataaaaagtttaaagacGATACACCCATTAAAATGGCAAATAATACAGCCTTTCCCCGTCATGATGATCCAACTCAAATGGTTGAAGCTCCTATATTCCGGCCCTCTGAAAAAGAGTTTTCAGATCCTATAGAATTTATAGAACGGATTACTCCTATCGCTGCCAGATTTGGAATTTGTAAAATCATACCTCCTGCTTCTTTTAAACCAGAGTGTCGCATATCTGATGAAATGCGTTTCACGGCTTATAATCAATATGTGCATAAATTGCTGCACCGCTGGGGTCCTAGTGCAAAAGAGTTAAgtgctattaaaaagtacttggcTACACAAAGTATTGTTATGAATCATCCACCTTGGATCGGTGGAATGGAAGTAGATTTGCCACGGCTATATCACACTGTACAGGAGCTAGGCGGTCTGAAAGAGGTAATTGAAAAGAAGAAATGGGCTCGTGTTgctgaagaaatgtgcattccGAAACTAGCGCAGGATCGCGTAACAAAATTAGATGACATTTATTGCAAATACTTACTTCCTTATGACACGCTTTCGCCAGCCGAACgacaaaaactttttgatgaAGTCGAAGCTGATTGGGCGAAACGAGAAGCACGTGCTAGACGTAATGCTGATCGATTTGTGAACACTGAAAGCGTTTCCAATGAAGAAGACGATGTGTCATCCGACAATGACGAAGAAGAATCTGAAGAAGAAGTTGATGGCGTTTCTATGGAATGTATTGTAAAGGGCCGGAGTATGCCATTAAGCCAATTTTATCGAATTGCTCGAAATACTATGGCGTTGTGGTTTAAAAATACCGAACCTACTGTAAACGAAGTTGAAGCAGAGTTTTGGCGCCATGTGGCTGTACGTGATAGTCATGTTTGTGTACATTCCGGTTCAATAGATTCCTCTGGCTGGGGTTTCGGTTTTCCAAGTCCTGGTCCTAAAGGAAAGGGATCCAATTACGCAAGACATCCTTGGAAtctgaaagtgttaacaaacaacaCCGGATCAGTGTTGCGTTCATTAGGACCCGTAATGGGTGTAACTGTGCCAACGCTTCATGTCGGAATGCTTTTCTCTGCGTGTTGCTGGTACCGAGATCCTCATGGATTGTCGTGGATTGAATATTTACATACTGGAGCATCCAAATTATGGTATGGTATACCAGATGATCAAAGTGCCAACTTTAGGGCAGCCCTGACATCTCTCATTCCTACGCACtgtcaaaataaaactatttggtTACCCTGTGATACTGTTATGGTACCTCCACATATGCTTACTGACCGAGGAGTGTCCTTATGTCGTATAGAACAAAAACCTGGAGAATTTATAGTTGTATTTCCCCGAGCCTATACATCAAGTCTAGCTACTGGCTATGTAGTATCGGAAAGTGTTTATTTCGCAACATCTTCATGGTTGGACTTGGCCAAAGACGACTTTAGAGATATTCACGACAGCTGCGAGCCTGCAATGTTTTCtttagaacaattattatttgcctTAGGTTATGATCAACGTGTTACACCTGATACTTTGCAACAGATGCTACCAATGCTACAGGAGGTCTTCGAGAAAGAAACTGCCGCCAGGGAGCAACTTAAGGCTGCTGGTGTAACTTCCACCGAAAAAGTGTCAAATGAAAAGAGTGGAAAaggtaaaaaacaacaacagcctCCATTCAAATCTATTGAAAGTGAATGCGATCTTTGCCGTGCAAATCTTTACATTTCAATGGTGAAAACTGATGAAGGCAACGTTTATTGTCTTCAACATGCTCTGAAAAATCTCAACAATGGCAATATTCAAGCCAAACAATGTAAACTTATCTACGCCTATAATATTGAAGATATTGAGAACCTCATTAAGAACCTGAAAGATAAAATACTACAGAAACGTGCTGTAGCTGgtaagaaacaaaaatag
Protein Sequence: MVVSKDSKRKRKESSPPATPQQQSSTAVESSPEMPKRTKVQAQRKFAQGQSAPQSSYSSIIAASSSSNTGPSTSSESREPPTEILPNKRPKTEDFLTFLCFRGSSALPPHLDFLNQGKSKEPERPVKKPTIKPVIKKKGRKGRPPKNAKQKEEKVSTKTEVDKIVLVPEENLANRNETEKKLDIPDKVQVGEDEEDDEDVPSFPVRKRAEVVAEGNRRSNRGNADDKCNNSVETSKRRSNRASTKESRVMHDHLSDDEDDEYVSTVDENSKAICSDIDTKDRKTIKTPINCGRKSETPSKESETTGRSRKGRPASNNKKKDAENSKENEKEESVKSDIKDKAPVKRPRQKESPIFIPSPEPSGRMTRQRAFFEPVKVIHKENEDTDGEIKKVTTEETVTEFKTKNSDSVGEVHEPTMVNDEKITSKVSITRENKNKPTQLDIFDFSSDDEQPLAKTIKLKKTGTNKTSPRKTTSRGKKVSPKKETIKEVSKIVEKNDSKVELKDSIKKKANDAETLVPDLEDDSSKSKIKSLSSQAIKNSKKKEADDGINECDAEPIPRSPKKAPNAKSSRKKTKVDNTTVEHEIEDKQSSPTRNQRPSRKTKEAAAIYMGIIGHRLQMAEDDDDLSLSSFDRPNVREMEKMENELKRNSAPIGKGSPPPRHSKSADMQHSSVIPVGTPAVSETKPTTARRGRPPKHPKQPPAPKREIEGMLVKKGAIAKLTQSTENLADGKDSKTAPSKTGTEDDEDFLLNEELNETKRKLEKSFSDSDDEPLAIKAHVKSADKDEPSPKSAGGNDIPPFALPTLSAPSTIGGGLNSLSMLPLTTKCIIATTQTQPLLTPPTLTQTSVVATSVATPTSTACPAVGGPMNTTPSPVSCNIQPPAPVTASSQSPFKSIEKKSPVPTSKILNVPATYGIPPASPTGNIAAGINTNFAKSPMYVPQSPAHYHSPHTSHIRPTVSLPQFPVQSAKNPSLVAPPSNTVTSHLTTPPSQMTAQSPIKYQTPPTTYPPPIEAYPSPKINPNFLTPKFDRNTLSRPGNSAGNNAFPSPSPLKFDMSGSSSGLLKNSSLSAPNVTMSPKTLISSNMNFMGNNPASSTSIAGQMSNDPLKDEIGSILAANLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTETYIGDQLSGKERRKAKVNMTHEQIHKWLIECSSNPDEIQDDLDDDFDSDLRPNNFSSTPPPTRDDKESTSFSSSSKATRDLGKSESAWSAKGPSLKATPVVATSSAINNRREDIKPIEPTTPPQLDEEVDKNSPVLNLMFDKALANKKSPAPGSLDEKLTLSDKSEKNNDKKDKEDKEITKTPITDTKQNKAIEKESSSTTNKSSAAGKQNSNQKSTNLKKIPPSPVTTPTTTTAANKLARKKNASEMTVEKPSSINQKESVNPPEIDCTNSISNSVNRTPKRTLVYQQKQSPKQQQQQQQQQQQQQLQKQDNTDLKISTTTSHKRSTTTYGTAFSVENEKSIYSFDKDDVEDHEKSNKPSTYRRQSRKDSQVDNSINTTLTTAERTPPAKPKRNAAAVAEIANKELAGGNSQTSSVSLTLSPSEKTKLVKVSLEGDKSTKNTKGGKGGKKNLLTESKSSAKDAGSDSGDGHTFYIPLQGTGAGSDGDGGIQGVAVKLGREGPDGPNQKVIMHATLVTKAQMGSNTKPLPDTMNVSDIVKNLMSSDKKGSGASTSAAAAAATNSCSNSLKNVPIGTVQPRFKGDSGVQGPSTSSVGGVGGGSGALQRVNSNSSLFSGSVKSRNAVAVVTATGGGTTGHGSNKKFKDDTPIKMANNTAFPRHDDPTQMVEAPIFRPSEKEFSDPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKLLHRWGPSAKELSAIKKYLATQSIVMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNTESVSNEEDDVSSDNDEEESEEEVDGVSMECIVKGRSMPLSQFYRIARNTMALWFKNTEPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGFGFPSPGPKGKGSNYARHPWNLKVLTNNTGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATSSWLDLAKDDFRDIHDSCEPAMFSLEQLLFALGYDQRVTPDTLQQMLPMLQEVFEKETAAREQLKAAGVTSTEKVSNEKSGKGKKQQQPPFKSIESECDLCRANLYISMVKTDEGNVYCLQHALKNLNNGNIQAKQCKLIYAYNIEDIENLIKNLKDKILQKRAVAGKKQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00741633;
90% Identity: -
80% Identity: -