Ltes027312.1
Basic Information
- Insect
- Linnaemya tessellans
- Gene Symbol
- Usp36_1
- Assembly
- GCA_951800035.1
- Location
- OX637533.1:126004680-126018422[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-22 6e-19 70.6 0.0 2 58 57 113 56 123 0.91 2 2 8.5e-53 4.2e-49 169.2 12.3 104 218 127 241 112 241 0.92
Sequence Information
- Coding Sequence
- ATGTCTGAACTTTGTAGCAATGACAATCGGACCGATGTCTTCCATGAAGCTATGAAAGTCTTGGAAATTGACGTTCTGTCTATAGGTGAAAATACCACAGaaagcaaagttcttgttgaagaACCCTCTACTTCAGGACCACCGATAAAAACTCCAGCGCTGATCAAAGCAAAAGGACCAGTTAAGTTTGGTACTGtccaagttttttattttccccGCCAGCAGGGTTACAGCTGTGTTCCCTCCGCTGGCGGTTGTACTCTAGGGATGGAAGCTAGGCATATTGCCTTAAAAACATGGACAGTAGCTGAACATGCGGCCGAACTGCGGAGAGGTACCTTTagtgaagaaaataatttaagtgAGGGTATTGGTGCAGATCTGAACGGAGAAGCAAAAGGTGTTCTAAAACCTCTTCCACCGAGACAAAGAAGGGCATTGCTTAAAGCCGCTGGCATACGTACCATTGATGCAACTGAAACGGCTGAATGTCgcaaaatacggaatagccGAGAAGCTTGTGGTTGTACTTGTCGGGATTTTTGCGATCCCGAAACTTGCTGTTGTTTCCAATCTGGGATTGAATGTCAAACTGACAGCAATATGTTTCCTTGTGGCTGCTCCAAGGATGCCTGTGGAAACACAATCGGGCGTGTCGAATTTAATCCAACAGATGTACGAACCCGTAATGTACATACCCTGAAGCGGTTAGAAATGGAGAAACTCTACAAGAATCCCAAAAGAGTCAATCGCAAAGCTGATACAGTAGATGAAGCATTGGAGGGTTACTTTTCACGTGAACGTCTCGAGGATATGGGATACAAATGTGAAGCTTGTAAGAAAAAGGTATCTGCTACcaaacaattttctttggaaCGTGCACCAATTGCCTTGTGTATACAGTTGAAGCGCTTTTCCATGTTGGgcactaaattaaataaacaaattacgaTAAAACCTAGATTGGATCTAACAAAATTTGTCTCACGTAAAACTCCTGGTGAGAAACTTTCCTATTCCCTGGTGGCAATGGTAACACATTTGGGAGCCTTAAAACATTGTGGTCATTATACAGCCATTGGCTTAACAGAATCTGGCACATACTACAATTACGATGATAGTTATGTACGACCAATATCAATGCAAAATGTGTGCAATACAAATgcctatataatattttatgaaatgggTACACAGTTACCAAGAAATGTTAGCAGCACGCAAGTGAGTGGCTCACAAGCATCTGCTGCTTCAATTATAAATCAAAAGGTTTTGCAGCCGATAAAACTGAATGGCCATGCCGTGGAAGGGTCTCAACAACGCATAATAGGACCTCAACTACCAACTGGATACAATAATACCAACTCAAATGGGGGAAACTTTTCGCCACTTACGAACGGTGGCAATAAATTTATATCGAACAGTAGCTCGGCATTAGTACCATCAAATTCGTTAAACACACCGTCATCAGCATCATCAAATGGTGGATGTAGTAAAATAATgtttcatttcaaaaatattagctACGATAGCAGCAACAATGGTACTTCAACAAACTTAGTTAAGACAAATGCTGCAACAACTTCAATTAGTAACGCAACGCCCAATTCAAGTTATTATTATGCATTCACGAAATTTTGTTAG
- Protein Sequence
- MSELCSNDNRTDVFHEAMKVLEIDVLSIGENTTESKVLVEEPSTSGPPIKTPALIKAKGPVKFGTVQVFYFPRQQGYSCVPSAGGCTLGMEARHIALKTWTVAEHAAELRRGTFSEENNLSEGIGADLNGEAKGVLKPLPPRQRRALLKAAGIRTIDATETAECRKIRNSREACGCTCRDFCDPETCCCFQSGIECQTDSNMFPCGCSKDACGNTIGRVEFNPTDVRTRNVHTLKRLEMEKLYKNPKRVNRKADTVDEALEGYFSRERLEDMGYKCEACKKKVSATKQFSLERAPIALCIQLKRFSMLGTKLNKQITIKPRLDLTKFVSRKTPGEKLSYSLVAMVTHLGALKHCGHYTAIGLTESGTYYNYDDSYVRPISMQNVCNTNAYIIFYEMGTQLPRNVSSTQVSGSQASAASIINQKVLQPIKLNGHAVEGSQQRIIGPQLPTGYNNTNSNGGNFSPLTNGGNKFISNSSSALVPSNSLNTPSSASSNGGCSKIMFHFKNISYDSSNNGTSTNLVKTNAATTSISNATPNSSYYYAFTKFC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -