Ltes008565.1
Basic Information
- Insect
- Linnaemya tessellans
- Gene Symbol
- -
- Assembly
- GCA_951800035.1
- Location
- OX637532.1:86454316-86456241[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-08 9.5e-05 23.8 0.0 5 41 13 50 9 53 0.93 2 2 0.042 1e+02 4.5 0.0 26 44 194 213 193 214 0.91
Sequence Information
- Coding Sequence
- atgccTAAGGAAAGCAACACATATGATGAGAGCCTTCTGCAAAAAGCACTGTCGGAAATTAAACAAGGGACAATTTCGAAAAAAAGTGCTTCGAAAACATATGGTATACCACGGTCAACGTTGCAATTCCTTCATGCTCGGGAACACCCTTTTGGTGAAGACAATTTACCAGGCAAAGGATGGTTTAACTCATTCCTTAAGCGGCACCCAACTTTAACATTTAGAGCTACCGATGCCGTTTCAACTGCCAGTGCTAATGTAGGTGCTTCTGATATTTTCGGCTGGtttgaaaaaatagaaaactacTTAGTTGAAAACAACTACTTCAATATACTATCCGACCCTACCAGGATATATAATGGAGACGAAACTAACTTCATGCTGTGTCCCAAAACCAAAAGCGTACTAGCAGCAAAGGGATCGAAAAATATTTACGAAGTTGATAAGGGTGTAGCAAAATCTAACCTAACGGTAATGTTTTCGTTTTCTGCGGCAGGAATCATTACACCACCTATGATCATTTATCCTTACAAAAGAATGAGGGAAGAAATTCGAGTGACTATTCCAGAAAATTGGGGCTATGGCATAAGTGACAATGTTTTAGAATGGCGTCGTAATAATCCTCATAACTCTTTAACAAGAGAATTATTTGGTCCTCTGCTGAAAAAAGTGGTAGACAATAGTCTAAGCTCTGAAAGCATGAAAAACGGATTTAGAGTATGTGGTTTATATCCTTGGAATAAAACAGCCATAAACTTATCGAAATGTTTAGGTAGATCAAGACAACCATTGTCTAAAAGTCATGACACATCAGATAGGAATGTCTTTAGAAAAAATTGTACTATTCTGGGAGAAGAAAAGGTTAAACTTTTCGATCAAATATCTGAAGAACAATATTCACCAGAGAGAACGGAGGATTTCAAAGCCTTACATAAGCTATATTGCTACTTTAAGACCAACAACTTCGAACctaaagagaaaaaaacaatGAATGATACTGCCTCGCAAACCGATTCTCCAAACCTATGTAATAATATATCTAACATTGATATTGCTGCTATCAATGACTTTGTGTTTTTAGAAGATGAAAATATCGAAGCAATAATACCGCTGGAATTGCCTGCCCATGAAATAATTACTACGTCCAAGAACTTTTCTCTTCCCATTTCTGTAAAGCAATCTTCGACGAGTATGAATGACATATTAGATTGGCCGGAAACACCAATTAGAAAAGGAATGAAGGTTCAGAAAACTAAAAAGAGTTTTGTTATCACCAATTCTATTTGGATAGCAGAAGAGACTAAACAAACATTCAGCTCTGCTAAGTATGGAAGTCACATCAGAAATCTCTTCACAGATGAAACCGAGGAAGAAATTGGAGAAAATGTTTTATGTGCTGGACAAATGTGTTTTTCGTGCACCTTTACCATGTCaaccgacattaaataa
- Protein Sequence
- MPKESNTYDESLLQKALSEIKQGTISKKSASKTYGIPRSTLQFLHAREHPFGEDNLPGKGWFNSFLKRHPTLTFRATDAVSTASANVGASDIFGWFEKIENYLVENNYFNILSDPTRIYNGDETNFMLCPKTKSVLAAKGSKNIYEVDKGVAKSNLTVMFSFSAAGIITPPMIIYPYKRMREEIRVTIPENWGYGISDNVLEWRRNNPHNSLTRELFGPLLKKVVDNSLSSESMKNGFRVCGLYPWNKTAINLSKCLGRSRQPLSKSHDTSDRNVFRKNCTILGEEKVKLFDQISEEQYSPERTEDFKALHKLYCYFKTNNFEPKEKKTMNDTASQTDSPNLCNNISNIDIAAINDFVFLEDENIEAIIPLELPAHEIITTSKNFSLPISVKQSSTSMNDILDWPETPIRKGMKVQKTKKSFVITNSIWIAEETKQTFSSAKYGSHIRNLFTDETEEEIGENVLCAGQMCFSCTFTMSTDIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -