Lhum007253.1
Basic Information
- Insect
- Linepithema humile
- Gene Symbol
- -
- Assembly
- GCA_000217595.1
- Location
- NW:956-9098[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4 2.7e+03 -2.1 0.0 21 31 1084 1094 1074 1098 0.81 2 2 5.2e-08 3.5e-05 23.1 0.1 2 43 1451 1494 1450 1497 0.91
Sequence Information
- Coding Sequence
- atggaGAAATCCACGAGTAAATCTACGCAAAATGAAACTGATACGTTGACAACTCCCATGTATTCGTCTCTTTCACGTATTCATATCGAATCGGAGGAATCGAAatacattgttaaaaaatcaatttgcaatttgtcTTTTTCAATCAACTTTGACTTTAATGATGTCAATAGCGAAAATTCTACTGATTCCGAAAATGCCGATTTACAAATAGATATATCTGAAGTAGATAACTATGATTTATCTAGCAAGCATAAAAGAGAAGCTATTGACGAAGCATCGGTACTTAATGAAATGGAAGAAGAGATTGAAAGACAACTTGATGCTAAAGCTGCCAAAACTAATTTAACTGCCACTAATGttaagaatatattgaaacatGTAATCCCTTATGAGCATTTAATGACAATGATACAAAAATGGCTTCAAGATACAGTGAACGACAACTTTGGACCTAAACTGACAAGAGCTAAAGCCAAAAAATTAGCAGCTGAAAAACTCAATATACCATGGCCTATTACTACAGCACAAAAAACTTCTTCAGAAGTACAAGTGTTAATTCAAGAGGAATTACCAGAAGATTCGTCTGATGAAGAATATAATCCTGAGCATGATAAACAGAGTGATGATGATAGAGAAGAATATATAGAACATGTAGAGAATACATCAAGTAGCGATGTAGAGTCACAAACATCAATGtcaaagaataataaagatacaaCTTCTGAATCACAAACATCATCACACGTACAATATGATCCTGAAGGAATTTTCAAGATACCAGTtgtACCACCTGTTTCGACGGTAGAAGAGAGTATTGGTCAAAGAACACGTTCTAAATTATCCTTAAGCGAAACTTCTTTAGAGGAAATAGAACAAGCATTTATACCACCTGATATAACTGCTGATATGACTGATTGGGATTGCGATCTTGATGAAGACTGggataatttcttaaaagaatTTACTAAACCCTTGAGACAAGAACCAATTATAGAAGATGATCCAGAAGCAGATCCAGAATATAACATCTTGGAGGATGAGGAAACAGATTTATtggACAAGGAAGAGCTCAGGACAGATAAAGCAGTAGAAGTTCCTCGTGAAGAACCATATGATTTAATTGCAGAATTGCTCGAATTAACTCCTATGTTTTTAACACAAGAAGAAGAGCAAGAAATAtctagaaaaaagaaaactccaTATAACATAACTCCGccaattgataataatactatggATTGTTCTATGGCGGAACTGTTACCAGCACTTGCAGAACCTGAACAGCCATACTTAATGAAACCTGAACAGCATCTTTTATTAGCTACACAATTTCGGCAACATGTACAATTAATGACACAACACTTTGCTATGACTTTTATGCATCCGGAATATCATTACCTATCAGAAATATGCAAGCAGAACTTAATTGGCTTGAGACATTTAGGTACTGGGCCTAATTCTGCATTTAACGTGGAAAATTTAGAAGAAGCTTTAAAACTAGTGTCAACTTGGGAGCACAACTTTTCTGATgttaaattctatataaactTGAAAAAGAATACAACAATGGACATTCATAAAACTAAATCGTATCGTGTAAATAAGTACAGAGATATTGATCCATTTCATCCTGAGttagagaaattatttgttgaaagTAAGGCTCTTATGTACCCGCAACTTCTACCACATATGCCTTTTATAAATGGATTTAAAAGTCATGTCAAAAGTgccaaatatttcaaatcgGAAGAAACcTTAATTGCGTTGGGTATAGAACAGTTTTTACCGTTTGTTGCATCtaaaccaaaaaaatttaaaagtaaacaaaTGCAATTAAGTGATGCAGTTCAACTTATTTGCCATTATATGTTACCATGCAGAGATGCGCAAGGagtattatatcatattaaaaaacgtCGTGTTGCTAAAGATTCCAATCCAATtaaacattattttgaaaaaacacGCGCTCCTACTATAATACATTACATAACAACGGAAAATACTCCAAAAGCTCCAAAAGATCAACCAATGGAGTTTCTACCTCTAAGATGGCAAACATATCTCAGTAATcaaaacaattataaaaacaatttggtAAAAAGTACATATATACTTGATTCAAATGGTAATCTTGGGAAAGCGATAAACATGAATTCAATCGTGAGATCATATCCCAGTGTTTCTAATAATCATCCCTTGCGAAATCCAGTTGTAAATATGTTGCCAAAAATATTACCTGCAACTTTAAACCCCAGAGCTACTTCAACTTCGGATAAGGTTGATACTTccattaaaagaaattctaaACTCAACGATAACAACGATGGCAACGAGAAAAACACATTTGATAATGTTCAGAGCCCTGAGGTGCATGTAGAAACGAATAAAACGCACATAAGTCTCCGTAGCTCTTCAAAAAGGAATAATGCAGATGTAAAGGCAAAGCAGACAGATAAATTGCTAGACAAAAATGATACTATAGTAACTAGAAGCTCAAAAgtatctgaaaatttatcacaaatgtCAGCAGCGTCACCACAAATACGTAAGACTACGCCCCGATTagcaaaaatgaaaagtgCTCAAAATATGAAACTGATGGCACAAGCTTTAGGTTCAAAAAGTTCATCTACTTCTGGTACCTTAAAATCTAAAGAAAAGGATAACGCTGATAAAAACAACGATGAACATTGTGCTGTGTCAAAAGTTGACAATGAAGAAGAAATAGCAGAATTAATGCTGGCCAGTAccacaataataaaagatcCTGTGAGTAGGAAAAAGGCTAAACAAACTAGAGAattggaaattattaaaagattactGAAAGCTGAAGACCCATTAACTGAAGAAGAACGTGAAGCAAaATTTGCAGCATCGTATCTTCAAAAACTGCATTTGACAGTTCAATCTAATAATCCAGAAACATTTAAAGCCGTGATACAATTGTATTTAGACTACAGtgagaaattagaaaatattaaccaAGCAGTTGTTGATGCATCGTTTCCTGAAGAACTTTCAACGGAAACGTcacaaaataatgcaataaaaaaagacatacTAACAGTTCAATTGTATCAAGATATCTGCAAAAAGTTGCAGAATTATCCAGAAATGTGTTCagattttctgttatttttaaagccACATCAAGCCGCAATGATTGGTAAATCCATAGAATATATGAtgttacaaaaaatgaaagattttgTTCATGttgcacaaatatattttgctaaaCAACCGTCACGGATAGCAAAAATGATGCAAGCCATTACACAACTTTCATCTGATCCGCACACAACTTTGGAAAATGTTCATGCTGTTATGAGTCCTGTTTTTAAAGGCCATCCATTCGTTATGGATTTATTCTTGCAAGTCCTGCCGACTGCAAAACCTCCTGAAAGCTTATTTGCACCTCACATGTTTGAAAACTTGACATGTCCATTAGGAccttatgataaaaatataacttatacTGAAAACGCACCAGAGTTATATGAGAATATAGAATTACCTACAATAGCTTATCAGGATGATCCATACGGTGGGGAGAATTGTAAGTGTGATTGTCACATGGACGAtgcaaatcttaaaaataattcagagCATTGTGTCTCCTGTGGTACACGGTTTCTTAATGGAAGGATTTATCTCCAAACTCCTGAAGGATTACGACCAGCGAAAATTACGTTTCCTGGCGAAGATCaggaaaaattggaaaatatcgCACGCGTATCGTTGAAAGTTGCTGACAAAGGTGTTCCGCCAATTTCATCTAAAAAACGACGAAAACCATCCAAAAATAATCCTAATCACGAAGATATTTGCCAGAAGCAATGCGTGACAAAGTACTTGCCActaaaagaaaatgaagataatgaaaaaacAATAGCAAAATCTAAGAAGAATGTCAAATTTGCACTTAAAGTAGATCAAGAtcaaagaaaagttttaaaaaggaGGAGCACTGCGGATGATGcaattgcgaataaaaaaatgcgtatGACTCAATGCAAGAATAAACGAGAAAAGAAGACTGAAGAAACAGACACTTTGTTAGAAACAGAAAGCAATGAACTTGATATTACGGAGCAAGAAAAACCAAATGAGTTTACTGAAATAGAAACCAAGAATTGTACGCAATTATCAATGCAAGATAATACATTAGATTCCGAAATCAATACACAAGTTGCTTTAGGTGTAAACAACAGCACAGATCGTAATCCAAaggttatatattttactttagatAATAGAAATGCAGGTATAGAAACGGTAGTTACGACAACGGCAATCGAAGATAGCGTGCAATCAAAGTCTCATTTAATGAACAGTAAACCATGGACACGTCAGGAAGATATGTTTCTACTACAAAGTATCAAGAAggaatattctgaaaattcaTTTCTACTCATTAgtgaacaattaaaaaatcgcaCGGTTAATcagGTGAAAGAGAGATGTCAAATTTTGCTTTCTTTACTcgagaaaatgttataa
- Protein Sequence
- MEKSTSKSTQNETDTLTTPMYSSLSRIHIESEESKYIVKKSICNLSFSINFDFNDVNSENSTDSENADLQIDISEVDNYDLSSKHKREAIDEASVLNEMEEEIERQLDAKAAKTNLTATNVKNILKHVIPYEHLMTMIQKWLQDTVNDNFGPKLTRAKAKKLAAEKLNIPWPITTAQKTSSEVQVLIQEELPEDSSDEEYNPEHDKQSDDDREEYIEHVENTSSSDVESQTSMSKNNKDTTSESQTSSHVQYDPEGIFKIPVVPPVSTVEESIGQRTRSKLSLSETSLEEIEQAFIPPDITADMTDWDCDLDEDWDNFLKEFTKPLRQEPIIEDDPEADPEYNILEDEETDLLDKEELRTDKAVEVPREEPYDLIAELLELTPMFLTQEEEQEISRKKKTPYNITPPIDNNTMDCSMAELLPALAEPEQPYLMKPEQHLLLATQFRQHVQLMTQHFAMTFMHPEYHYLSEICKQNLIGLRHLGTGPNSAFNVENLEEALKLVSTWEHNFSDVKFYINLKKNTTMDIHKTKSYRVNKYRDIDPFHPELEKLFVESKALMYPQLLPHMPFINGFKSHVKSAKYFKSEETLIALGIEQFLPFVASKPKKFKSKQMQLSDAVQLICHYMLPCRDAQGVLYHIKKRRVAKDSNPIKHYFEKTRAPTIIHYITTENTPKAPKDQPMEFLPLRWQTYLSNQNNYKNNLVKSTYILDSNGNLGKAINMNSIVRSYPSVSNNHPLRNPVVNMLPKILPATLNPRATSTSDKVDTSIKRNSKLNDNNDGNEKNTFDNVQSPEVHVETNKTHISLRSSSKRNNADVKAKQTDKLLDKNDTIVTRSSKVSENLSQMSAASPQIRKTTPRLAKMKSAQNMKLMAQALGSKSSSTSGTLKSKEKDNADKNNDEHCAVSKVDNEEEIAELMLASTTIIKDPVSRKKAKQTRELEIIKRLLKAEDPLTEEEREAKFAASYLQKLHLTVQSNNPETFKAVIQLYLDYSEKLENINQAVVDASFPEELSTETSQNNAIKKDILTVQLYQDICKKLQNYPEMCSDFLLFLKPHQAAMIGKSIEYMMLQKMKDFVHVAQIYFAKQPSRIAKMMQAITQLSSDPHTTLENVHAVMSPVFKGHPFVMDLFLQVLPTAKPPESLFAPHMFENLTCPLGPYDKNITYTENAPELYENIELPTIAYQDDPYGGENCKCDCHMDDANLKNNSEHCVSCGTRFLNGRIYLQTPEGLRPAKITFPGEDQEKLENIARVSLKVADKGVPPISSKKRRKPSKNNPNHEDICQKQCVTKYLPLKENEDNEKTIAKSKKNVKFALKVDQDQRKVLKRRSTADDAIANKKMRMTQCKNKREKKTEETDTLLETESNELDITEQEKPNEFTEIETKNCTQLSMQDNTLDSEINTQVALGVNNSTDRNPKVIYFTLDNRNAGIETVVTTTAIEDSVQSKSHLMNSKPWTRQEDMFLLQSIKKEYSENSFLLISEQLKNRTVNQVKERCQILLSLLEKML
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -