Basic Information

Insect: Linnaemya tessellans
Gene Symbol: -
Assembly: GCA_951800035.1
Location: OX637532.1:135363075-135371825[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.052 9.7 8.6 0.7 1 23 1665 1688 1665 1688 0.94

2 12 2.6 4.9e+02 3.3 1.0 1 23 1851 1873 1851 1873 0.92

3 12 0.00074 0.14 14.5 2.8 2 23 1876 1897 1876 1897 0.97

4 12 3.6e-05 0.0066 18.6 0.2 3 23 1905 1925 1903 1925 0.98

5 12 7.3e-06 0.0013 20.8 5.8 2 23 1932 1953 1931 1953 0.97

6 12 8.3 1.5e+03 1.7 0.1 5 23 1966 1984 1965 1984 0.96

7 12 0.036 6.6 9.2 0.1 2 23 2023 2043 2022 2043 0.96

8 12 0.00023 0.043 16.1 0.3 1 19 2049 2067 2049 2071 0.95

9 12 4.9e-06 0.00092 21.3 1.8 1 23 2079 2101 2079 2101 0.99

10 12 0.00017 0.032 16.4 6.5 1 23 2107 2129 2107 2130 0.96

11 12 0.001 0.19 14.0 6.4 1 23 2135 2157 2135 2157 0.99

12 12 0.0028 0.52 12.6 5.8 1 23 2163 2185 2163 2186 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.052	9.7	8.6	0.7	1	23	1665	1688	1665	1688	0.94
2	12	2.6	4.9e+02	3.3	1.0	1	23	1851	1873	1851	1873	0.92
3	12	0.00074	0.14	14.5	2.8	2	23	1876	1897	1876	1897	0.97
4	12	3.6e-05	0.0066	18.6	0.2	3	23	1905	1925	1903	1925	0.98
5	12	7.3e-06	0.0013	20.8	5.8	2	23	1932	1953	1931	1953	0.97
6	12	8.3	1.5e+03	1.7	0.1	5	23	1966	1984	1965	1984	0.96
7	12	0.036	6.6	9.2	0.1	2	23	2023	2043	2022	2043	0.96
8	12	0.00023	0.043	16.1	0.3	1	19	2049	2067	2049	2071	0.95
9	12	4.9e-06	0.00092	21.3	1.8	1	23	2079	2101	2079	2101	0.99
10	12	0.00017	0.032	16.4	6.5	1	23	2107	2129	2107	2130	0.96
11	12	0.001	0.19	14.0	6.4	1	23	2135	2157	2135	2157	0.99
12	12	0.0028	0.52	12.6	5.8	1	23	2163	2185	2163	2186	0.96

Sequence Information

Coding Sequence: atggcgGAAAATGTTCAGTGTCCTGTATGCACTTTATACCTGCATGCCGGTATGAATCTTTCAGACCACTTGGAGACGCATCCGAAAGAACAAGTAATTCGTGCTCTAGTACAAATGACTATATCTGGAACAGGAGTTGGTAATAGTAAAAGTATTACGTTAGCATCTGCGTTAGCTGGTGAAAATGCAAAAGGTAATggcacaaaaattaaatcaactgATTTGGAAGAGAAGCCTTTCTCAAGTATTAAAGAAAGCGAGTTTGATATTAGCAGTGGAGGCAATAGTTGCAGTGCTAGTATAAGTAATTCCGCTAGCAATTGTTCATTGTCAAACCAAAGCGTTGGCAGTAGTCAAAATGCGAACAATGTTGTAAGTATTTCCGATACCAAGATTGAACGCAATAACGAAATCGATCATGAGAAAAGTATAATATGTCCATCCATTGTCCCGGTGAATACGTTGGTTAAGACCGAAACCTCTAACGCAGTTGAAATGACAAAGAATAATGTGCctggaaatgaaaatattgaccCCAGTTTTTCAAAGCAGAACTTCAACCCGACGCGCCTAATCTCAAATTCAACAACAACTGCAAGCCATGGATTTCATCGAAATTCAATCGAATTGACAAATGCAACACAAAATAtgcataataattttcatatatttggtAATAATACTCGCTATGAACAACAACAACGCAATAGCGTCAGTAGTCAAAATACACTATCTAATCTACCACACATGCCACCACCACCGCCACCTCCAGCATCTCCTCAAAGTCAACTTCCAGGTATTATAGCAGCTGGATCTAATGGAACATTTCATTCTATGCAGCCACAACAGTTGCCACCACCGGCCCCACCGCATATTAATTCGCCGCATGTAAGCAATTCTTCTACTAATACCCGTCAGGCACATATGTATACGGCTGGGCAACATCAGCAGTCTCCGACAATTTCTAATCATACGCAAAACTTAAAGGTTATATATACCCCTAACTTGCCACCACCTCCGCCGCTACAGctCTTTACTTATCAACCACAAACACATTTGCAACAGCATCAAAAACCCCCACCGGCCTATGGCGCTGCAATTAGTCAAATAAGATCTCAGCATAATCAAAGTAAGCATCAGcagcagcagttgcagcaacagcaaaatcatttgcaacaacaaacgctgcaaaataatttaagaatacaAGTACCACCGCCACCTACACCCCCAATTCCTACAAAACACATACATTCGCCAAAAATCAATGATTTACCAAATCAATCAACAACTTCTAGGCATAATCAATCGCAACAATCCCAGGTAGATTTGTCACAACGCCAACAGCAGCAGGAACATCAACAACCGCAAGTTATCTCGGAAAATGCACAGAATTCAAACAATCAGGTTTACAAttcacgtgaaattttaaacaaatctcCAATAAAAGGAACAGCTTCAGCGGTATCGCAAAATTCGAATGCGAATGTACCTCCACAGACGCAACTTTCTATTAGTCCTTCTACCGCTTCGGCTTCAATGGCAGCTGTAGCTGCATCAACATTAGGAAGACACACAAACTCACCATTTGCTGCATTATTAGCAGCAGCTGCTGGTGCTCCATCCCCTTCAAATACTTCTTCAGTTTTAAGATACGCAGAGTCGCCAGTAGCTCATTATTTAGAAAGGGAAAATGGTGACTTCATTGTACAAGAAACTCCAAAACATATTGTGGAATGCGTTGAAACAGACAATGGCGAATTTTCTGTCATTGAACGTATATATCAATCACCACCTAGTGTTTTACACATTCATGACGACAATGATGATGACGACGATGACGATGAAGGCGAAGAGGAAGATAAATGCAAAGATAGGATGGAAGATGAACAGGATGAAAATGCTGGTTGTAAACCCAAACCCCATGATATtaatgatgatgaaagtgaaAAGAGAAAAGACGAGTCGGATGATAAGCAAAGAAAAACTTCCTCGAAGGATGTCAAATCGAAGAAGACCAAAAGGAAAACTAATAACGATGCACAAATTTCAGTTGATAAAGAGATTGTTGATTTTGTAAGCATTTCTAGTGACAGCGGAGACGAGGAAGAATTCATATCTCAAGAAAGCAAAAACCATAAAATTATCAccgagaaaaataaaaaaaatctatcatCATCCAGTTGCAGCATCTCACTATCAACAATATCTACGCAGTCTTCATCGACGTCTTCATCTATATCGCCTACTTTAGCAATAACAGCAGTTGGTGATCTGCAAAATTCTACAACATCCTCGTTCTCCTCGTGTTCAACAAACTCAAATACAGCTTCCACACAACAAAATTCTGGAGTTACCACCAACAGCAACACAACTAGTCGAAAAAAATCATCTAAAAACACAATTACAGTTTTAAGCGATGTTCAACTGAATTTGAATGAATATTTGGAcctggttggaaatataattgcTTCGAGTAAAGTGGCAGCACAGCGTAAAACATTGGCATCCGTTGCTCCCATTCCTCTAGTTAAAATCGAAAAAGAAGAGCCAATGGATGAGTACATAGAAACAAATGCAACAATATCATCAGATGCAGCAACATCTGCAAATCCCGAGACAACGCCACCTCTAAAGGCCAACAAAAATGAGACTGAAGATATAACTGATAACCATAGTAGTAGTTATAGCAAAGAAACAAGAATTAATCATAATATAAGTTTAACAAATGAGGAAGAACAAGAAGAACAGGAAGAGAATAAACCACAAGTTTTAGTAAATACAACTGAGAATGAAACAACTTCAATCGCGATTGCCAATTCTTCTGCTAGCCTTATGACTATAAATTCCAGTCAAGTAACCAGTGTTATACGTATGGCCACAACTAGTCAACATCAGCAACAAGAACAACTGATAAATTCCGTGCGAAGCACTAAAAATCCTAACGAAGCTCAAGACTTATCACGATCACAACATACAGTTCAATCTACTGCAACTTTTAAAACGTCGGCCCATAACCCCATGGCTCGCAGAGgtccaaaaaaattagtaattaaGCCAAAATCTACAAAGACTGAAGTTTTAAGAACCTTAACTACTGCAAGCGAACCAAACCAAAATGAAACTAATGATGATAAAGAACTGCCTACTACTTCCTCTATGGCTCAGGAGAAATATACGAGAGAAACTTTGCCCGAAGAGGATCCGTTAAACACAGCagatataaaagttaaaaatgaaCCCATCACATCTATGACATATGAGAACCTACAACAGCAACCTCAATATCAATCGAGCTCAAGTTTCAGTATCTTAGAGCAGCATCTAAATTCAAAAGAGCCCATTCTCGAGTTTAAAGAGGAAAAGCCTTGCATAACTGAAGCTAGTTTGCCGTCAACCACAATCATAAAGGaaatgaaaatagaaaacaatGTTAACGACGATGCCCGTGTTCTATACGACTTTGCTAATTCCAAGAAAACACAAAACGAATCACTGTCTACTTTTCCATCTTCCACATCCCTTTTTTCAAGCAAGCAAACTTCCCCAGATATAACATCATTCGAAGGGTCCCACAGCCAACAGCTTTGCAAGAACATCAATCATGACAATGAGACATCATCCTCGTCATCATCATCGACATACTCTTCACAGTCAGCTATGGATGCTTCAATACCAGCTCAGGAACAAAACGAAAGTTCAGCTACAAGTGCTTCTGTTTCAACGACTGCTCAAAATCAGCACCAGTCAAATCATTTATATACTGACTTTCATTTTAATTACCTTTATAATCATGGTGGCAACAATGCGACTCCAGTTGCCACTGAACATGCCGACATTAAGAACCATCaacaattttcttcattttatcAAAATTCTACCAATACTAACAATAATGCAATGTTGCTGGAAGACTCATCTTCTAGTAAACAGTATACAGACTATCAACAATTCCAAAATAATCATAATCACTTGCAACAGCATCAGGTTGCTGCAACAACGCCCCACGATCAATGGTTTAACAATAGCAACTACCCCACGTCGGAGCCCAATGTTACACCAATTACTTCCAACCATTCAATTTCTAATATGAACAGTGCTTTATCCGTTGATGCTAACACCAGTGCATTAGATGGAAGCGAAACCGGTAAATATTTAGATTTGGATTCATGCAAACGAGAGCAAGGCATTGATATTAATGTTGGCAATCGGGGGACAGTACCACCGCCGCCACCACCATCCTCCACAACTTCCTGTTCGTTTAGTGGTACAACTGACAACAGTATGGCGGGTATTTGTTCGACTGCGGCCACTCTGAATATACGTACAGATGAGAAAATGCCTGCTAAAGGTGAAATTTCCGAGCAGGAAAGTAATTGTGACATTGATAATTCCTGGAGTCAACCGATGTATGGTGATATCTCGGCACGTTTCTTCAAGACAACATTTCCCACAATTTTTCCGCAAGACAACGGTTGGAATCATGAAGAATATTTCACTGTACAGGATTTGAGCGCATCAACAAATGCTCAAGCTACTAGCAGCGGAAACAGTAGAATGAAAAGcTTTGAGCAAACCAGTAGCAACAGTAATAACATAAATGGAATTCCAATATTTTCCCAAAACTCAAATGACAATTGCAACATCGATGTTATGCCATCAACATCATCTAAAATACGTAAGAGGCGTAAGCGCACTTCACAAGACGGCAAAACGTCACAAGCTAATAGCAAGAGGTTGCAACCAACATCGACCGTAACGTCTCAGCAAATGTTAATGCAACATCAAAATGAGTTACCGGGAATTGAATTCAGTTTCCAACAACATCAGCAAATTCACTTACAGCAACAGCACTTGCAGCAACCAAGTACATCTGCAGCATTTTTGGCAGGACCATCAAATGCAGGCACAGACATAGCAACTGGATTTGTtgtgcaacaacaacagcaacagcagccttcacaacaacaacaaaaacaacgcaCAAAAGTCTATGAATGCGGACATTGCAATGCCAAGTACTCTAAACTTAAAGACCGCAATGCTCACATGATTGATATTCATAATTATATACGTCAAAATAGAAGGCTGGTATGCCCTACAACTGGTCTTGCTACTCCTCTAAATAATCCTGATATGCAAGATGTTGCTCTACCCACAACGAGTGCAGCTGGTAGCACTGTAACTCCTGGCTTACAAAATGCCGACTGTGTGGGCGATTGTAAACAGGGCATCgttaaaatagaaaatgaaaATCCCCAAAGTGATCTTCCTGTGGAAGATCcaattaatgccaatttaagTGCTAAAACTGAAATTATGGAGGATGATAAACAAAACCTTACCTTAGTGTCTATGAACACTTCAAATGTTGAAACAATTCTGGAATACGATACTAAACCACCAAGCACTAATTTGCCACTATCACTGACGACTCCCAGCAGTAAATTAACAACACTATACCGTATGCTGGTTTCGTTCAATATGACaacattaaaacaaaaccaaaacctTTCAGAGTTCGacgaaaatctaataaaatcatcaatatttttttgttacatttgtCGGCAGAATTTTAATTCAGTAAAATTATACGATGCTCATTTGACTGATCATCCAGCTGAATGTTTTACTTGTGGAAAGAAATTCCAGCGATGGAAAAATTTCTCGTTGCATTTAAAGCGACATTTAGGTTGGAAGGAATTTGGTTGTACCGTATGCGATAAGAAATTTGTTGTACGAAGCGCTCTCGTTGAACATATGCGTATGCACTCCGGACTGTCTCCGTTAAAATGCAAAGTTTGTGGCAAACACTTCAAGCGCTATTCGAACTTAACACAGCATCGCAAGCGGCATACGAAACAAATTATTCGAAGAAAGGAGTATGTTTGCTATTGTGGAGAAGTTTTACCATCTAAAGCACGTTTCTTATGGCATAAAGAAACTCATGATTCAAAGCCAAAATGCTGTCCACATTGTTGTGATCGTTTTGTGCATGTCAACTCTTTGCGGCGACACATACGCCTCGCACATTCGGATAAATTCGATTATACCGAACCGATGGAGTGCccaatatgtaaacaaatatttgctAAAGCCTCTATGAAAGCACACATGGCGACGCATTCCACAGAAACACAATATGATTGTGCTATTTGTAGCAAGTCCTTCTCAACaaaatggaatttaaaaatacattccTGGGTACATGCAAATCGCACAGCTAAACCATTCAAATGTGAACACTGTCCCAAGGCATTTGTGCGCGAAGTTGACTTCAAGAATCATATGAATTcccacaaacaaattaaacccTACACGTGTGAAGTGTGTGGCTGTAAGTTTATACGCAAATATAATTACATGCGCCATAGAAGAGAGCATCATGGCAATAAAAAGTATACCTGTGATCTATGTAAAAAGTCGTTCCATCGTCATTACTATCTTATCGAACACAGACGCATTCACACTGGCGAAAGACCTTTTCAGTGTTCGATATGCGGTAAAAGTTCAACAACCAAAACTAATCATAACAAACACTTAAAAATTCATCATTCACGTGATCCCTTTACGGTGGAAGTTTAA
Protein Sequence: MAENVQCPVCTLYLHAGMNLSDHLETHPKEQVIRALVQMTISGTGVGNSKSITLASALAGENAKGNGTKIKSTDLEEKPFSSIKESEFDISSGGNSCSASISNSASNCSLSNQSVGSSQNANNVVSISDTKIERNNEIDHEKSIICPSIVPVNTLVKTETSNAVEMTKNNVPGNENIDPSFSKQNFNPTRLISNSTTTASHGFHRNSIELTNATQNMHNNFHIFGNNTRYEQQQRNSVSSQNTLSNLPHMPPPPPPPASPQSQLPGIIAAGSNGTFHSMQPQQLPPPAPPHINSPHVSNSSTNTRQAHMYTAGQHQQSPTISNHTQNLKVIYTPNLPPPPPLQLFTYQPQTHLQQHQKPPPAYGAAISQIRSQHNQSKHQQQQLQQQQNHLQQQTLQNNLRIQVPPPPTPPIPTKHIHSPKINDLPNQSTTSRHNQSQQSQVDLSQRQQQQEHQQPQVISENAQNSNNQVYNSREILNKSPIKGTASAVSQNSNANVPPQTQLSISPSTASASMAAVAASTLGRHTNSPFAALLAAAAGAPSPSNTSSVLRYAESPVAHYLERENGDFIVQETPKHIVECVETDNGEFSVIERIYQSPPSVLHIHDDNDDDDDDDEGEEEDKCKDRMEDEQDENAGCKPKPHDINDDESEKRKDESDDKQRKTSSKDVKSKKTKRKTNNDAQISVDKEIVDFVSISSDSGDEEEFISQESKNHKIITEKNKKNLSSSSCSISLSTISTQSSSTSSSISPTLAITAVGDLQNSTTSSFSSCSTNSNTASTQQNSGVTTNSNTTSRKKSSKNTITVLSDVQLNLNEYLDLVGNIIASSKVAAQRKTLASVAPIPLVKIEKEEPMDEYIETNATISSDAATSANPETTPPLKANKNETEDITDNHSSSYSKETRINHNISLTNEEEQEEQEENKPQVLVNTTENETTSIAIANSSASLMTINSSQVTSVIRMATTSQHQQQEQLINSVRSTKNPNEAQDLSRSQHTVQSTATFKTSAHNPMARRGPKKLVIKPKSTKTEVLRTLTTASEPNQNETNDDKELPTTSSMAQEKYTRETLPEEDPLNTADIKVKNEPITSMTYENLQQQPQYQSSSSFSILEQHLNSKEPILEFKEEKPCITEASLPSTTIIKEMKIENNVNDDARVLYDFANSKKTQNESLSTFPSSTSLFSSKQTSPDITSFEGSHSQQLCKNINHDNETSSSSSSSTYSSQSAMDASIPAQEQNESSATSASVSTTAQNQHQSNHLYTDFHFNYLYNHGGNNATPVATEHADIKNHQQFSSFYQNSTNTNNNAMLLEDSSSSKQYTDYQQFQNNHNHLQQHQVAATTPHDQWFNNSNYPTSEPNVTPITSNHSISNMNSALSVDANTSALDGSETGKYLDLDSCKREQGIDINVGNRGTVPPPPPPSSTTSCSFSGTTDNSMAGICSTAATLNIRTDEKMPAKGEISEQESNCDIDNSWSQPMYGDISARFFKTTFPTIFPQDNGWNHEEYFTVQDLSASTNAQATSSGNSRMKSFEQTSSNSNNINGIPIFSQNSNDNCNIDVMPSTSSKIRKRRKRTSQDGKTSQANSKRLQPTSTVTSQQMLMQHQNELPGIEFSFQQHQQIHLQQQHLQQPSTSAAFLAGPSNAGTDIATGFVVQQQQQQQPSQQQQKQRTKVYECGHCNAKYSKLKDRNAHMIDIHNYIRQNRRLVCPTTGLATPLNNPDMQDVALPTTSAAGSTVTPGLQNADCVGDCKQGIVKIENENPQSDLPVEDPINANLSAKTEIMEDDKQNLTLVSMNTSNVETILEYDTKPPSTNLPLSLTTPSSKLTTLYRMLVSFNMTTLKQNQNLSEFDENLIKSSIFFCYICRQNFNSVKLYDAHLTDHPAECFTCGKKFQRWKNFSLHLKRHLGWKEFGCTVCDKKFVVRSALVEHMRMHSGLSPLKCKVCGKHFKRYSNLTQHRKRHTKQIIRRKEYVCYCGEVLPSKARFLWHKETHDSKPKCCPHCCDRFVHVNSLRRHIRLAHSDKFDYTEPMECPICKQIFAKASMKAHMATHSTETQYDCAICSKSFSTKWNLKIHSWVHANRTAKPFKCEHCPKAFVREVDFKNHMNSHKQIKPYTCEVCGCKFIRKYNYMRHRREHHGNKKYTCDLCKKSFHRHYYLIEHRRIHTGERPFQCSICGKSSTTKTNHNKHLKIHHSRDPFTVEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01138377;
90% Identity: -
80% Identity: -