Basic Information

Insect: Linnaemya tessellans
Gene Symbol: -
Assembly: GCA_951800035.1
Location: OX637534.1:110213402-110215349[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.035 6.5 9.2 0.6 1 23 283 306 283 306 0.92

2 9 4.9e-06 0.00091 21.3 1.5 1 23 338 361 338 361 0.98

3 9 0.00055 0.1 14.9 4.1 1 23 370 392 370 392 0.96

4 9 0.0001 0.019 17.1 0.1 1 23 400 423 400 423 0.94

5 9 1.5e-05 0.0028 19.8 0.2 3 23 431 451 430 451 0.98

6 9 0.061 11 8.4 0.1 3 23 461 482 459 482 0.93

7 9 4.2e-05 0.0078 18.4 0.1 1 23 490 513 490 513 0.97

8 9 3e-06 0.00056 22.0 1.1 1 23 519 541 519 541 0.98

9 9 1.5e-05 0.0028 19.8 1.7 1 23 547 570 547 570 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.035	6.5	9.2	0.6	1	23	283	306	283	306	0.92
2	9	4.9e-06	0.00091	21.3	1.5	1	23	338	361	338	361	0.98
3	9	0.00055	0.1	14.9	4.1	1	23	370	392	370	392	0.96
4	9	0.0001	0.019	17.1	0.1	1	23	400	423	400	423	0.94
5	9	1.5e-05	0.0028	19.8	0.2	3	23	431	451	430	451	0.98
6	9	0.061	11	8.4	0.1	3	23	461	482	459	482	0.93
7	9	4.2e-05	0.0078	18.4	0.1	1	23	490	513	490	513	0.97
8	9	3e-06	0.00056	22.0	1.1	1	23	519	541	519	541	0.98
9	9	1.5e-05	0.0028	19.8	1.7	1	23	547	570	547	570	0.96

Sequence Information

Coding Sequence: atgGAGTCATGTTTGTTGTGTTTGGAAATAAACAAAGATATATTAGATTCCATCACTGCAAATTCAAAACAATGGCAGGATCTTGACATAACTAAAACGATTGAAAAACATTTCTGGTCCTTGaacacTATTCTTCCAAACTCATGGATCTGTTTATCATGTTGGCGAGAAATAGACGGGTTTCATAAATTCTACTTGCGCATAGAAGAGGCTCATGTAAATtttgggaaaataaaattggaaGATTTAGTGGTGTCTGTGGAATGTAAAGAGGAATTAGTACAAAGTTCATGTATGAATGATGGTAATAAACGAGAATTGGGTAAAGATAATTTGGCGCTATGTTTTTTAGAGCCGGAAATACTAATAGACCAATCTCAGACAGAACCAGAAATAGTCATAGACCAACCGCGTACTGACAACTTGGTAGTTGAAAGAGCAGGTACACTGAATGAGCATACCAATGAACTTGACCTAGATGATATGCCACTTAGTCAGGCACGGAAACGACTGAGACAACAAAGTATCATAGCAAAGAGAGATCCTCTTGAAAAAGCCAACAATTCCAAACAAAAACGAAATTCTAGAACGAAAGTAACCGCAAAAGAAAAGTCAAGAGAAAAGACGGAAGATATTGTAGTAAAAGTAGAGCCAACTGATTTAAATGACAATGATTCTAGACTTATTGCTGATGACAATGATGCTTCCGATGTAAACTATCAGCCAGATAAGGATACCTCAGACAATTCAGACTGTGAGAAAGACAAGGCTCAGGGTCTACAAAGCATAAAGCGCAAAGAAAACGATAAATTTATAGTGGAACATTTTAAACTGCTCGGCTTTAAGTTTGTATGCGACCTTTGTCAAGTTCCTTTTAAAGACTTTACATCCATGATGAAACACTTTGTTAAGGATCACAAACAGcgtggttatgttgtttgctgtaatagaaaaatttacGATCGTAGCCGTTTAATAGATCACCTGCACTGCCATGTAAATCCTGATCATTTTAAATGCAACGAGTGTGGCAAATCCTTGTCCGATCGTATGACATTTAAAAGTCACATGCAGCGTGTACATAGGGCACATGAGGTTGTTAGGCAACATTGTTGCGACATATGCGGCAGATCCTTTGCAAAATCGTATGTACTTAAAATGCACAAATTAACTCATATACCGGAGgaggaaaaaaagtttcctTGCAGCGAATGTGGTAAAAATTACGGCAGTCCTTACCAACTTAATTTACACAAGCAAGCTGTACATCTTAAGTTATTTGCTAAAATATGCAATATATGCGGTAAAGTTGTAAATTCAAATGCAGAATTTAAGGTTCATATGAATAAGCACGAAGGCATTTCGCAGCCAGTTATCAATTGTGATGTTTGTGGCTTACGTTTGACTAGTGAACGTGGCCTTAAACTGCACAAAGCTTCTCAACATCCAGCTGGAGGGAAAAAAGAACATCCCTGTCCCATCTGTCCCAAAATATCACCAACTCTTACGGCGCTTAGAAAGCATATAAATACTATGCATATTAAAGGGTATGATCACAAATGTAGCATCTGTGAAAAGGCCTTTAGGAAGGCTGAATCATTAAAGGAACACATGGCCTCACATACCGGAACTTTCTTATATTCATGTCCATGGTGCCCAAAGACGTTTAATTCAAATGGTAATATGCATGCACACCGCAAAAATAAACACCCTAAAGAATATTTAGAattaaaactacaaaaatataattag
Protein Sequence: MESCLLCLEINKDILDSITANSKQWQDLDITKTIEKHFWSLNTILPNSWICLSCWREIDGFHKFYLRIEEAHVNFGKIKLEDLVVSVECKEELVQSSCMNDGNKRELGKDNLALCFLEPEILIDQSQTEPEIVIDQPRTDNLVVERAGTLNEHTNELDLDDMPLSQARKRLRQQSIIAKRDPLEKANNSKQKRNSRTKVTAKEKSREKTEDIVVKVEPTDLNDNDSRLIADDNDASDVNYQPDKDTSDNSDCEKDKAQGLQSIKRKENDKFIVEHFKLLGFKFVCDLCQVPFKDFTSMMKHFVKDHKQRGYVVCCNRKIYDRSRLIDHLHCHVNPDHFKCNECGKSLSDRMTFKSHMQRVHRAHEVVRQHCCDICGRSFAKSYVLKMHKLTHIPEEEKKFPCSECGKNYGSPYQLNLHKQAVHLKLFAKICNICGKVVNSNAEFKVHMNKHEGISQPVINCDVCGLRLTSERGLKLHKASQHPAGGKKEHPCPICPKISPTLTALRKHINTMHIKGYDHKCSICEKAFRKAESLKEHMASHTGTFLYSCPWCPKTFNSNGNMHAHRKNKHPKEYLELKLQKYN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00900864;
90% Identity: -
80% Identity: -