Ltes036275.1
Basic Information
- Insect
- Linnaemya tessellans
- Gene Symbol
- -
- Assembly
- GCA_951800035.1
- Location
- OX637534.1:81143218-81143529[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.3e-09 2.3e-05 25.8 0.0 5 35 13 44 9 46 0.93 2 2 2.6 6.5e+03 -1.3 0.0 2 21 57 78 57 78 0.66
Sequence Information
- Coding Sequence
- atgcctaaaaaaaacaattcatatgAAGAAAGTCTTCTGCAGAAAGCTCTGTCCGAAATTAAGGatggcaaaatttcaaaaaaagctgCATCAAAAACTTATGGGATTCCACGGTCCACGCTACAATTTCGTTTAGGCCCTAAATGTTCTAAAATTCGACCAGGTCCACCAACCATTTTAACAGAAGCAGAAGAAGAAGTCATTGTCGATTGGGTGAAAGTCTCTCAGCGGAAAGGTCTTCAAAAAGAAAGGAAGACGTACTCCATGCCGTTAAAGACTTTAATAGGGTGCCACTTAAATCATCGTTGTTAG
- Protein Sequence
- MPKKNNSYEESLLQKALSEIKDGKISKKAASKTYGIPRSTLQFRLGPKCSKIRPGPPTILTEAEEEVIVDWVKVSQRKGLQKERKTYSMPLKTLIGCHLNHRC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -