Lhum010491.1
Basic Information
- Insect
- Linepithema humile
- Gene Symbol
- CSRNP3
- Assembly
- GCA_000217595.1
- Location
- NW:643692-653620[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1 1.1e+04 -5.1 1.7 58 108 98 148 90 158 0.47 2 3 1.3e-101 1.4e-97 325.1 9.1 1 218 710 923 710 923 0.91 3 3 0.0084 91 2.1 8.4 38 88 1138 1189 1128 1218 0.47
Sequence Information
- Coding Sequence
- ATGGCAGAAACACCCGAGATGGAATCGCCTTCGGCCCGTCAGGATTGTCTCGTTGAGGCCCAAGAGGATTCCACCTCAGTGGAGCCCGAGCCGGGAAGCGCATTACCGCCGAGCGAAACGACGTcgtcgacgacggcggcggccaCGCCGCCAGCAGCAGATGACGTCGCCGAGGACGAGCGGCGATCTGTTATGCAAAACTCGTGCGAAAATCTGGTGATGGTGTGCGAGAGACTGGACGAGAAACCCGATGACGCGGGACGACCCGAGGACGAGCAATCGAGCGATTGTTCTCGCGCCTTGAAGCAAGAGGCGGAGAAGGAGGTTGACATGGGTCCGAAAATGGGGAAGGAGGTCGGCGAGGAGGACGAAGGTGATTCGACGGAGGAACCTCTCGAACCCGAAGAGCCCTCGAAAGTGAATTCCGAGGATGCGGAAACCGAAACCACCGCCAGTGTCTCCCGGAAGAGGCCGGCCGGCAGCGATTTTCTGCCGATCGGCGCGGAGATCAAGCGGATCGGCGTCGAGATCTCGGAGGAGGAGGCGACGCAGCGGCGAAACGACGTCAGGCGACTGTCGCCGGTGCTGGTGAGCCAGCGGGAGCGCACTCTGGGCGAGGTGTCCTTGACCGCGGAGTCCTGCCTCTTCGGAATGGACAACGACGGAACGGGCGATGACGCAGAATCGCCATCTCCGCAAAACGAGATTAAGGACGCGATTGTCGAGAAGGAAACACTCGGGAGGATCGACGCGAGTCCTTTGACGGAGTGCGCGAGCGGCAATAACGAGGACATTTCGGACCGCGCGATCGGAAAGGTGAATTACGACAGCGAAGAGGAAATTCTCGGCGCAGCTTCTTCCGCGTCTTCGAGGTGCAACGGCTTCGACGGCGAAACGGCGGAGTTGCGTCCGGACGATGTCGCGGATGCGAACGACGAGATCGCACCCTGCGCTCTAACCGAGAAGAGCATCGTCGAAGGGATGACGAGTCCGACACCGTCGAGTCCCTCTTGTCGACGTTTGATGGTGGTGCTGAACCGCTGCGAGGAGGCGGAtttgaagaagaaagaaatcgAGAAGCTCGGTAAGGACGCGTGCGATCGTGTCGCGGAAAAGAATTCTCCCGAAAGCAGAAGTTCCGTCGACGAGGAATGCGACTCGCAAATTAAGGAAACTCCGAAGAAGCAGAGATGGCAGGGGGACAACAACTGCTCGCCGACGACCAGATCGAAAAGAAGCGAGTCGATGGAGAACGTACAGAGTCCGGACAGTAGTCCGGTCTTGAAAAACTGCACAGTTGTGTTGGAGCGAATGATCGAGATGAGGCAGCAGGCTCACTCGGACGATGCCGAAGAGGACGCGAGAATTTCGAAGAAAGTCGAAAAGGAGTCCGCGGCACCGGTGGCGGTGATCGGTAAATTGGGGGAAAACGAGGAAGTAGTGTTGACGAGCTCTTCGCCCGCCGACGAAGACGCGCGTGCATCGCACGAATTAGATTCGACGGAGACGATGCCGAGCTCGCCGGAGGAGACGCAGGAGGCGCCGCCGACAGACGTCGCCGAGGCAGTCGACACCGAGACGGAGACGGAAACGGGCTCGGACAGTTCAGAGGTGTCGCTCAGCATCGCGGGCATCCGCGAGCTGCGCGACGTCGACGTCGCGTCCTCTGAGCTGCCCTGCTCCGAAGCGGAGCGAGGCGAGCTGTGCTGCGTGGAGGTAGCGATGGCGCCGATCATGACGAGGCTGGAGGCCGAGCGGCCGGAGCCCTACACCGAAGACTCCGCCGAGAGCCTGGCCCTGGCGACCGGCGCTAGGGATGAAGTCAGATCCGACGGGAGTGACTCTGGTTTGGGGAACGAGATCGTCGGCGATCCTGGACCGGCACCGGCTCCTGAAAGCGATTCGGAAACATCCTTCCTCGACAGACTGCCGGACGACATCCTTTCCGATAAAGAGAAAGGCGTGAACCAGCTGGACAGCTTTGCGGCGTCGTCGGGCGCGTCCGGGACGCCGGGTCAGCCGCCTCTAACGAGCTTCCGAACGCTACCGGCCAAAAGTAACCTGAAGCGCAGATTGACCGATTGTATGGAGAGCGATGAGTCGCGCAGTAATGCCGACGAGCCCGTAAAGAAGAAACGCAACATCCAGTTTGATGCCGTGACGGTCTATTACTTTCCCAGGGCGCAAGGCTTTACTTGCGTACCTTCTCAGGGCGGCAGCACCCTGGGCATGAGCGCGACGCATACGCACGCCGAGAGATTTTCGCTGTCGGAGCACGCTGCCGAACAGCGCCGAATTCATCGCGCGCGTCTCGCGCAGCTGCGCTCCGAGCGCAGCTGTGCGACCAACTGCGTGACGAGCGAGACGGCGTCGAGCTCCGAGGATCCAAGCGACGACACGGACGAGGAGCCGAGCGACAATGAGGAGCTCGACATCGACAGCTATTACTTCCTGCAGCCGGTACCCACGTGGCAGCGCCGGGCGTTGCTGCGCGCCGCCGGCGTCCGGAGAATAGACGCCGTCGAGAAGGACGAATGCCGCGATATACGCGCCAGCCGAGAGCACTGCGGTTGCGGGTGCAAGGGCTACTGCGATCCCGAGAGCTGCCCTTGCAGCAGGGCCAACGTCAAGTGTCAGGTGGATCGGCCGGGATTTCCTTGCGGTTGCACGCGCGACGGCTGCGCGAACAATTCGGGCAGGATCGAATTCAACCCAGTGCGGGTGCGAACACACTTCATTCACACGTTGATGCGACTAGAACTGGAAAAGAAGCAGCGCGAGGAGGAGGGCGGCGGCGAACACGATCGTGTGACGGACAATCAAGGGCAAGGCGGCCGGGCTGGCGGTCCCCTGAGAGAAATCGGTTCCCTGGGTTCCGTCATGGACACCGGAGGCGGTGACGCGTGCGCGCTTCCGGGCGCGGGGCCAGGAGGCGGGGGCGGGTTCACGACCTTGCACTACGAAACGGGTCACGACGGCGGCGTGGTGACGGCCGGTTGTCAACCGGAAGTGCCCGGCACGCGGGAGGACAGTCTGGACCTGTACGCGATCAGGGACGACTGTTACGCGAGCGAGGACGCGGTGGACGGCAGCCAATCGGTGGTCGGGGTGCAGCGTAAGCTTCACCCGGAATTCAGTCAAACCTTCCAGAGTTTTTCGCAGAATAGCGGCGGCGGAGGTGGCGcgggcagcggcggcggcggtggaggTGGCGGCATGAGCTTCCAGCAGTCCTCGTATCAGGACTACGGATCGCCGTACGCGAGTCTGCCGTCCACGTCGCGAGTACCGCAGTTCCAGCCGGCGCAGTTCCAGTCGCCGAACAATCCGGCCGCGTTCGCGCATTACGGGCCTTACGGCGGCGCCCAGGACGCCGCCAACGCCGCGGCGCTTCAAGGTGCCTGCGCGCAAGCACATCAGAATGTTCAACAGCCaccgcagcagcagcaacagcagcagcagcagcagcagcagcagcagcaacagcagcagcagcagcagcagcagcagcactCGTCGTACGAATCGACGGTGTTCGCGCAGGAGGACGCCGCGAGTGCCGCGCAATATACCAATCTCACTAACTCGGTGCAGCCGATGAGCGCGAGCGTGGTGCAGCAGATGCAGCAGGGCAAGCTCGAGCCGTTCTCGGAGCTGCTGAGCGGCCGGTACTCGTACTACGGCGAGATGCACGAGCCGCagccgcagcagcagcaaccgCAGCCGCagccgcagcagcagcagcatcatCATCACGGCACTTACGGCACTCACGGTGGTCACGGGACGGTCGGCAAAGTTGTGGAGATGGTCGAGCCCGTCCAGGTGACCGGCGAGCAGCAGTCTTCGGCCGCGGCCGAAGACTGCGATGAGAATTTCGGCGAAATCATCAAGAAATCCATGGTGGAGACCGTGTCCGCCTAG
- Protein Sequence
- MAETPEMESPSARQDCLVEAQEDSTSVEPEPGSALPPSETTSSTTAAATPPAADDVAEDERRSVMQNSCENLVMVCERLDEKPDDAGRPEDEQSSDCSRALKQEAEKEVDMGPKMGKEVGEEDEGDSTEEPLEPEEPSKVNSEDAETETTASVSRKRPAGSDFLPIGAEIKRIGVEISEEEATQRRNDVRRLSPVLVSQRERTLGEVSLTAESCLFGMDNDGTGDDAESPSPQNEIKDAIVEKETLGRIDASPLTECASGNNEDISDRAIGKVNYDSEEEILGAASSASSRCNGFDGETAELRPDDVADANDEIAPCALTEKSIVEGMTSPTPSSPSCRRLMVVLNRCEEADLKKKEIEKLGKDACDRVAEKNSPESRSSVDEECDSQIKETPKKQRWQGDNNCSPTTRSKRSESMENVQSPDSSPVLKNCTVVLERMIEMRQQAHSDDAEEDARISKKVEKESAAPVAVIGKLGENEEVVLTSSSPADEDARASHELDSTETMPSSPEETQEAPPTDVAEAVDTETETETGSDSSEVSLSIAGIRELRDVDVASSELPCSEAERGELCCVEVAMAPIMTRLEAERPEPYTEDSAESLALATGARDEVRSDGSDSGLGNEIVGDPGPAPAPESDSETSFLDRLPDDILSDKEKGVNQLDSFAASSGASGTPGQPPLTSFRTLPAKSNLKRRLTDCMESDESRSNADEPVKKKRNIQFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRIHRARLAQLRSERSCATNCVTSETASSSEDPSDDTDEEPSDNEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRPGFPCGCTRDGCANNSGRIEFNPVRVRTHFIHTLMRLELEKKQREEEGGGEHDRVTDNQGQGGRAGGPLREIGSLGSVMDTGGGDACALPGAGPGGGGGFTTLHYETGHDGGVVTAGCQPEVPGTREDSLDLYAIRDDCYASEDAVDGSQSVVGVQRKLHPEFSQTFQSFSQNSGGGGGAGSGGGGGGGGMSFQQSSYQDYGSPYASLPSTSRVPQFQPAQFQSPNNPAAFAHYGPYGGAQDAANAAALQGACAQAHQNVQQPPQQQQQQQQQQQQQQQQQQQQQQQQHSSYESTVFAQEDAASAAQYTNLTNSVQPMSASVVQQMQQGKLEPFSELLSGRYSYYGEMHEPQPQQQQPQPQPQQQQHHHHGTYGTHGGHGTVGKVVEMVEPVQVTGEQQSSAAAEDCDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -